Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J24
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         363   e-102
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         363   e-102
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         363   e-102
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          341   1e-95
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   1.6  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   4.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   4.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   4.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.4  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   6.4  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  363 bits (893), Expect = e-102
 Identities = 173/173 (100%), Positives = 173/173 (100%)
 Frame = +1

Query: 10  SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
           SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201

Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
           TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 261

Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
           LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 314


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  363 bits (893), Expect = e-102
 Identities = 173/173 (100%), Positives = 173/173 (100%)
 Frame = +1

Query: 10  SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
           SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201

Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
           TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 261

Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
           LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 314


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  363 bits (893), Expect = e-102
 Identities = 173/173 (100%), Positives = 173/173 (100%)
 Frame = +1

Query: 10  SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
           SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201

Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
           TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 261

Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
           LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 314


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  341 bits (837), Expect = 1e-95
 Identities = 161/173 (93%), Positives = 167/173 (96%)
 Frame = +1

Query: 10  SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
           SLYASGRTTG+VLDSGDGVSHTVPIYEGYALPHAILR+DLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSF 201

Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
           TTTAEREIVRDIKEKLCYVALDFEQEM  AA+SSS EKSYELPDGQVITIGNERFR PEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMQAAAASSSSEKSYELPDGQVITIGNERFRAPEA 261

Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
           LFQPSFLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRM 314


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 26  VVPPVSCWIPAMVYPTQYPSTRVTP 100
           +  PV+   PA+  PT+ P TR +P
Sbjct: 476 IAHPVTVPRPAITAPTRVPQTRTSP 500


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 106 AVGRNPRRWVLCGIHHRRNPARYR 35
           A G   RRW   G   RR P  YR
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYR 133


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 106 AVGRNPRRWVLCGIHHRRNPARYR 35
           A G   RRW   G   RR P  YR
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYR 133


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +1

Query: 193 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL-EKSYELPD--GQVITIGNER 351
           T   R ++    E+  Y +    Q  ++++SSSS  + SYE     G ++ I  +R
Sbjct: 93  TKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSFQQSSYESESGAGSIVQISPQR 148


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 110 ACGRA*PS*MGTVWDTPSPESSTIPVVRP 24
           A G+A  + +GT   TP+  ++  PV RP
Sbjct: 13  ATGKAASAVIGTTQSTPATAAAPQPVQRP 41


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 110 ACGRA*PS*MGTVWDTPSPESSTIPVVRP 24
           A G+A  + +GT   TP+  ++  PV RP
Sbjct: 13  ATGKAASAVIGTTQSTPATAAAPQPVQRP 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,813
Number of Sequences: 2352
Number of extensions: 11703
Number of successful extensions: 43
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)