Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J20
(513 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 240 3e-64
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 239 1e-63
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 116 7e-27
At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 115 2e-26
At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 109 1e-24
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 99 9e-22
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 100 1e-21
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 92 2e-19
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 91 4e-19
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 91 5e-19
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 89 1e-18
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 79 1e-15
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 48 4e-06
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 37 0.009
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 34 0.065
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 33 0.11
At1g27880.1 68414.m03416 ATP-dependent DNA helicase, putative si... 31 0.46
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 31 0.60
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 31 0.60
At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transfera... 30 0.80
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 1.4
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 29 1.4
At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.4
At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger) fa... 29 1.8
At3g10720.2 68416.m01291 pectinesterase, putative contains simil... 29 1.8
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 29 2.4
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 29 2.4
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 29 2.4
At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17 si... 28 3.2
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 28 3.2
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 28 3.2
At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing ... 28 4.2
At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transfera... 28 4.2
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 28 4.2
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 27 5.6
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 27 5.6
At4g24020.1 68417.m03452 RWP-RK domain-containing protein simila... 27 5.6
At4g23882.1 68417.m03434 heavy-metal-associated domain-containin... 27 5.6
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 5.6
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 27 5.6
At3g04820.1 68416.m00522 expressed protein contains PFam profile... 27 5.6
At3g04370.1 68416.m00462 hypothetical protein contains Pfam prof... 27 5.6
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 27 5.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 5.6
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 27 5.6
At1g10620.1 68414.m01204 protein kinase family protein contains ... 27 5.6
At5g56850.2 68418.m07093 expressed protein 27 7.4
At5g56850.1 68418.m07094 expressed protein 27 7.4
At5g28490.1 68418.m03466 expressed protein contains Pfam profile... 27 7.4
At4g33660.1 68417.m04781 expressed protein 27 7.4
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 27 7.4
At1g27620.1 68414.m03373 transferase family protein similar to h... 27 7.4
At5g47580.1 68418.m05873 expressed protein strong similarity to ... 27 9.8
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 27 9.8
At4g17620.1 68417.m02636 glycine-rich protein 27 9.8
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 27 9.8
At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing ... 27 9.8
At2g38360.1 68415.m04712 prenylated rab acceptor (PRA1) family p... 27 9.8
At2g31150.1 68415.m03803 expressed protein 27 9.8
At1g78700.1 68414.m09173 brassinosteroid signalling positive reg... 27 9.8
