Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J19
         (403 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    23   1.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.0  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   3.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   4.0  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              20   9.2  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   9.2  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +1

Query: 193 YLKNKFVYARAICEFCFYYCPDVIVIF*HVRACPRLEIY*QVCCSLRYSDIY 348
           +L+N F      CE C Y C +  ++  H+++     +Y   C +  Y+  Y
Sbjct: 7   HLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKS--HSNVYQYRCANCTYATKY 56


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 176 HAHNTPTHTHTYA 138
           H H TP H H++A
Sbjct: 425 HIHATPHHHHSHA 437


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 382 M*NRYVIYNTVHRCRCTVTNNKPVSIFRALDTH 284
           M NR+ ++ TVHR  C +    P+ +   L  H
Sbjct: 316 MENRFPLFTTVHRI-C-IGETMPMELIENLRNH 346


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 316 PVSIFRALDTHARVKILQLHQDNNRNRTHILRAHRQTYF 200
           P SIFR  D H     + +  D+N+  T I++    T +
Sbjct: 389 PRSIFRQTDDHQNSPSIFI-SDDNQKLTGIVQISNMTEY 426


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 136 LAYVCVCVGVL 168
           ++ +CVCVG L
Sbjct: 7   ISAICVCVGAL 17


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 136 LAYVCVCVGVL 168
           ++ +CVCVG L
Sbjct: 7   ISAICVCVGAL 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,216
Number of Sequences: 438
Number of extensions: 1936
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)