Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J19
(403 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens ... 34 0.15
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 33 0.27
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 33 0.36
AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens ... 32 0.82
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 31 1.1
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 31 1.1
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 31 1.9
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 31 1.9
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 29 4.4
AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens ... 29 4.4
AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein. 29 4.4
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 29 4.4
M62424-1|AAA36743.1| 425|Homo sapiens thrombin receptor protein. 29 5.8
BT007279-1|AAP35943.1| 425|Homo sapiens coagulation factor II (... 29 7.7
BC051909-1|AAH51909.1| 425|Homo sapiens coagulation factor II (... 29 7.7
BC002464-1|AAH02464.1| 425|Homo sapiens coagulation factor II (... 29 7.7
AF391809-1|AAK69768.1| 425|Homo sapiens coagulation factor II (... 29 7.7
>AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ38312 fis, clone FCBBF3021506. ).
Length = 134
Score = 34.3 bits (75), Expect = 0.15
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +1
Query: 91 CACVCQDNTCTDGYYLAYVCVCVGVLCACIDTVPYLKNKFVYARAICEF-CFYYCPDVIV 267
C C+C+ C Y+CVCV V C C+ Y++ V +C F C + C V V
Sbjct: 7 CVCMCRWCLCV----CIYMCVCVPV-CMCVYVCVYVR-ICVICVCVCVFVCAHMCSCVFV 60
Query: 268 IF*HVRACPRLEIY*QVC-CSLRYSDIYV 351
+V C L + VC C Y ++V
Sbjct: 61 ---YVCICVCLYVCVFVCVCMYVYLCVFV 86
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 88 VCACVCQDNTCTDGYYLAY-VCVCVGV-LCACI 180
VCACVC C G +L VC+CVG LC C+
Sbjct: 112 VCACVC-GCLCVCGAHLCVCVCLCVGAHLCVCL 143
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.36
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 88 VCACVCQD-NTCTDGYYLAYVCVCVGVLCACI 180
VC C+C C Y Y+CVC+ V C C+
Sbjct: 157 VCVCLCVSVYVCVSSYLCVYLCVCMYV-CECV 187
Score = 29.5 bits (63), Expect = 4.4
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Frame = +1
Query: 85 SVCACVCQDNTCTDGYYLAYVCVCVGV-------LCACIDTVPYLKNKFVYARAICEFCF 243
SVC CV + Y YVC+CV V +CAC+ ++ + +C C
Sbjct: 104 SVCLCVYLHISV---YLCVYVCICVCVSVSLCVSVCACLSLCVCIRVSVCLSLRVC-VCV 159
Query: 244 YYCPDVIVI---F*HVRACPRLEIY*QVCCSLRYSD 342
C V V + V C + + VC S+ SD
Sbjct: 160 CLCVSVYVCVSSYLCVYLCVCMYVCECVCVSVSLSD 195
>AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ46204 fis, clone TESTI4009501. ).
