Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J24
(530 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 332 9e-92
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 329 6e-91
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 329 6e-91
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 325 1e-89
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 323 4e-89
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 323 4e-89
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 323 4e-89
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 319 8e-88
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 318 2e-87
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 312 7e-86
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 274 3e-74
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 263 4e-71
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 191 3e-49
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 97 5e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 97 5e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 2e-20
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 87 5e-18
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 77 6e-15
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 67 6e-12
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 55 3e-08
At3g13225.1 68416.m01660 WW domain-containing protein contains P... 29 2.6
At5g43500.2 68418.m05318 expressed protein 28 4.5
At5g43500.1 68418.m05319 expressed protein 28 4.5
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 28 4.5
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 6.0
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 27 6.0
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 7.9
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 7.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 332 bits (816), Expect = 9e-92
Identities = 156/173 (90%), Positives = 164/173 (94%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TT+AEREIVRD+KEKL Y+ALD+EQEM TA +SSS+EKSYELPDGQVITIG ERFRCPE
Sbjct: 203 TTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 263 LFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 329 bits (809), Expect = 6e-91
Identities = 154/173 (89%), Positives = 164/173 (94%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
L+QPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 263 LYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 329 bits (809), Expect = 6e-91
Identities = 154/173 (89%), Positives = 164/173 (94%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKLCY+ALD+EQE+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
L+QPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 263 LYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 315
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 325 bits (798), Expect = 1e-89
Identities = 155/173 (89%), Positives = 162/173 (93%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKL YVALD+EQE+ TA SSSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM
Sbjct: 263 LFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM 315
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 323 bits (794), Expect = 4e-89
Identities = 152/173 (87%), Positives = 163/173 (94%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRM 315
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 323 bits (794), Expect = 4e-89
Identities = 152/173 (87%), Positives = 163/173 (94%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRM 315
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 323 bits (794), Expect = 4e-89
Identities = 152/173 (87%), Positives = 163/173 (94%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRDIKEKL +VA+D+EQEM T+ +SSS+EK+YELPDGQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM
Sbjct: 263 LFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRM 315
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 319 bits (783), Expect = 8e-88
Identities = 151/173 (87%), Positives = 161/173 (93%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRD+KEKL Y+ALDFEQE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM
Sbjct: 263 LFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRM 315
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 318 bits (780), Expect = 2e-87
Identities = 150/173 (86%), Positives = 161/173 (93%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TTTAEREIVRD+KEKL Y+ALD+EQE+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE
Sbjct: 203 TTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEV 262
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM
Sbjct: 263 LFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRM 315
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 312 bits (767), Expect = 7e-86
Identities = 143/173 (82%), Positives = 160/173 (92%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++
Sbjct: 144 SLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTY 203
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TT+AEREIVRDIKEKLCY+A+D+EQEM A +SS+++++YELPDGQVITIG ERFRCPE
Sbjct: 204 TTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEV 263
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQ S +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM
Sbjct: 264 LFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRM 316
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 274 bits (671), Expect = 3e-74
Identities = 131/173 (75%), Positives = 148/173 (85%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SL+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY
Sbjct: 98 SLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY-- 155
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
T+AERE+VRDIKE+ Y+ALD+EQEM A SS+++++YELPDGQVITIG ERFRCPE
Sbjct: 156 -TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEV 214
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LFQPS +GME GIHE TYNSIMKCD DIRKDLY N VLSGGTTM+ GI +RM
Sbjct: 215 LFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERM 267
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 263 bits (645), Expect = 4e-71
Identities = 119/172 (69%), Positives = 143/172 (83%)
Frame = +1
Query: 13 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 192
LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++T
Sbjct: 133 LYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYT 192
Query: 193 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 372
T+AEREIVRDIKEKLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CPE L
Sbjct: 193 TSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVL 252
Query: 373 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
FQPS +G E+ GIHE T NSI+KC VD R+D+Y N +++GGTTM GI +RM
Sbjct: 253 FQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERM 304
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 191 bits (465), Expect = 3e-49
Identities = 83/173 (47%), Positives = 122/173 (70%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+
Sbjct: 142 TLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAM 201
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
TA+ E VR+IKEKLCY++ D+++E ++ L K+Y LPDG+VI +G ERF+ PEA
Sbjct: 202 NKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEA 261
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
LF P + +E G+ + + I + D+D R LY + VLSGG+TMYPG+ R+
Sbjct: 262 LFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRL 314
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 97.5 bits (232), Expect = 5e-21
Identities = 64/172 (37%), Positives = 84/172 (48%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 189
