Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J20
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 238 2e-63
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 105 2e-23
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 104 3e-23
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 83 9e-17
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 80 8e-16
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 31 0.37
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 31 0.37
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 2.0
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 2.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 3.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 3.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 3.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 3.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 4.5
U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell m... 28 4.5
U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell m... 28 4.5
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 28 4.5
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 4.5
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 4.5
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 4.5
AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance prot... 28 4.5
Z68336-6|CAE17801.1| 204|Caenorhabditis elegans Hypothetical pr... 27 6.0
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 6.0
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 6.0
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 27 7.9
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 27 7.9
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 27 7.9
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 238 bits (582), Expect = 2e-63
Identities = 109/171 (63%), Positives = 135/171 (78%), Gaps = 2/171 (1%)
Frame = +2
Query: 5 EDKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEY 184
+ KVE I+ HIG VYSGMGPD+R+LV +ARK+A +Y +MY E +PT QLV +A VMQEY
Sbjct: 58 QPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEY 117
Query: 185 TQSGGVRPFGVSLLICGWEND--RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT 358
TQSGGVRPFG SLLI GW+ + RP LFQCDPSGAYFAWKATA+GKN N KTFLEKR++
Sbjct: 118 TQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFS 177
Query: 359 EDLELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRRLEPAHVKDYL 511
E LELDD +HTA+LTL+E F+ M +N+EV +C+++GF RL V D+L
Sbjct: 178 EALELDDGIHTALLTLRESFDVGMNENNVEVAVCNSTGFHRLTKQQVHDHL 228
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 105 bits (252), Expect = 2e-23
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYT 187
+KV ++ +I +G+ D +L+ R A Y Y E +P QLVQ + Q YT
Sbjct: 63 EKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYT 122
Query: 188 QSGGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 364
Q GG RPFGVSLL GW+ Y L+Q DPSG Y WKAT +G N T L++ Y +
Sbjct: 123 QIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEY-KS 181
Query: 365 LELDDAVHTAILTLKEGFEGQMTADNIEVGI 457
L++A AI L + + ++ ++ +E+ +
Sbjct: 182 PNLEEAKQLAIKVLWKTLDVKLASEKVEMAV 212
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 104 bits (250), Expect = 3e-23
Identities = 51/150 (34%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +2
Query: 11 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 190
K+ MI H+ + ++G+ D R+LV +AR Q Y L +P+ A + + +A Q +TQ
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 191 SGGVRPFGVSLLICGWEND-RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 367
S G RPFG+S+LI G+++D P LF+ +PSGAY+ + A A G+ + +LE++Y+E+
Sbjct: 122 SPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEEN 181
Query: 368 ELDDAVHTAILTLKEGFEGQMTADNIEVGI 457
+D+A ++ + NIE+ +
Sbjct: 182 TVDEATTLKLVVKSLAQVVPPGSQNIEIAV 211
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 83.4 bits (197), Expect = 9e-17
Identities = 43/152 (28%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEY- 184
+K+ + HIG+ ++G+ D R LV +A+ AQ ++ Y+ I + Q VA + ++
Sbjct: 65 EKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFG 124
Query: 185 ---TQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRY 355
++ RPFGV++L G + + LF DPSG + KA ++G + + L+++Y
