Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J17
         (433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   0.71 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.6  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 140 NLEPLRA*HRLAKMPRLYRHQYLPLRRSLKSLYL 39
           N++PL   H        YRH  +PL R  ++L L
Sbjct: 327 NVDPLYLKHEQQGAAPDYRHWQIPLGRRFRALKL 360


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 304 GTVNNNIDISTVSDNS 257
           G VN N D ST ++NS
Sbjct: 426 GNVNENQDCSTPTENS 441


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -3

Query: 329 HLAYRSLYRHS*QQHRYIHSQR*QRYKRPPSHLSLRRICKMLFFLNHIYRSSPFLMLY-- 156
           HL  RS++  +     Y    R QR+    S     R+   +F + H Y +S  +++   
Sbjct: 491 HLIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHCYLASELVLMLKN 550

Query: 155 HYLHLNLE 132
            ++ LN++
Sbjct: 551 RFVTLNVQ 558


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +3

Query: 381 SELTILCEKIAMVKVEL 431
           +E+ +LCEK+A   +++
Sbjct: 258 NEIILLCEKVAKEDIQV 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,678
Number of Sequences: 336
Number of extensions: 1935
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)