Length = 225
Score = 31.9 bits (69), Expect = 0.82
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 290 HARTC*NITITSGQ**KQNSHIARA*TNLFFKYGTVS-MHAHNTPTHTHTYAK*YPSVHV 114
H RT ++ +G +H+ T + + T+S MH H TH HT+ + H
Sbjct: 77 HTRTHTHMHTHTGMHTLTGTHVHTPHTQMHTRILTLSHMHTH-AHTHAHTHGHTHTRAHS 135
Query: 113 LS*HTHAQTLY 81
HTHA + Y
Sbjct: 136 THAHTHAHSHY 146
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 31.5 bits (68), Expect = 1.1
Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 97 CVCQDNTCTDGYYLAYVCVCVGVLCACIDTVPYLKNKF-VYARAICEFCFYYCPDVIVIF 273
CVC CT Y +VCVCV T Y+ VY R C C I
Sbjct: 108 CVC---VCTHAYIHTHVCVCV-------HTHIYIHMYVCVYTRIYTYTCVCVCTHA-YIH 156
Query: 274 *HVRACPRLEIY*QVCCSLRYSDIY 348
HV C IY +C + Y+ IY
Sbjct: 157 THVYVCVHTHIYIHMCVCV-YTRIY 180
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 212 TNLFFKYGTVSMHAH-NTPTHTHTYAK*YPSVHVLS*HTHA 93
T+ Y +S++ H +T THTHT+A Y H HTHA
Sbjct: 62 THTLSLYWLISLYIHTHTHTHTHTHAVLYLPTHT---HTHA 99
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 85 SVCACVCQDNTCTDGYYLAYVCVCVGV-LCACI 180
SVC CVC + C +CVCV V LC C+
Sbjct: 57 SVCLCVCLVSVC----LCVCLCVCVSVCLCVCL 85
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +1
Query: 88 VCACVCQDNTCTDGYYLAYVCVCVGV---LCACIDTV 189
VC CVC C +CVCV V LC C+ +V
Sbjct: 12 VCVCVCVCVLCVSVCVCVCLCVCVCVCVCLCLCVLSV 48
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 179 MHAH-NTPTHTHTYAK*YPSVHVLS-*HTHAQT 87
MHAH +T THTHT+A +H + HTH T
Sbjct: 1 MHAHIHTCTHTHTHAHIRTCIHTCTDTHTHMHT 33
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 185 VSMHAHNTPTHTHTYAK*YPSVHVLS-*HTHAQT 87
+ MH H T THTHTY + +H+ + HT+ T
Sbjct: 297 IHMHMH-THTHTHTYTHAHAHIHINTYMHTYTYT 329
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 191 GTVSMHAHNTPTHTHTYAK*YPSVHV-LS*HTHAQT 87
G + H H T TH HT+A + VH+ ++ HTH T
Sbjct: 99 GHIHTHMH-TYTHAHTHAHIHIHVHIHMNIHTHTCT 133
>AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ41609 fis, clone CTONG3001560. ).
Length = 143
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 88 VCACVCQDNTCTDGYYLAYVCVCVGVLCACIDTVP 192
VC C C ++ VC+CV +CAC +P
Sbjct: 98 VCVHACLVTACACACFVC-VCMCVVTMCACACVLP 131
>AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein.
Length = 274
Score = 29.5 bits (63), Expect = 4.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 88 VCACVCQDNTCTDGYYLAYVCVCVGV 165
VC CVC + CT + YVC CV V
Sbjct: 88 VCICVCA-HVCTCVHSFVYVCGCVHV 112
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 167 NTPTHTHTYAK*YPSVHVLS*HTHAQT 87
+TPTHTHT+A + H+ + H H+ T
Sbjct: 164 HTPTHTHTHALTHSHTHIHT-HMHSHT 189
>M62424-1|AAA36743.1| 425|Homo sapiens thrombin receptor protein.
Length = 425
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 121 TDGYYLAYV-CVCVGVLCACIDTVPY 195
T+ Y AY+ CVCV + +CID + Y
Sbjct: 346 TEAAYFAYLLCVCVSSISSCIDPLIY 371
>BT007279-1|AAP35943.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 121 TDGYYLAYV-CVCVGVLCACIDTVPY 195
T+ Y AY+ CVCV + CID + Y
Sbjct: 346 TEAAYFAYLLCVCVSSISCCIDPLIY 371
>BC051909-1|AAH51909.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 121 TDGYYLAYV-CVCVGVLCACIDTVPY 195
T+ Y AY+ CVCV + CID + Y
Sbjct: 346 TEAAYFAYLLCVCVSSISCCIDPLIY 371
>BC002464-1|AAH02464.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 121 TDGYYLAYV-CVCVGVLCACIDTVPY 195
T+ Y AY+ CVCV + CID + Y
Sbjct: 346 TEAAYFAYLLCVCVSSISCCIDPLIY 371
>AF391809-1|AAK69768.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 121 TDGYYLAYV-CVCVGVLCACIDTVPY 195
T+ Y AY+ CVCV + CID + Y
Sbjct: 346 TEAAYFAYLLCVCVSSISCCIDPLIY 371
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,049,886
Number of Sequences: 237096
Number of extensions: 911199
Number of successful extensions: 1618
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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