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 27 9.8
At1g12810.1 68414.m01488 proline-rich family protein contains pr... 27 9.8
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 240 bits (588), Expect = 3e-64
Identities = 109/168 (64%), Positives = 139/168 (82%), Gaps = 1/168 (0%)
Frame = +2
Query: 11 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 190
K++ +T +IG+VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQ
Sbjct: 64 KIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQ 123
Query: 191 SGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 370
SGGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+E
Sbjct: 124 SGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME 183
Query: 371 LDDAVHTAILTLKEGFEGQMTADNIEVGICDASG-FRRLEPAHVKDYL 511
LDDA+HTAILTLKEGFEG++++ NIE+G A FR L PA + DYL
Sbjct: 184 LDDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEIDDYL 231
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 239 bits (584), Expect = 1e-63
Identities = 109/168 (64%), Positives = 138/168 (82%), Gaps = 1/168 (0%)
Frame = +2
Query: 11 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 190
K++ +T +IG VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQ
Sbjct: 64 KIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQ 123
Query: 191 SGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 370
SGGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+E
Sbjct: 124 SGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME 183
Query: 371 LDDAVHTAILTLKEGFEGQMTADNIEVG-ICDASGFRRLEPAHVKDYL 511
LDDA+HTAILTLKEGFEG++++ NIE+G I FR L PA + DYL
Sbjct: 184 LDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEIDDYL 231
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 116 bits (280), Expect = 7e-27
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYT 187
+K+ I H+ +G+ D +L+ AR AQ+Y MY EP+P QLVQ + Q YT
Sbjct: 63 EKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYT 122
Query: 188 QSGGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 364
Q GG+RPFGVS L GW+ + L+ DPSG Y WKA A+G N ++ L++ Y +D
Sbjct: 123 QFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDD 182
Query: 365 LELDDAVHTAILTLKEGFEG-QMTADNIEV 451
++AV A+ L + + +T++ +E+
Sbjct: 183 ATREEAVELALKVLTKTMDSTSLTSEKLEL 212
>At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2)
(PRS1) (PRC6) identical to SP|O24616 Proteasome subunit
alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha
subunit D2) {Arabidopsis thaliana}
Length = 250
Score = 115 bits (277), Expect = 2e-26
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
Frame = +2
Query: 11 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 190
K+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQ
Sbjct: 62 KIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQ 121
Query: 191 SGGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 364
SGGVRPFG+S LI G++ + P L+Q DPSG + AWKA A G+N N+ + FLEK Y E
Sbjct: 122 SGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES 181
Query: 365 LELDDAVHTAILTLKEGFEGQMTADNIEVGIC--DASGFRRLEPAHV 499
+ + AI L E E NIEV + + +G R+LE A +
Sbjct: 182 -SGQETIKLAIRALLEVVES--GGKNIEVAVMTREETGLRQLEEAEI 225
>At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1)
Length = 250
Score = 109 bits (262), Expect = 1e-24
Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Frame = +2
Query: 11 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 190
K+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQ
Sbjct: 62 KIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQ 121
Query: 191 SGGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 364
SGGVRPFG+S LI G++ P L+Q DPSG + AWKA A G+N N+ + FLEK Y E
Sbjct: 122 SGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES 181
Query: 365 LELDDAVHTAILTLKEGFEGQMTADNIEVGI 457
+ V AI L E E NIEV +
Sbjct: 182 AG-QETVKLAIRALLEVVES--GGKNIEVAV 209
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 99 bits (238), Expect = 9e-22
