Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J20
(513 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 203 1e-53
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 125 3e-30
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 111 8e-26
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 86 3e-18
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 83 3e-17
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 83 3e-17
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 79 5e-16
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 29 0.54
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 28 0.71
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 27 1.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 2.9
SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces... 26 2.9
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 3.8
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 26 3.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 5.0
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 25 5.0
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 25 6.7
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 25 6.7
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 203 bits (496), Expect = 1e-53
Identities = 107/181 (59%), Positives = 130/181 (71%), Gaps = 13/181 (7%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYL-MYHEPIPTAQLVQRVATVMQEY 184
+KV IT IGMVYSGMGPD+R+LV ++RK+AQ Y +Y+E PT LVQ +A+VMQE
Sbjct: 62 EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQES 121
Query: 185 TQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 364
TQSGGVRPFGVSLL+ G + P L+Q DPSG YFAWKATA+GK+ KTFLEKRY ++
Sbjct: 122 TQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDE 181
Query: 365 LELDDAVHTAILTLKEGFEGQMTADNIEV----------GICDASG--FRRLEPAHVKDY 508
LELDDAVHTAIL LKE FEG++T DNIE+ GI G F RL + ++DY
Sbjct: 182 LELDDAVHTAILALKETFEGELTEDNIEIAVVSTKPTDSGIVGVPGGHFCRLSQSEIRDY 241
Query: 509 L 511
L
Sbjct: 242 L 242
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 125 bits (302), Expect = 3e-30
Identities = 62/153 (40%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Frame = +2
Query: 11 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 190
K+ M+ H+ + ++G+ D R+L+ +AR AQ + L +P+ L + VA V Q+YTQ
Sbjct: 62 KIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQ 121
Query: 191 SGGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 364
SGGVRPFGVS LI G++ ++ P ++Q +P+G Y AWKATA+G+ + +LEK + E
Sbjct: 122 SGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEG 181
Query: 365 LELDDAVHTAILTLKEGFEGQMTADNIEVGICD 463
L D+ +H A+ +L E Q + NIE+ I D
Sbjct: 182 LSRDETIHLAVSSLLEVV--QTASGNIELAIMD 212
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 111 bits (266), Expect = 8e-26
Identities = 55/149 (36%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYT 187
+K+ I ++ +G+ D +L+ AR++ QQY ++E +P QLV+RV + Q YT
Sbjct: 63 EKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYT 122
Query: 188 QSGGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 364
Q GG+RPFGVS L GW++ R Y LFQ +PSG Y +W+A ++G N + ++ + + Y +D
Sbjct: 123 QYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDD 182
Query: 365 LELDDAVHTAILTLKEGFE-GQMTADNIE 448
+ LD+A A+ L + + +T + IE
Sbjct: 183 INLDEASAMAVKFLSKTLDSNSLTHEKIE 211
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 86.2 bits (204), Expect = 3e-18
Identities = 42/156 (26%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Frame = +2
Query: 2 HEDKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQE 181
++ K+ I HIG+ +G+ PD R+L ++ A ++ PIP +L+ +VA Q
Sbjct: 59 YQKKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQI 118
Query: 182 YTQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT- 358
TQ G RP+GV L+ G++ P+L + PSG + T+MG + +T++E+
Sbjct: 119 NTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDT 178
Query: 359 -EDLELDDAVHTAILTLKEGF--EGQMTADNIEVGI 457
D ++ + +A+ L++ + ++T +N+ + +
Sbjct: 179 FPDSSREELILSALRALRDTLSKDQELTEENVSISV 214
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 82.6 bits (195), Expect = 3e-17
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYT 187
+K+ I HIG SG+ D R ++ AR Q + Y EP Q + + +
Sbjct: 65 EKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFG 124
Query: 188 QSGG------VRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEK 349
+ RPFGV+LLI G + P L+ +PSG YF ++A A+G K+ L K
Sbjct: 125 EGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVK 184
Query: 350 RYTEDLELDDAVHTAILTLKEGFEGQMTADNIEVGICDASG 472
+ +D+ L++A + L++ E ++ + N+++ A G
Sbjct: 185 EFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEG 225
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 82.6 bits (195), Expect = 3e-17
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 5/168 (2%)
Frame = +2
Query: 23 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGV 202
IT IG V +G D R V++AR A ++ P+P L +R+A + Q TQ +