SLYA GR +G +D G G P+ EG A R +L G +LT + L + S
Sbjct: 129 SLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSM 188
Query: 190 TTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEA 369
+ V +KE+ A E E+A + + + + LPDGQVI+IG ER+ EA
Sbjct: 189 NLSMSD--VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEA 243
Query: 370 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 525
LFQPS LG+E GI E I + + L NTVL GGTT G R
Sbjct: 244 LFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESR 295
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 97.5 bits (232), Expect = 5e-21
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 42/213 (19%)
Frame = +1
Query: 16 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG----- 180
+A+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRP 226
Query: 181 -YSF-------------------TTTA-----EREIVRDIKEKLCYVALDFEQEMATAAS 285
YSF TT + +R IV DIK+ +C V + +
Sbjct: 227 RYSFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVP---DTPYDDKSY 283
Query: 286 SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL----GME--------ACGIHETTYN 429
S+ SYELPDGQ + IG +RF+ P+ +F PS + GME G+
Sbjct: 284 SNIPTTSYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVME 343
Query: 430 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
SI KCDVDIR++LY++ +L+GGT+ + +R+
Sbjct: 344 SINKCDVDIRRELYSSILLAGGTSSMQQLKERL 376
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 2e-20
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Frame = +1
Query: 1 ARGSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 180
A G + TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG
Sbjct: 162 AAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
Query: 181 YSFTTTAEREIVRDIKEKLCYVALD----FEQEMATAASSSSLEKSYELPDGQVIT--IG 342
+ ++ R +KE CY D F + A K + G T +G
Sbjct: 222 ENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVG 281
Query: 343 NERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 519
ERF PE F P + + I +D R+ LY N VLSGG+TM+
Sbjct: 282 YERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFG 341
Query: 520 DRM 528
R+
Sbjct: 342 RRL 344
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 87.4 bits (207), Expect = 5e-18
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYS 186
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 187 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 366
F + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E
Sbjct: 303 FQSLYT---VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGE 354
Query: 367 ALFQPSFLGMEACGIHETTYNSIMKCD-VDIRKD--LYANTVLSGGTTMYPGIADRM 528
LFQP GM A +H+ + CD + D + VL+GG+ PG+++R+
Sbjct: 355 ILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERL 411
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 77.4 bits (182), Expect = 6e-15
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = +1
Query: 40 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 219
+V+D G +H VP+ + L HAI R+DL G+ T+YL ++++ R S E +V
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVD 212
Query: 220 DIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDGQVITIG 342
D KEKLC+V+LD +++ A + ++L KS Y LPDG T G
Sbjct: 213 DAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/111 (29%), Positives = 58/111 (52%)
Frame = +1
Query: 196 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 375
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 376 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRM 528
QP+ LGM G+ E +I C ++ LY + +L+GG+T++P + +R+
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERL 358
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 67.3 bits (157), Expect = 6e-12
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYS 186
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 187 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 366
F + VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E
Sbjct: 303 FQSLYT---VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGE 354
Query: 367 ALFQPSFLGM 396
LFQP G+
Sbjct: 355 ILFQPRLAGI 364
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 54.8 bits (126), Expect = 3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Frame = +1
Query: 202 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP---DGQVITIGNERFRCPEAL 372
E E+ R + +L + F Q++ S +S E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 373 FQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTMYPGIADRM 528
F P+ +G++ G+ E SI + + ++ + L ++ +++GG ++ PG+ +R+
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERL 657
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/86 (27%), Positives = 45/86 (52%)
Frame = +1
Query: 13 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 192
L+ + GIVL G +H++P +G + R ++ G +TDYL ++L+ + +
Sbjct: 163 LHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHS 222
Query: 193 TTAEREIVRDIKEKLCYVALDFEQEM 270
+ E D+K + CY+A D+ E+
Sbjct: 223 SRFTWEKAEDLKLEHCYIAPDYASEI 248
>At3g13225.1 68416.m01660 WW domain-containing protein contains Pfam
profile PF00397: WW domain
Length = 863
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 80 GTVWDTPSP-ESSTIPVVRPDAYSEP 6
G W P P ES +P PD+YSEP
Sbjct: 512 GEEWIPPPPSESEDVPPPPPDSYSEP 537
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 165
+++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 277 AVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 10 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 165
+++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 289 AVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 27.9 bits (59), Expect = 4.5
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +1
Query: 16 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 195
+ SG+T +V SG G S V + E + P++ ++ L G ++ +K L E+
Sbjct: 390 FPSGKTVAVVGGSGSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVN 447
Query: 196 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY--ELPDGQVITIG 342
I E + Y D AA+S++ S+ LP G +G
Sbjct: 448 QEPALFATTILENILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVG 498
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.5 bits (58), Expect = 6.0
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +1
Query: 25 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 204
G+T +V SG G S + + E Y P A L L GRDL Y ++ L R + E
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL--RSHMGLIQQE 1242
Query: 205 REIV-RDIKEKLCYVALD-FEQEMATAASSSSLEKSY-ELPDGQVITIG 342
I I+E + Y + E EM AA ++ LP G IG
Sbjct: 1243 PIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIG 1291
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 27.5 bits (58), Expect = 6.0
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 22 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 201
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 202 EREIVRDIKEKLCYVALDFEQ-EMATAASSSSLEK-SYELPDGQVITIG 342
IKE + D +Q E+ AA ++ +LPDG +G
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVG 501
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 139 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 243
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -1
Query: 488 DNTVLAYKSLR-----MSTSHFMMELYVVSWMPQASIPKNEGWKRASGQRNLSFPIVMT* 324
D T++A K L+ S F MEL ++S ++ + G+ SG+R L +P +
Sbjct: 324 DGTMVAVKRLKDINGTSGDSQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM--- 380
Query: 323 PSGS 312
P+GS
Sbjct: 381 PNGS 384
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,956,139
Number of Sequences: 28952
Number of extensions: 241467
Number of successful extensions: 880
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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