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Frame = +2
Query: 23 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGV 202
IT +IG+V +G+ D R LV QAR A ++ Y +P L + +A Q YTQ +
Sbjct: 72 ITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYM 131
Query: 203 RPFGVSLLICGW-ENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED--LEL 373
RP GV ++ G E + P L++CDP+G ++ KAT+ G FLEK+ E+
Sbjct: 132 RPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTF 191
Query: 374 DDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRRLEPAHVKDYL 511
D+ V TAI L+ + A IEVG+ A FR L ++++L
Sbjct: 192 DETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHL 239
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 99.5 bits (237), Expect = 1e-21
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Frame = +2
Query: 23 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGV 202
+T ++G++ +GM D R LV QAR A ++ Y +P L + +A Q YTQ +
Sbjct: 72 VTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYM 131
Query: 203 RPFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED--LEL 373
RP GV ++ G + +R P L++CDP+G ++ KAT+ G FLEK+ E+
Sbjct: 132 RPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTY 191
Query: 374 DDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRRLEPAHVKDYL 511
D+ V TAI L+ + A IEVG+ A FR L + ++L
Sbjct: 192 DETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHL 239
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 91.9 bits (218), Expect = 2e-19
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Frame = +2
Query: 2 HEDKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQE 181
H+ K+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q
Sbjct: 59 HQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQV 118
Query: 182 YTQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE 361
TQ RP+GV LL+ G + +L+ PSG YF ++A A+G KT+LE+R+
Sbjct: 119 CTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFES 178
Query: 362 --DLELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRRLEPAHVKD 505
D +D + AIL ++E +G + ++ +C + EP H D
Sbjct: 179 FGDSSREDLIKDAILAVRETLQG----ETLKSSLCTVAILGVDEPFHFLD 224
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 91.1 bits (216), Expect = 4e-19
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Frame = +2
Query: 2 HEDKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQE 181
H+ K+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q
Sbjct: 59 HQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQV 118
Query: 182 YTQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT- 358
TQ RP+GV LL+ G + +L+ PSG YF ++A A+G KT+LE+++
Sbjct: 119 CTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFES 178
Query: 359 -EDLELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRRLEPAHVKD 505
++ +D + AI+ ++E +G + ++ +C S EP H D
Sbjct: 179 FQESSKEDLIKDAIMAIRETLQG----ETLKSSLCTVSVLGVDEPFHFLD 224
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 90.6 bits (215), Expect = 5e-19
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIP---TAQLVQRVATVMQ 178
+K+ I HIG SG+ D R LV AR Q + Y EP+ T Q + +A
Sbjct: 65 EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124
Query: 179 EYTQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT 358
E + RPFGVSLLI G + + P L+ DPSG ++ A A+G + L++++
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 359 EDLELDDAVHTAILTLKEGFEGQMTADNIEV 451
+DL L +A A+ LK+ E ++T +N+++
Sbjct: 185 KDLSLQEAETIAVSILKQVMEEKVTPNNVDI 215
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 89.4 bits (212), Expect = 1e-18
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Frame = +2
Query: 8 DKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIP---TAQLVQRVATVMQ 178
+K+ I HIG SG+ D R LV AR Q + Y EP+ T Q + +A
Sbjct: 65 EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124
Query: 179 EYTQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT 358
E + RPFGVSLLI G + + P L+ DPSG ++ A A+G + L++++