Sbjct: 125 DDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQY 184
Query: 356 TEDLELDDAVHTAILTLKEGFEGQMTADNIEV 451
+ L + + + A+ LK+ E ++ + N+EV
Sbjct: 185 HDALTIKEGLKMALAILKQVMEEKLNSANVEV 216
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 80.2 bits (189), Expect = 8e-16
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Frame = +2
Query: 2 HEDKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQE 181
H+ KV I H G+ +G+ D R+L + + Y + +P +L + + +Q
Sbjct: 59 HQKKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQA 118
Query: 182 YTQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT- 358
TQ G RPFGV +LI G++ D ++ Q DPS + T++G + +T+LE+
Sbjct: 119 NTQYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDN 178
Query: 359 -EDLELDDAVHTAILTLKEGF--EGQMTADNIEVGICDA-SGFRRLEPAHVKDYL 511
E + + A+L L++ E + A N +GI S F LE A V +L
Sbjct: 179 FEKSTPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQVAVHL 233
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 64.5 bits (150), Expect = 4e-11
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Frame = +2
Query: 14 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 193
V I+ +G GM PD + + +A+ A + +P L +++A + Q YTQ+
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQN 128
Query: 194 GGVRPFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 370
+R G +LL +++++ P +++ DP+G Y K ++G +FLEK+ + E
Sbjct: 129 AEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSE 188
Query: 371 L--DDAVHTAILTLKEGFEGQMTADNIEVGIC--DASGFRRLEPAHVKDYL 511
L +A+ AI L+ + + ++EV + D S F +L V+ +L
Sbjct: 189 LTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHL 239
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 58.8 bits (136), Expect = 2e-09
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +2
Query: 23 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGV 202
+ ++G+ +G PD L A A ++ Y EP+P + VA + +T G
Sbjct: 70 VNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTL-GIS 128
Query: 203 RPFGVSLLICGWENDRP-YLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDD 379
RPFG W LF +PSG + +KA A+GK+ K +EK E+L+++
Sbjct: 129 RPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQ 188
Query: 380 AVHTA 394
V A
Sbjct: 189 LVKEA 193
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +2
Query: 212 GVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHT 391
G LLI G + P+L+ C +G A+ TA G T LE+ + D+ D+A
Sbjct: 141 GAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKL 200
Query: 392 AILTLKEGFEGQMTADN 442
L+ G G + N
Sbjct: 201 VQRALEAGMHGDNASGN 217
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 437 PPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPGTF 333
P P TP S P HHP+ P Y PG+F
Sbjct: 1218 PTMPPPHTPSPFSAGPMS-HHPMGPPAYPGTPGSF 1251
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 437 PPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPGTF 333
P P TP S P HHP+ P Y PG+F
Sbjct: 1218 PTMPPPHTPSPFSAGPMS-HHPMGPPAYPGTPGSF 1251
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 437 PPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPGTF 333
P P TP S P HHP+ P Y PG+F
Sbjct: 1218 PTMPPPHTPSPFSAGPMS-HHPMGPPAYPGTPGSF 1251
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 461 HKYPLRYYPPSSDPRTPPSASGSPCGQHHP 372
+++P + +PP PP++ P GQHHP
Sbjct: 57 YEHPAQQHPPQHHS-VPPNSFAPPPGQHHP 85
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -2
Query: 506 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCG-QHHPVPDPRYTSF 345
+PS P P + P PP P+ PP P G Q HP P P Y +
Sbjct: 688 TPSDTPAPSTSV----PPPTSVQPPQ--PQQPPQGPPGPPGPQQHPGPYPGYPGY 736
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 512 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTS 348
R P R P P++ + + P PPS +PR PP SP P P PR S
Sbjct: 153 RSPPPRRP-PMTPPSPQRRPPRT--PPSPEPRNPPRTPPSPI----PPPPPRLNS 200
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 491 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 357
P P R+ P R PP P TPPS P + P P+PR
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP-PRTPPSPEPR 181
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 248 DRSPNRRSVTKRRKDGRLLIEYILA*RSPLAGPTALWVSA 129
+R+P +RS + RR + I YI R+P G A VS+
Sbjct: 454 ERAPKKRSTSSRRNQEPITITYIGRPRTPSEGDVASTVSS 493
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 437 PPSSDPRTPPSASGSPCGQHHPVPDPRYTS 348
PP +P TP S SP Q P P Y S
Sbjct: 340 PPVREPETPDSGYPSPAPQEPAHPSPSYPS 369
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -2
Query: 506 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQH-HPVPDPRYTSFP 342
SP P P SG + P PS P PP SG P H HP PR T P
Sbjct: 59 SPPPAPRP-SGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLP 113
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 CMTVATRWTNCAVGIGSWYIR*YCWAIFLACVT-SRR*SGPMPEYTIPIWPVIISTLSSC 1
C V++R NC + + ++ C A + A V+ ++ GP P YT P P + +C
Sbjct: 943 CQGVSSRSVNCGITV-CYFPDDSCCAGYSATVSGTQHICGPQPNYTTPYAPYDPTCTDNC 1001
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 437 PPSSDPRTPPSASGSPCGQHHPVP 366
PP P PP S SPC + P P
Sbjct: 71 PPMCPPPPPPMPSYSPCQSYAPAP 94
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 446 RYYPPSSDPRTPPSASGSP--CGQHHPVPDPRYTSFP 342
R PP+ P PP GSP G P P P S P
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 446 RYYPPSSDPRTPPSASGSP--CGQHHPVPDPRYTSFP 342
R PP+ P PP GSP G P P P S P
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 446 RYYPPSSDPRTPPSASGSP--CGQHHPVPDPRYTSFP 342
R PP+ P PP GSP G P P P S P
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 443 YYPPSSDPRTPPSASGSPCGQHHPVPDP 360
Y PP+ P PP AS PC PVP P
Sbjct: 83 YVPPAPLPPPPPPAS--PCCGPSPVPAP 108
>U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell
migration protein13, isoform b protein.
Length = 356
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASGSPCGQ-HHPVPDPRYTSFPGTF 333
P ++YPPS PPSA+ S + HH P S F
Sbjct: 284 PPQFYPPSPPKMPPPSAASSYTPRLHHHFEGPLVPSETSAF 324
>U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell
migration protein13, isoform a protein.
Length = 362
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASGSPCGQ-HHPVPDPRYTSFPGTF 333
P ++YPPS PPSA+ S + HH P S F
Sbjct: 290 PPQFYPPSPPKMPPPSAASSYTPRLHHHFEGPLVPSETSAF 330
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 50 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 148
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 50 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 148
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 50 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 148
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 50 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 148
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance protein
MIG-13 protein.
Length = 362
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASGSPCGQ-HHPVPDPRYTSFPGTF 333
P ++YPPS PPSA+ S + HH P S F
Sbjct: 290 PPQFYPPSPPKMPPPSAASSYTPRLHHHFEGPLVPSETSAF 330
>Z68336-6|CAE17801.1| 204|Caenorhabditis elegans Hypothetical
protein F22B3.9 protein.
Length = 204
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 431 SSDPRTPPSASGSPCGQHHPVPDPR--YTSFPG 339
S DP +PP S SP G + +PR Y PG
Sbjct: 32 SLDPPSPPFLSPSPLGDYRVNDEPRMHYLQVPG 64
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
glp-1 protein.
Length = 1492
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 360
P RY PS+ P PP GS +H P P
Sbjct: 900 PSRYQDPSTYPAPPPILPGSAAYEHAIRPYP 930
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 360
P RY PS+ P PP GS +H P P
Sbjct: 920 PSRYQDPSTYPAPPPILPGSAAYEHAIRPYP 950
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 191 SGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 370
S G + + + LL+ E ++ +CD Y W A + + GK+ + Y +++E
Sbjct: 464 SVGQQKYHIKLLLPTAEGMIDFILKCDSEHQYARWMAAC--RLASRGKSMADSSYQQEVE 521
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 80 RADDNQGPCRSTPFLYGQ*SFQLCP 6
+ D++ G C TP YG ++CP
Sbjct: 867 KCDESDGSCHCTPGFYGATCSEVCP 891
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 80 RADDNQGPCRSTPFLYGQ*SFQLCP 6
+ D++ G C TP YG ++CP
Sbjct: 867 KCDESDGSCHCTPGFYGATCSEVCP 891
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 191 SGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 370
S G + + + LL+ E ++ +CD Y W A + + GK+ + Y +++E
Sbjct: 464 SVGQQKYHIKLLLPTAEGMIDFILKCDSEHQYARWMAAC--RLASRGKSMADSSYQQEVE 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,364,246
Number of Sequences: 27780
Number of extensions: 309269
Number of successful extensions: 1289
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -