Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J24
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 355 1e-98
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 355 1e-98
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 354 2e-98
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 354 2e-98
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 354 2e-98
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 354 2e-98
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 353 3e-98
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 353 3e-98
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 353 3e-98
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 353 3e-98
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 334 3e-92
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 206 1e-53
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 196 8e-51
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 115 2e-26
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 82 3e-16
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 82 3e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 60 1e-09
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 30 1.2
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 3.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 4.8
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 28 4.8
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 6.3
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 355 bits (872), Expect = 1e-98
Identities = 167/173 (96%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 355 bits (872), Expect = 1e-98
Identities = 167/173 (96%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 354 bits (871), Expect = 2e-98
Identities = 166/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 354 bits (871), Expect = 2e-98
Identities = 166/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 98 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 157
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 158 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 217
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 218 LFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 270
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 354 bits (871), Expect = 2e-98
Identities = 166/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 128 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 187
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 188 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 247
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 248 LFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 300
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 354 bits (871), Expect = 2e-98
Identities = 166/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 LFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 353 bits (869), Expect = 3e-98
Identities = 165/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 MFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 353 bits (869), Expect = 3e-98
Identities = 165/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 MFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 353 bits (869), Expect = 3e-98
Identities = 165/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 MFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 353 bits (869), Expect = 3e-98
Identities = 165/173 (95%), Positives = 172/173 (99%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRM
Sbjct: 262 MFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 334 bits (820), Expect = 3e-92
Identities = 156/173 (90%), Positives = 165/173 (95%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+F
Sbjct: 141 SLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTF 200
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE
Sbjct: 201 TTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEV 260
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRM
Sbjct: 261 LFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRM 313
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 206 bits (502), Expect = 1e-53
Identities = 92/173 (53%), Positives = 121/173 (69%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F
Sbjct: 145 TLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
+A+ E VR +KEKLCY+A D EQE A ++ L + Y LPDG+VI +G ERF PE
Sbjct: 205 NHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEI 264
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R+
Sbjct: 265 LFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRL 317
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 196 bits (478), Expect = 8e-51
Identities = 94/173 (54%), Positives = 121/173 (69%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F
Sbjct: 145 SLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
+ E EIVR++KE CY+ALD T ++S++ SY LPD I I N FR PE
Sbjct: 205 HRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEV 259
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+
Sbjct: 260 LFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRL 312
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 115 bits (276), Expect = 2e-26
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Frame = +1
Query: 34 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 213
TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEV 230
Query: 214 VRDIKEKLCYVALDFEQEMAT-AASSSSLEKSYELPDGQV-----ITIGNERFRCPEALF 375
+ IKEK CYV D +E ++ ++Y+ + + +G ERF PE F
Sbjct: 231 AKMIKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFF 290
Query: 376 QPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
P F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++
Sbjct: 291 HPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKL 342
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 105 bits (251), Expect = 3e-23
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Frame = +1
Query: 13 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---Y 183
LYA TTG+V+D G+ V+ VP+ +GY + AI + + + D L L+ Y
Sbjct: 315 LYAYDVTTGVVVDIGERVN-IVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLY 373
Query: 184 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERF 354
+F + E+ I+R E+ YV D+++E + + SL+ P Q I N RF
Sbjct: 374 AFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRF 433
Query: 355 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++
Sbjct: 434 LCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKL 491
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 81.8 bits (193), Expect = 3e-16
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Frame = +1
Query: 1 ARGSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 180
A+ S + +V+DSG + G + +++R+D+ G+ LT+ L ++ R
Sbjct: 133 AKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR- 191
Query: 181 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV- 330
+ E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 192 -QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVK 250
Query: 331 ------------ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 474
I +G ERF PE LF PS + ++ CG+ E SI +C +R L
Sbjct: 251 DVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAE 310
Query: 475 NTVLSGGTTMYPGIADRM 528
N ++ GG++ +PG +R+
Sbjct: 311 NIIVIGGSSCFPGFRERL 328
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 81.8 bits (193), Expect = 3e-16
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Frame = +1
Query: 1 ARGSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 180
A+ S + +V+DSG + G + +++R+D+ G+ LT+ L ++ R
Sbjct: 133 AKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR- 191
Query: 181 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV- 330
+ E ++ + KE LC+V+ +F++ M A + ++ K Y +PD G V
Sbjct: 192 -QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVK 250
Query: 331 ------------ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 474
I +G ERF PE LF PS + ++ CG+ E SI +C +R L
Sbjct: 251 DVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAE 310
Query: 475 NTVLSGGTTMYPGIADRM 528
N ++ GG++ +PG +R+
Sbjct: 311 NIIVIGGSSCFPGFRERL 328
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 60.1 bits (139), Expect = 1e-09
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
S +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 164 SCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDV 223
Query: 190 TTT---AEREIVRD-------IKEKLCYVALDFE--------QEMATA---ASSSSLEKS 306
T +E V + ++ L V ++ ++MA +S++
Sbjct: 224 IPTYRIGGKEEVNEGEAPKWTPRKNLPQVTKSYDAFMKKMLLEDMAATMLQLCDTSIDMD 283
Query: 307 Y--ELP-------DGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKC 444
Y +LP +G G ER + PE LF +L E + + S
Sbjct: 284 YVDKLPSTPYAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLA 343
Query: 445 DVDIRKDLYANTVLSGGTTMYPGIADRM 528
D+DIR L++N ++GG ++ G +R+
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERL 371
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 433 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
+ KC +D+RK L+ N +L+GG + PG+ R+
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRL 229
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 TRPVVPPVS-CWIPAMVYPTQYPSTRVTPYRTPSCV 121
TRP P++ W P +VY Q+P R+ P +P C+
Sbjct: 43 TRPRKSPLNENWKPDVVYLYQFPRARLLPNLSPFCM 78
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 460 YGCQRHTS*WSCMSSRGCHKLPYPRTRAGREP 365
+ CQRH SC G H PY + R P
Sbjct: 423 WNCQRHAGFESCSCDDGYHLSPYDKKTCLRSP 454
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 65 TPSPESSTIPVVRPDAYSEP 6
TP P SST+PVV P ++P
Sbjct: 865 TPQPLSSTMPVVAPSTSTQP 884
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 456 DVNVTLHDGVVCRLVDATSFHTQERGLEESLWATEPFVSDCDDLTVGE 313
DV+ TLHD V RL D + + RG+ SL+ P C D+ V E
Sbjct: 587 DVHKTLHDIVHMRLGDNKAKSDEGRGI--SLFDAIPNTRTCADVIVPE 632
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 30 YHRYRAGFRRWCIP 71
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 489 RQYCVGVQVFTDVNVTLHDGVVCRLVDATSFH 394
R C+ V++ D H GV+C SFH
Sbjct: 23 RLVCIKVRMLDDTVAVFHLGVICFFFCVVSFH 54
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 124 PDAGWRAVGRNPRRWVLCGIHHRRNPARYRWYDRTRTVSL 5
PD + RNP+ + HH RN Y W + T V L
Sbjct: 160 PDTKYIYCVRNPKDCLTSYFHHNRNFKIYNWANGTWDVFL 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,325,431
Number of Sequences: 27780
Number of extensions: 245642
Number of successful extensions: 900
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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