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184
Query: 359 EDLELDDAVHTAILTLKEGFEGQMTADNIEV 451
+D+ L +A A+ LK+ E ++T +N+++
Sbjct: 185 KDITLQEAETIAVSILKQVMEEKVTPNNVDI 215
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 79.4 bits (187), Expect = 1e-15
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Frame = +2
Query: 11 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 190
++ + H GM +G+ D R +V +A+ A+ Y +Y + +P +L +RVA+ + T
Sbjct: 66 RIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTL 125
Query: 191 SGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 370
+RPFG +++ G++ D P L+ +PSG + + A+GK KT +EK ++
Sbjct: 126 YWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMT 185
Query: 371 LDDAV-HTAILTLKEGFEGQMTADNIEVG-ICDAS 469
+ V A + K E + A +E+ IC+ S
Sbjct: 186 CKEGVIEVAKIIYKLHDEAKDKAFELEMSWICEES 220
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 74 LLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWENDRP 253
+LV +A+ ++ E T++L+Q +++ + Y V + + GW+ +
Sbjct: 312 MLVLPLEFLAKDGVVLVGEKKVTSKLLQTSSSMEKMYKIDDHV-----ACAVAGWDRNHG 366
Query: 254 Y-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKE 412
+ L+ DPSG Y W+A A+G N ++ L++ Y +D ++ V AI L +
Sbjct: 367 FQLYMSDPSGNYGGWQAAAVGANNQAAQSILKQDYKDDATREEVVQLAIKVLSK 420
Score = 27.1 bits (57), Expect = 7.4
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = -2
Query: 509 DSPSREPVPVSGTRLRHKYPLRYYPPSSDP--RTPPSASGSPCGQHHPVPDPRYTSFPGT 336
D P P PV + K P PP+ P TP + P + P P P YT P T
Sbjct: 30 DPPKPSPHPVKPPKHPAKPPK---PPTVKPPTHTPKPPTVKPPPPYIPCPPPPYTPKPPT 86
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 497 REPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
R P P + YP Y PPSS+P PP + ++P P P Y + P
Sbjct: 7 RYPYPYGQYPYPYPYPAPYRPPSSEP-YPPPPTNQYSAPYYPYPPPPYATPP 57
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -2
Query: 503 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQH 378
PS EP P T ++ P YPP PP AS P QH
Sbjct: 28 PSSEPYPPPPTN-QYSAPYYPYPPPPYATPPPYASPPPPHQH 68
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 33.9 bits (74), Expect = 0.065
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -2
Query: 503 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 357
PS +PV G P PP P+ PP+ S SPC P P P+
Sbjct: 18 PSSKPVAPPGPS-----PCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPK 61
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/56 (39%), Positives = 24/56 (42%)
Frame = -2
Query: 509 DSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
DSP R P PV+ RLR R PS + R P P Q P P PR P
Sbjct: 422 DSPGRSPSPVA--RLRDPTGARLPSPSIEQRLP----SPPVAQRLPSPPPRRAGLP 471
>At1g27880.1 68414.m03416 ATP-dependent DNA helicase, putative
similar to SP|O94761 ATP-dependent DNA helicase Q4
(RecQ4) {Homo sapiens}; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 911
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 506 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 360
+P R+ P S +L+ P ++ PP S T S+ P HP P+P
Sbjct: 15 TPPRDSFPSSPPQLQS--PAKHVPPVSRKMTSSSSRSKPKAPTHPPPNP 61
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 30.7 bits (66), Expect = 0.60
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 497 REPVPVSGTRLRHK--YPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPG 339
++P P SG + Y ++ YPP+ + PP+ S +P Q + P P+ + + G
Sbjct: 327 QQPPPSSGYNPEEQPPYQMQSYPPNPPRQQPPAGS-TPSQQFYNPPQPQPSMYDG 380
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 30.7 bits (66), Expect = 0.60
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 512 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
+ S +P+PVS + L++ P PSS+ + P + P PV PR S P
Sbjct: 433 QSSQRSKPLPVSQS-LQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQP 488
>At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 30.3 bits (65), Expect = 0.80
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 407 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 508
K+ F+G + A+ G+ + F+ LEPA+ KDY
