BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_J23 (540 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 325 2e-91 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.37 AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 4.6 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 4.6 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 4.6 AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 6.1 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.1 X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 8.1 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.1 AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 21 8.1 >AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 protein. Length = 208 Score = 325 bits (799), Expect = 2e-91 Identities = 148/177 (83%), Positives = 163/177 (92%) Frame = +1 Query: 10 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 189 MGISRDHWHKRRATGGKR PIRKKRK+ELGRPAANTKLGPQRIH VR+RGGN KYRALRL Sbjct: 1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRL 60 Query: 190 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 369 DTGNF+WGSEC+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DATPFRQWYE HY+LP Sbjct: 61 DTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLP 120 Query: 370 LGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 540 LGRK+GAKLTEAEE ++NKKRS+K KY +RQR +KVE LEEQF TGR+LAC++S Sbjct: 121 LGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISS 177 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 25.4 bits (53), Expect = 0.37 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = -3 Query: 532 HMLTAVQCGIAPPDHPLPWTGAACSGTS 449 H V + PP+ P+P +AC G++ Sbjct: 169 HQFQTVVASMDPPEPPVPTVTSACVGSA 196 >AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase protein. Length = 693 Score = 21.8 bits (44), Expect = 4.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -1 Query: 261 IINNINNTSLAG 226 +INN NNTS+ G Sbjct: 488 VINNRNNTSMKG 499 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 21.8 bits (44), Expect = 4.6 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 239 VLLMLFIMPLTMNWCVPKPW*RMLLSWWMPHL 334 VL + F P T N PW R + WMP L Sbjct: 333 VLNVHFRSPSTHNM---SPWVRQVFLNWMPRL 361 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 21.8 bits (44), Expect = 4.6 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -3 Query: 241 YESCGLNIQIPMRSFQYQD 185 YE CGL + PM SFQ D Sbjct: 653 YE-CGLRFEDPMISFQPGD 670 >AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. Length = 349 Score = 21.4 bits (43), Expect = 6.1 Identities = 6/20 (30%), Positives = 11/20 (55%) Frame = +2 Query: 239 VLLMLFIMPLTMNWCVPKPW 298 +L+ +MPL + W + W Sbjct: 85 LLVTFLMMPLEIGWAITVSW 104 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 21.4 bits (43), Expect = 6.1 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = +1 Query: 379 KKGAKLTEAEEAIINKKRSQKTAKKY 456 KKG+ +T+ +I + ++K K+Y Sbjct: 517 KKGSFVTQYVGEVITNEEAEKRGKEY 542 >X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor protein. Length = 283 Score = 21.0 bits (42), Expect = 8.1 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -2 Query: 536 ATHANSRPVWNCSSRPPSTLDRR 468 A N+RPV+ RPP RR Sbjct: 95 AEPGNNRPVYISQPRPPHPRLRR 117 Score = 21.0 bits (42), Expect = 8.1 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -2 Query: 536 ATHANSRPVWNCSSRPPSTLDRR 468 A N+RPV+ RPP RR Sbjct: 151 AEPGNNRPVYISQPRPPHPRLRR 173 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 21.0 bits (42), Expect = 8.1 Identities = 10/38 (26%), Positives = 20/38 (52%) Frame = +1 Query: 229 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 342 RK + +VVY N + + V + I ++ A+P ++ Sbjct: 358 RKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395 >AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. Length = 50 Score = 21.0 bits (42), Expect = 8.1 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = -3 Query: 529 MLTAVQCGIAPPDH 488 M+ A+ C I P DH Sbjct: 21 MIWALDCSIKPKDH 34 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 173,045 Number of Sequences: 438 Number of extensions: 3948 Number of successful extensions: 12 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15336375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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