Sbjct: 70 ITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAM 129
Query: 203 RPFGVSLLICGWEND-RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED---LE 370
RP GV++ + +++ P LF+ DP+G Y +KAT+ G +LEKR+ +D
Sbjct: 130 RPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSN 189
Query: 371 LDDAVHTAILTLKEGFEGQMTADNIEVGIC-DASGFRRLEPAHVKDYL 511
L D V T I L + +++G+ D FR L ++ +L
Sbjct: 190 LTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKPFRVLSVEEIEAHL 237
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 78.6 bits (185), Expect = 5e-16
Identities = 39/129 (30%), Positives = 67/129 (51%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYT 187
+++ + HIG+ +G PD + +V +AR A + Y PIP + R+ +Q +T
Sbjct: 64 NRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFT 123
Query: 188 QSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 367
VRPFGV + ++++ P+L+ +P+G Y+ + A GK + LEK L
Sbjct: 124 CYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSL 183
Query: 368 ELDDAVHTA 394
++ DAV A
Sbjct: 184 KMKDAVKEA 192
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 28.7 bits (61), Expect = 0.54
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +2
Query: 212 GVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHT 391
G L++ G++ P+LF G+ A+G + LE +Y DLE H
Sbjct: 130 GAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLER----HE 185
Query: 392 AILTLKEGFEGQMTADNIEVGICD 463
A+ +KE E + D CD
Sbjct: 186 AMELVKEAIEAGIFNDLGSGSNCD 209
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 0.71
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -2
Query: 512 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPD 363
++S S VPVS RL K R + PS T + S QH V D
Sbjct: 455 QNSSSAPSVPVSAPRLSGKSASRNHVPSPPKGTKSPMASSEQAQHQQVID 504
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 27.1 bits (57), Expect = 1.6
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -3
Query: 205 TDAS*LSIFLHDGRHSLDQLRCGYRLVVHQVVLLG--HFPGLCDEQTIIRAHAGVHHSYM 32
TD + +I +H G S + G ++ +G +P + + + +H G+ ++Y
Sbjct: 43 TDNASAAIDVHIGSQSNPRELLGLAHFCEHLLFMGTKKYPDENEYRKYLESHNGISNAYT 102
Query: 31 ASNHFNF 11
ASN+ N+
Sbjct: 103 ASNNTNY 109
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/47 (25%), Positives = 19/47 (40%)
Frame = -2
Query: 485 PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSF 345
P +G++LR+ P+ P P + HP+P P F
Sbjct: 801 PSTGSQLRNVVPVSIVTSGGRPALPDEMASPSSSIGHPLPSPPPADF 847
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 434 PSSDPRTPPSASGSPCGQHHPVPDP 360
P+S P P S+SG+P PVP P
Sbjct: 1046 PTSTPPVPKSSSGAPSAP-PPVPAP 1069
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 437 PPSSDPRTPPSASGSPCGQHHPVPDPRY 354
PP + P PP P Q P P P Y
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGY 32
>SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 348
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 251 PYLFQCDPSGAYFAWKATAMG---KNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFE 421
P++ QCD + W T MG N N T Y + D+A TA+ + F+
Sbjct: 227 PFITQCDTATGDNYWAGTYMGDFVSNITNVLTNSTGHYCTTQQEDNASLTAL--TRASFD 284
Query: 422 GQMTADNIEV 451
G + + + +
Sbjct: 285 GLVNINRVVI 294
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 3.8
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -2
Query: 500 SREPVPVSGTRLRHK-YPLR---YYPPSSDPRTPPSASGSPCGQHHPVPDPRYT-SFPGT 336
S++P+P RL K P R PPSS P PP+ + PV + ++ SFP
Sbjct: 46 SKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQ----REASPVKNIEHSESFPSV 101
Query: 335 F 333
F
Sbjct: 102 F 102
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 25.8 bits (54), Expect = 3.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -3
Query: 373 QFQILGIPLFQERFPVVKVFPHRSRL 296
+F + IP ++ FPV K+ PH++ +
Sbjct: 238 RFTVFLIPTVRQIFPVSKLLPHKNAI 263
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 5.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 413 PPSASGSPCGQHHPVPDP 360
PP+ + +P +HHP P P
Sbjct: 731 PPTPAPTPAVKHHPPPPP 748
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 25.4 bits (53), Expect = 5.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -3
Query: 508 IVLHVSRFQSPEPACVTNT----HFDIIRRHLTLEPLLQRQDRRVDSIIQFQIL 359
I H+S+ S V+N F ++ LEPL +QD+R+ + F +L
Sbjct: 37 ITSHISKSSSQSHPDVSNAVLDETFSFMQEAKDLEPLTPKQDKRLRWKLYFTVL 90
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 460 TNTHFDIIRRHLTLEPLLQRQDRRVDS 380
+ ++FDI ++ L ++QRQ R +D+
Sbjct: 37 SESYFDITKKLHALSTVVQRQQREIDN 63
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 342 RNVFPLLKFFPIAVAFQAKYAPDGSH 265
RNV P+LK I Q Y PD H
Sbjct: 546 RNVPPILKRSSIGTPSQQAYFPDAPH 571
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,372,636
Number of Sequences: 5004
Number of extensions: 51725
Number of successful extensions: 204
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 206265012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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