Sbjct: 207 KDIFDGMVEANETSYGVI-VNSFQELEPAYAKDY 239
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 437 PPSSDPR--TPPSASGSPCGQHHPVPDPRYTSFP 342
PP DP+ TPP+ +P P P P+ TS P
Sbjct: 46 PPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPP 79
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 434 PSSDPRTPPSASGSPCGQHHPVPDPRYTSF 345
PSS P PP A +P P PR+ S+
Sbjct: 449 PSSQPSPPPPAGSDQNTHIYPQPQPRFDSY 478
>At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 491
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 407 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 508
K+ +G DN G+ + F LEPA+V+DY
Sbjct: 203 KDFLDGMTEGDNTSYGVI-VNTFEELEPAYVRDY 235
>At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -2
Query: 509 DSPSREPVPVSGTRLRHKYPLRYYPPS--SDPRTPPSASGSPCGQ 381
D P ++P P +G H YP+ S P PPS+S P Q
Sbjct: 29 DPPPQQPPPQNGYSYSHNYPVSTPQLSLPPPPAQPPSSSQPPPSQ 73
>At3g10720.2 68416.m01291 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 619
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -2
Query: 509 DSPSREPV--PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 357
+ PS+ P PV P + PPS P PPS S SP P P+
Sbjct: 38 EPPSQLPFEPPVESPFFPPSQPPIFVPPSQPPSLPPSQSQSPSLACKSTPYPK 90
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 503 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS--PCGQHHPVP 366
P ++ P SG ++P + YPPS P+ PP ++ S P G + P P
Sbjct: 151 PPQQGYPPSGYP---QHPPQGYPPSGYPQNPPPSAYSQYPPGAYPPPP 195
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
P + YPPS P+ PP P G P Y+ +P
Sbjct: 152 PQQGYPPSGYPQHPPQGY-PPSGYPQNPPPSAYSQYP 187
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 503 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS--PCGQHHPVP 366
P ++ P SG ++P + YPPS P+ PP ++ S P G + P P
Sbjct: 207 PPQQGYPPSGYP---QHPPQGYPPSGYPQNPPPSAYSQYPPGAYPPPP 251
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
P + YPPS P+ PP P G P Y+ +P
Sbjct: 208 PQQGYPPSGYPQHPPQGY-PPSGYPQNPPPSAYSQYP 243
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Frame = -2
Query: 485 PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPC-----GQHH--PVPDPRYTSFPGT 336
PV+ T H + R PP P PP P G HH P P P T+ P T
Sbjct: 136 PVTTTTAGHHHHRRSPPPPPPPPPPPPTITPPVTTTTTGHHHHRPPPPPPATTTPIT 192
>At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17
similar to beta-1,3-glucanase GI:6714534 from [Salix
gilgiana]
Length = 380
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 506 SPSREPVPVSGTRLRHKYP-LRYYP-PSSDP-RTPPSASGSPCGQHHPVPDPR 357
SPS E P+ + P + Y+P PS P + S PC +HP P P+
Sbjct: 230 SPSPETSPIHSSIGSPSPPTIPYFPEPSQSPMESNQGISLPPCLPYHPAPSPQ 282
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -2
Query: 491 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
P+P++GT P YYP + PPS+S P ++P P P Y P
Sbjct: 36 PLPIAGTGSTQ--PAGYYPQPTGYYPPPSSSNVP---NYPSP-PYYGGNP 79
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 67 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 246
LS+ + ++E P VL V RA+ A S D+ + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-NDLSRDKE--YLPLNGLPEFNKLSTKLILGDD 90
Query: 247 SPLL 258
SP L
Sbjct: 91 SPAL 94
>At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing
protein identical to H-protein promoter binding
factor-2a GI:3386546 from [Arabidopsis thaliana]
Length = 448
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 455 YPLRYYPPSSDPRTPPSASGSPCGQ 381
YP+ +YP + P PP S SP Q
Sbjct: 314 YPMPFYPYWTIPMLPPHQSSSPISQ 338
>At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 407 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 508
KE E + AD G+ + F+ LEPA+ KD+
Sbjct: 207 KEILEDMVEADKTSYGVI-VNSFQELEPAYAKDF 239
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 67 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 246
LS+ + ++E P VL V RA+ A D + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-----NDLDKEYLPLNGLPEFNKLSTKLILGDD 88
Query: 247 SPLL 258
SP L
Sbjct: 89 SPAL 92
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.5 bits (58), Expect = 5.6
