Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J24
(530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 353 7e-98
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 352 9e-98
SB_56| Best HMM Match : Actin (HMM E-Value=0) 352 1e-97
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 351 2e-97
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 347 3e-96
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 1e-65
SB_54| Best HMM Match : Actin (HMM E-Value=0) 224 3e-59
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 205 2e-53
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 172 1e-43
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 151 5e-37
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 109 9e-30
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 109 2e-24
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 8e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 47 1e-05
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.19
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.25
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 32 0.33
SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 31 0.77
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 31 0.77
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 30 1.0
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 30 1.0
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.4
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 1.8
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43) 29 3.1
SB_56732| Best HMM Match : rve (HMM E-Value=0.0016) 29 3.1
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 29 3.1
SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 29 3.1
SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25) 29 3.1
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 3.1
SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 29 3.1
SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23) 29 3.1
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 3.1
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_39511| Best HMM Match : rve (HMM E-Value=0.0016) 29 3.1
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 29 3.1
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26) 29 3.1
SB_54769| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_35733| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.058) 28 4.1
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11) 28 4.1
SB_15750| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5) 27 9.5
SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 27 9.5
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 353 bits (867), Expect = 7e-98
Identities = 166/173 (95%), Positives = 171/173 (98%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF
Sbjct: 104 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 163
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 164 TTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEA 223
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 224 MFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 276
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 352 bits (866), Expect = 9e-98
Identities = 166/173 (95%), Positives = 171/173 (98%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRM
Sbjct: 262 MFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRM 314
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 352 bits (865), Expect = 1e-97
Identities = 166/173 (95%), Positives = 171/173 (98%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 141 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 201 TTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEA 260
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRM
Sbjct: 261 MFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRM 313
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 351 bits (863), Expect = 2e-97
Identities = 165/173 (95%), Positives = 171/173 (98%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRM
Sbjct: 262 MFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRM 314
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 347 bits (854), Expect = 3e-96
Identities = 164/173 (94%), Positives = 171/173 (98%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 141 SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 201 TTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEA 260
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRM
Sbjct: 261 MFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRM 313
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 246 bits (601), Expect = 1e-65
Identities = 129/173 (74%), Positives = 136/173 (78%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIV+DS G + H + I ERGYSF
Sbjct: 142 SLYASGRTTGIVMDS------------GDGVSHTV---------------PIYEERGYSF 174
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEA
Sbjct: 175 TTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEA 234
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
L QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRM
Sbjct: 235 LLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRM 287
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 224 bits (548), Expect = 3e-59
Identities = 101/161 (62%), Positives = 126/161 (78%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
+LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF
Sbjct: 2186 ALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSF 2245
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
+TAE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E
Sbjct: 2246 QSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEP 2305
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 492
LFQPS LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2306 LFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 205 bits (500), Expect = 2e-53
Identities = 90/173 (52%), Positives = 122/173 (70%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F
Sbjct: 145 TLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAF 204
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TA+ E VR +KEKLCYV + EQE A ++ L + Y LPDG+V+ + ERF PEA
Sbjct: 205 NHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEA 264
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQP + +E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+
Sbjct: 265 LFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRL 317
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 172 bits (419), Expect = 1e-43
Identities = 80/87 (91%), Positives = 84/87 (96%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSF
Sbjct: 20 SLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSF 79
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEM 270
TTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 80 TTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 151 bits (365), Expect = 5e-37
Identities = 68/83 (81%), Positives = 76/83 (91%)
Frame = +1
Query: 280 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 459
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 460 KDLYANTVLSGGTTMYPGIADRM 528
KDLY+N VLSGG+TM+PGIADRM
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRM 87
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 109 bits (262), Expect(2) = 9e-30
Identities = 55/110 (50%), Positives = 76/110 (69%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F
Sbjct: 167 SLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITI 339
+++E EIVR IKE+ S S + Y LPDG +I +
Sbjct: 227 HSSSELEIVRTIKEE----------------SMESERQQYALPDGSIIEV 260
Score = 38.3 bits (85), Expect(2) = 9e-30
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 430 SIMKCDVDIRKDLYANTVLSGGTTMYPG 513
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 109 bits (261), Expect = 2e-24
Identities = 55/128 (42%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYS 186
SLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L + RG++
Sbjct: 771 SLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHN 830
Query: 187 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 366
FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E E
Sbjct: 831 FTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSME 890
Query: 367 ALFQPSFL 390
LF+P L
Sbjct: 891 PLFRPDLL 898
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.5 bits (165), Expect = 8e-13
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +1
Query: 34 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 213
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMET 121
Query: 214 VRDIKEKLCYVALDFEQEMA 273
+ IKE+ Y+ D +E A
Sbjct: 122 AKTIKERWGYICPDIAKEFA 141
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 331 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 507
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 508 PGIADRM 528
R+
Sbjct: 256 RDFGRRL 262
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 16 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 174
+A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 76 FANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 391 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERL 191
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 427 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+S++ C +D RK L N VL GGT M PG R+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRL 97
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 142 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 321
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 322 GQVITIGNERFRCP 363
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 34 TGIVLDSGDGVSHTVPI 84
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 361 PEALFQPSFLGMEACGIHET 420
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWRYFTHHETRRY 129
>SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 520 RQYQGTWWYHQTILCWRTSLY 458
R YQG WWY+Q +C LY
Sbjct: 262 RAYQGAWWYNQCHMCNPNGLY 282
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWRYFTHHETRRY 490
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SETK SV +R + + + W+W+ TRR+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWRYFTHHETRRY 126
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S+QSE K SV +R + + ++W+W+ TRR+
Sbjct: 226 STQSELKASVVERFNRTLKTWMWRWFTHKETRRY 259
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S+QSE K SV +R + + ++W+W+ TRR+
Sbjct: 59 STQSELKASVVERFNRTLKTWMWRWFTHKETRRY 92
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWK 400
S++SETK SV +R + + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +1
Query: 40 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 219
+V+D+G +H VP++ G + A+ R + +L E +F ++
Sbjct: 359 LVVDTGYSFTHIVPVFNGKVIKKAVRRQ-----------LHVLDE---TF-------VIN 397
Query: 220 DIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 321
+KE CYV+ F ++M A +++ + Y LPD
Sbjct: 398 QVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S+++ETK SV +R + + + W+W+ TRR+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWRYFTHHETRRY 133
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWRWFTHRETRRY 226
>SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43)
Length = 1803
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 628 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 661
>SB_56732| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 236
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 54 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 87
>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 232 STRSELKASVVERFNRTLKTWMWRWFTHRETRRY 265
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 1475 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 1508
>SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 91 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 124
>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1725
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 485 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 518
>SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 346
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 285 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 318
>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1847
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWK 400
S+++ETK SV +R + + + W+W+
Sbjct: 902 STKNETKASVVERFNRTFKGWMWR 925
>SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 182 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 215
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 430 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 463
>SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 171 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 204
>SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23)
Length = 346
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 206 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 239
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 226 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 366
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1761
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 176 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 209
>SB_39511| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 850
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 54 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 87
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVASTRRH 424
S++SE K SV +R + + ++W+W+ H
Sbjct: 724 STRSELKASVVERFNRTLKTWMWRWFTYKETH 755
>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
Length = 1058
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 238 STRSELKASVVERFNRTLKTWMWRWFTHKETRRY 271
>SB_54769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 510 RVHGGTTRQYCVGVQVFTDVNVTLHDGVVCRLVDATSFHTQERGL 376
R H + + CV +V T V V H +V L T+ HT R L
Sbjct: 77 RFHTRVSTRVCVYTRVRTHVRVRFHTRLVPLLQTITNKHTTSRSL 121
>SB_35733| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.058)
Length = 448
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 514 YQGTWWYHQTILCWRTSLYGCQRHTS*WSCMSSRGCHKLPYPRTR 380
Y T +YH T + T Y HT C ++R CH +PY T+
Sbjct: 331 YHTTQYYHYTNMSHNTVSY----HTI--PCHTTRTCHTIPYHTTQ 369
>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 513 TRVHGGTTRQYCVGVQVFTDVNVTLHDGVVCRLVDATSFH 394
T HG T+ QY + T +VT H +V R V TS+H
Sbjct: 307 TSTHGVTSHQYLASRHISTWRHVTSHQHLVSRSV--TSYH 344
>SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11)
Length = 357
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLVA--STRRH 424
S++SE K SV +R + + ++W+W+ TRR+
Sbjct: 212 STRSEFKASVVERFNRTLKTWMWRWFTHKETRRY 245
>SB_15750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 275 VAISCSKSSAT*QSFSLMSRTISRSAVVVNE 183
V I+ +SS T ++FSL +T +RSAV N+
Sbjct: 129 VTINLKRSSTTFEAFSLELQTTNRSAVQGND 159
>SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5)
Length = 370
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 142 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS-SSSLEKSYELP 318
++D L+K + Y+ T ER++ ++C+ ++E ++ +S S+S ++
Sbjct: 128 ISDSLLKEEIDLSYALTLFDERDLKAHGNSEVCFQEAGSDRENSSPSSHSNSASENNNSA 187
Query: 319 DGQVITIGNERFRCPEALFQ 378
Q+ + + +C ++LFQ
Sbjct: 188 SSQINALDHNIRKC-DSLFQ 206
>SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = +1
Query: 400 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 519
A H+ T + + + + +Y N ++ GT+ +PG++
Sbjct: 636 ALNFHDETGDILQSVTLKVGHVIYGNVLIPSGTSSFPGLS 675
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 SSQSETKGSVAQRLSSSPRSWVWKLV--ASTRRH 424
+++SE K S+ +R + + ++W+W+ TRR+
Sbjct: 1500 TTRSEMKASIVERFNRTLKTWMWRWFTHGETRRY 1533
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,464,807
Number of Sequences: 59808
Number of extensions: 364092
Number of successful extensions: 1327
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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