Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J19
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069755-1|AAL39900.1|  401|Drosophila melanogaster LP11503p pro...    28   4.1  
AE014298-2080|AAN09346.1|  401|Drosophila melanogaster CG32593-P...    28   4.1  
AY060274-1|AAL25313.1|   55|Drosophila melanogaster GH10751p pro...    28   5.4  

>AY069755-1|AAL39900.1|  401|Drosophila melanogaster LP11503p
           protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 176 HAHNTPTHTHTYAK*YPSVHVLS-*HTH 96
           H+HN  THTHT+ +     H  +  HTH
Sbjct: 12  HSHNETTHTHTHTQTLTHTHTNTLTHTH 39


>AE014298-2080|AAN09346.1|  401|Drosophila melanogaster CG32593-PC,
           isoform C protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 176 HAHNTPTHTHTYAK*YPSVHVLS-*HTH 96
           H+HN  THTHT+ +     H  +  HTH
Sbjct: 12  HSHNETTHTHTHTQTLTHTHTNTLTHTH 39


>AY060274-1|AAL25313.1|   55|Drosophila melanogaster GH10751p
           protein.
          Length = 55

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 188 TVSMHAHNTPTHTHTYAK*YPSVHVLS 108
           T  +H H+T THTHT+   +   H  S
Sbjct: 11  TSLIHQHHTDTHTHTHKPTFTHTHTHS 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,098,824
Number of Sequences: 53049
Number of extensions: 304883
Number of successful extensions: 1015
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)