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 19 NDYWPYRNGVLRHGP*LSSARHTSQENGPTVLPDVPRADTH-SAVGPASGDRHARI-YSI 192
+DY YRN GP A S E P L R D H PA+ +R A + + I
Sbjct: 698 DDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEI 757
Query: 193 RRR 201
++R
Sbjct: 758 QKR 760
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -2
Query: 485 PVSGTRLRHKYPLRYYPPS--SDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
PV+ R P+ PP S P PP P H P P P Y+ P
Sbjct: 511 PVTKRRSPPPAPVNSPPPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPP 560
>At4g24020.1 68417.m03452 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 959
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 338 FLEKRYTEDLELDDAVHTAILTLKEGFEGQMTADNIEVG 454
FL T+D E D + + ++T+KE F+ A ++ G
Sbjct: 470 FLPSSITDDQEQDLLLGSILVTMKEHFQSLRVASGVDFG 508
>At4g23882.1 68417.m03434 heavy-metal-associated domain-containing
protein
Length = 284
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -2
Query: 452 PLRYYPPSSDP-RTPPSASGSPCGQHHPVPDPRYTSFP 342
P+ Y PPS P R PP +G+ Q P P Y P
Sbjct: 238 PIPYPPPSFFPGRPPPPYTGAGMFQSAPPQSPPYFPVP 275
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -2
Query: 500 SREPVPVSGTRLRHKYPLRYY----PPSSDPRTPPSASGSPCGQHHPVPDP 360
S +P P L P +Y PP + +PP S PC ++ P P P
Sbjct: 712 SPQPPPPPHYSLPPPTPTYHYISPPPPPTPIHSPPPQSHPPCIEYSPPPPP 762
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 85 TSQENGP--TVLPDVPRADTHSAVGPASGDRHARIYSIRRRPS 207
TS+ N T P++ +DT SA GP + AR+ S+ PS
Sbjct: 473 TSEGNAAASTTEPELALSDTDSASGPTPCNHDARLSSVASVPS 515
>At3g04820.1 68416.m00522 expressed protein contains PFam profile
PF01142: Uncharacterized protein family UPF0024;
expression supported by MPSS
Length = 747
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 389 TAILTLKEGFEGQMTADNIEVGI-CDAS---GFRRLEPAHVKDYL 511
T I T+ FEG T D +VGI C S GFR + D++
Sbjct: 25 TKIATIATNFEGMKTVDEADVGISCFISQLPGFRGILKQRYADFI 69
>At3g04370.1 68416.m00462 hypothetical protein contains Pfam profile
PF01657: Domain of unknown function
Length = 332
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 263 QCDPSGAYFAWKATAMGKNFNNGKTFL 343
QCDP A KAT N++N FL
Sbjct: 38 QCDPLDANILQKATTKSPNYSNQNLFL 64
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 509 DSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASG 396
DS P P++ T + + P YYPP P PP SG
Sbjct: 786 DSSMPNP-PMNNTNPQMQQP--YYPPPMQPAPPPMNSG 820
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 461 HKYPLRYYPPSSDPRTPPSASGSPCGQHHPVP 366
H + + PP+S P T P +P H P P
Sbjct: 440 HHHVVHSPPPASSPPTSPPVHSTPSPVHKPQP 471
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 443 YYPPSSDPRTPPSASGSPCGQHHPVPDPRY 354
YYPP + PP P Q P P P Y
Sbjct: 696 YYPPVTQSPPPPPVYYLPVTQSPPPPSPVY 725
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -2
Query: 491 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYT 351
P P + + P PP + P +PP + P P P P+ T
Sbjct: 60 PPPATAAQPPPNQPPNTTPPPTPPSSPPPSITPPPSPPQPQPPPQST 106
>At5g56850.2 68418.m07093 expressed protein
Length = 413
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 272 DRTGISKGDRSPNRRSVTKRRKDGRL 195
+ TG+SK +R P R+S+ + D L
Sbjct: 139 EETGLSKPERKPKRKSMRRSMSDSNL 164
>At5g56850.1 68418.m07094 expressed protein
Length = 551
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 272 DRTGISKGDRSPNRRSVTKRRKDGRL 195
+ TG+SK +R P R+S+ + D L
Sbjct: 277 EETGLSKPERKPKRKSMRRSMSDSNL 302
>At5g28490.1 68418.m03466 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 190
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 81 SHKPGKWPNSTT*CT---TSRYPQRSWSSEWRPSCKNILN 191
SH+P K PNS+T T +SRY + +W C+ + N
Sbjct: 5 SHQPNKNPNSSTQLTPPSSSRYENQK-RRDWNTFCQYLRN 43
>At4g33660.1 68417.m04781 expressed protein
Length = 76
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 458 KYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 360
KY Y P + P+ PP G P Q++P P P
Sbjct: 5 KYAYPYPAPGNYPQGPPPPVGVP-PQYYPPPPP 36
