Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J23
(540 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 201 6e-53
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 200 1e-52
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 31 0.14
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 29 0.33
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 0.58
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 1.3
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 1.8
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.3
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 2.3
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 3.1
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 26 4.1
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 25 5.4
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 25 5.4
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 25 5.4
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 7.2
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 25 9.5
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 9.5
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 201 bits (490), Expect = 6e-53
Identities = 102/177 (57%), Positives = 126/177 (71%)
Frame = +1
Query: 10 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 189
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 190 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 369
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 370 LGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 540
+G KG K T +S+ +K+ +R SKV+ LE QF GRL A V+S
Sbjct: 121 MG-SKGKKATSTP-----NPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSS 171
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 200 bits (488), Expect = 1e-52
Identities = 102/177 (57%), Positives = 126/177 (71%)
Frame = +1
Query: 10 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 189
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 190 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 369
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 370 LGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 540
+G KG K T +S+ +K+ +R SKV+ LE QF GRL A V+S
Sbjct: 121 MG-SKGKKATATP-----TPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSS 171
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 30.7 bits (66), Expect = 0.14
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 22 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 195
RD +K + G K+ + EL +N + Q+ L+ S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 196 GNFAWGSECSTRKTRI 243
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 29.5 bits (63), Expect = 0.33
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 367 PLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGL 495
PL R+K +LT E + + S T+KK+ + + SK G+
Sbjct: 569 PLSRRKARQLTALELGVSPEALSSATSKKHNKKNKRSKQRSGV 611
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 28.7 bits (61), Expect = 0.58
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 313 VVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSK 480
V DA ++ E ++ +KK +KL EA+ K++ +K KK+ +R S+
Sbjct: 434 VTKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSE 489
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 112 WQPGDLTHTSSSYEWAHVC 56
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.1 bits (57), Expect = 1.8
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +1
Query: 103 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 282
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 283 RTKTLVKNAIVVVDATPFRQWYE 351
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 315 DNSILYQGFGTHQFIVRGIINNI 247
+NS+ +Q F +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.6 bits (56), Expect = 2.3
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +1
Query: 25 DHWHKRRATGGKRAPIRKKRKY---ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 195
D W +A G +PIR+ ++Y +L P K H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKF-RDNYHKQNKRNREAKERGIGIKV 816
Query: 196 GNFAWGSECSTRKTRIIDVVYNASNN 273
N S RK R + A NN
Sbjct: 817 -NSELKSAVEIRKARELKEKRLAKNN 841
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 351 FIPLPERCGIHHDNSILYQ 295
F+P PE C I+H+ I Q
Sbjct: 477 FLPAPEECNIYHNEHIQVQ 495
>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 2 HEGWVSVVIIGIRGGLRAANVRPFV 76
H+GW + +IG+ + + RPF+
Sbjct: 284 HKGWGKLCVIGVAAAGKTLDFRPFL 308
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 408 LSLSELGTFLPSEW 367
LSL+E GTFL EW
Sbjct: 1554 LSLNECGTFLQKEW 1567
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 208 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 381
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 382 K 384
+
Sbjct: 310 Q 310
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 5.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 2 HEGWVSVVIIGIRGGLRAANVRPF 73
H+GW ++IG+ + + RPF
Sbjct: 288 HKGWGQSIVIGVAAAGQEISTRPF 311
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 358 YLLPLGRKKGAKLTE 402
Y+LPLGRK K TE
Sbjct: 492 YILPLGRKTARKCTE 506
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 164 LPPRDLTKWMRWG-PSL 117
L P+D+ KW RW PSL
Sbjct: 32 LSPQDILKWCRWTLPSL 48
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 25 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 204
+ W K T K+ +KRK L R A +L + + + S+GG +A + ++
Sbjct: 32 EKWSKGVKTN-KKEQEAEKRKAALERKAERERLEKEEMESLPSKGGKGSKKAAKKNSSLD 90
Query: 205 AWGSE 219
A+ +E
Sbjct: 91 AFLNE 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,474,266
Number of Sequences: 5004
Number of extensions: 53287
Number of successful extensions: 150
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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