Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J20
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.35 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   0.80 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 15/65 (23%), Positives = 17/65 (26%)
 Frame = -2

Query: 446 RYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPGTFXXXXXXXXXXXXXXXXXXPTDR 267
           R YP  S    P   +    G     P    TS P T                    T  
Sbjct: 70  RLYPAFSSSCDPVPGNLEQIGSRPLHPPASSTSLPATITTTTTTTTTTTATAAATATTTA 129

Query: 266 TGISK 252
           TG+ K
Sbjct: 130 TGLIK 134


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.2 bits (50), Expect = 0.80
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 440 YPPSSDPRTPPSASG 396
           YPP SDP  P   SG
Sbjct: 659 YPPDSDPPPPDDISG 673


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 293 WKATAMGKNFNNGKTFLEKRYT 358
           W A    +NF + K +L +R+T
Sbjct: 424 WIAGLNEENFKDAKKYLPERWT 445


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -2

Query: 503 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS 393
           PS    P +  R     P +  PP   P  PPS + S
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPS 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,879
Number of Sequences: 438
Number of extensions: 3979
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)