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2
Query: 506 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 342
SP P ++ +K P Y SS P PP S SP ++ P P SFP
Sbjct: 158 SPPPPPYYSPSPKVDYKSPPPPYVYSSPP-PPPYYSPSPKVEYKSPPPPYVYSFP 211
>At1g27620.1 68414.m03373 transferase family protein similar to
hypersensitivity-related gene product HSR201 - Nicotiana
tabacum, EMBL:X95343; contains Pfam transferase family
domain PF00248
Length = 442
Score = 27.1 bits (57), Expect = 7.4
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = +1
Query: 91 QENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER-SPLLIPV 267
+EN PT++ + HS D H +SI+ F++ ++ L L + S +L+
Sbjct: 10 EENQPTLITPLSPTPNHSLYLSNLDDHHFLRFSIKYLYLFQKSISPLTLKDSLSRVLVDY 69
Query: 268 RS-VGRV------LRLEGDCDGE 315
GR+ +LE DC+GE
Sbjct: 70 YPFAGRIRVSDEGSKLEVDCNGE 92
>At5g47580.1 68418.m05873 expressed protein strong similarity to
unknown protein (pir||E71441)
Length = 748
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 54 AWAL-IIVCSSHKPGKWPNST 113
+W + ++VC HKP WP T
Sbjct: 595 SWQMNLMVCMKHKPSHWPIKT 615
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -2
Query: 452 PLRYYPPSSDPRTPPSASG-SPCGQHHPVPDP 360
P YPP PPS SG P +P P P
Sbjct: 186 PASGYPPQPSAYPPPSTSGYPPIPSAYPPPPP 217
>At4g17620.1 68417.m02636 glycine-rich protein
Length = 544
Score = 26.6 bits (56), Expect = 9.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 176 QEYTQSGGVRPFGVSLLICGWEND 247
+EYT++ + + + +L GW ND
Sbjct: 122 EEYTKTPAISTYSIPVLPAGWSND 145
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -2
Query: 452 PLRYYPPSSDP---RTPPSASGSPCGQHHPVP 366
P YYPP+S R PPS+S G ++P P
Sbjct: 77 PYYYYPPASQSGSYRPPPSSSSG--GYYYPPP 106
>At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing
protein low similarity to nucleolar phosphoprotein
(Nopp52), Tetrahymena thermophila, EMBL:TT51555;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 597
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 85 TSQENGPTVLPDVPRADTHSAVGPASGDRHARIY 186
T Q+ T P +PR T S P D + R+Y
Sbjct: 232 TIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVY 265
>At2g38360.1 68415.m04712 prenylated rab acceptor (PRA1) family
protein weak similarity to prenylated Rab acceptor 1
(PRA1) [Homo sapiens] GI:4877285; contains Pfam profile
PF03208: Prenylated rab acceptor (PRA1)
Length = 220
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 434 PSSDPRTPPSASGSPCGQHHPVPDPRYTSF 345
P S+P+T PSA+ S P+ P + +F
Sbjct: 10 PISNPQTVPSAAPSSVESQPPIATPAFRNF 39
>At2g31150.1 68415.m03803 expressed protein
Length = 309
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 512 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDP 420
RD P EP P S P Y P S+P
Sbjct: 216 RDEPEYEPEPESAAEYDEPEPEAEYEPESEP 246
>At1g78700.1 68414.m09173 brassinosteroid signalling positive
regulator-related contains similarity to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 325
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 407 SASGSPCGQHHPVPDPRYTSFPGT 336
SA+ SPC + P P Y PG+
Sbjct: 87 SATASPCSSYQPSPCASYNPSPGS 110
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 26.6 bits (56), Expect = 9.8
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = -2
Query: 506 SPSREPVPVSGTR--LRHKYPLRYYPPSSDP--RTPPSA---SGSPCGQHHPVPDPRYTS 348
SPS +PV S + + P YY PS P ++PP S P + P P P Y S
Sbjct: 322 SPSPKPVYKSPPPPYVYNSPPPPYYSPSPKPAYKSPPPPYVYSSPPPPYYSPSPKPTYKS 381
Query: 347 FP 342
P
Sbjct: 382 PP 383
>At1g12810.1 68414.m01488 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 129
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -2
Query: 455 YPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR-YTSFP 342
Y Y PP PP SP H P P+ Y +P
Sbjct: 16 YQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQPYGGYP 54
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,768,685
Number of Sequences: 28952
Number of extensions: 295261
Number of successful extensions: 1272
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -