Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J17
(433 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1588 + 27942415-27942434,27942561-27942629,27942743-27943550 44 5e-05
07_03_1595 + 28007003-28007031,28007978-28008560,28009088-28009399 44 7e-05
07_03_1587 + 27937243-27937251,27937813-27937872,27938007-279380... 44 7e-05
03_02_0695 + 10472174-10472286,10472390-10473239 44 7e-05
07_03_1594 + 28004256-28004287,28004399-28005290 43 1e-04
07_03_1768 - 29363893-29364010,29364568-29365541 42 2e-04
07_03_1598 + 28019788-28019834,28020404-28021289 42 2e-04
04_03_0828 - 20118303-20119086,20119197-20119240 41 4e-04
02_03_0341 - 17948124-17948183,17948417-17948499,17948668-179487... 39 0.002
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 39 0.002
04_03_0648 - 18393142-18393174,18393259-18393341,18393569-183936... 38 0.005
04_01_0406 - 5345149-5345935,5346302-5346339 38 0.005
04_01_0407 - 5350916-5351699,5351930-5351970 37 0.006
03_06_0569 + 34789286-34790052,34791216-34791512,34791604-347918... 37 0.006
07_03_1589 + 27948546-27948548,27948890-27948958,27949235-279493... 36 0.019
12_01_0844 + 7915121-7915225,7915724-7915777,7915888-7915968,791... 31 0.30
12_02_1230 - 27204881-27205765 30 0.70
10_06_0141 - 11151344-11151531,11151926-11152275,11153119-111532... 29 1.2
11_08_0022 + 27733247-27733935,27735722-27735981,27736213-277364... 29 2.1
02_01_0684 - 5071994-5072134,5072240-5072365,5072452-5072608,507... 28 2.8
12_02_1064 - 25771870-25772102,25772222-25772375,25772487-257725... 27 4.9
11_08_0019 + 27697918-27698609,27701107-27701372,27701778-277019... 27 4.9
06_03_0523 - 21734045-21734301,21734452-21734578 27 6.5
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 27 6.5
02_05_1157 - 34533625-34533875,34535279-34536340,34536673-345368... 27 8.6
>07_03_1588 + 27942415-27942434,27942561-27942629,27942743-27943550
Length = 298
Score = 44.0 bits (99), Expect = 5e-05
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223
KV ++T E F+++GAK + A D+ + G A+ E+ G+ ++ +CD
Sbjct: 34 KVAVITGGASGIGRATAEEFVRNGAKVILA-DVQDDLGHAVAAEL----GADAASYARCD 88
Query: 224 VTT-SDLEAAYTAVIADCGYIDVVVNCAGIMND 319
VT + + AA +A G +DVV N AGI D
Sbjct: 89 VTDEAQVAAAVDLAVARHGRLDVVFNNAGIPGD 121
>07_03_1595 + 28007003-28007031,28007978-28008560,28009088-28009399
Length = 307
Score = 43.6 bits (98), Expect = 7e-05
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +2
Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223
KV ++T + F+++GAK + A D+ + G+A+ E+ G+ ++ CD
Sbjct: 42 KVAVITGAASGIGEATAKEFVRNGAKVILA-DIQDDLGRAVAGEL----GADAASYTHCD 96
Query: 224 VTT-SDLEAAYTAVIADCGYIDVVVNCAGIMNDRP 325
VT +D+ AA +A G +DVV + AGI P
Sbjct: 97 VTVEADVAAAVDLAVARHGRLDVVYSNAGIAGGAP 131
>07_03_1587 +
27937243-27937251,27937813-27937872,27938007-27938008,
27938208-27939012
Length = 291
Score = 43.6 bits (98), Expect = 7e-05
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223
KV ++T F+++GAK + A D+ + G+A+ E+ G+ ++ +CD
Sbjct: 28 KVAVITGAASGIGKATAAEFVRNGAKVILA-DVQDDVGRAVASEL----GADAASYTRCD 82
Query: 224 VTT-SDLEAAYTAVIADCGYIDVVVNCAGIM 313
VT + + AA +A G +DV+VN AGI+
Sbjct: 83 VTDEAQVAAAVDLAVARHGQLDVMVNNAGIV 113
>03_02_0695 + 10472174-10472286,10472390-10473239
Length = 320
Score = 43.6 bits (98), Expect = 7e-05
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 35 VQDKVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFY 214
++ KV +VT V F++ GAK V A D+D G+AL + + F
Sbjct: 39 LEGKVAIVTGGARGIGEAIVRLFVKHGAKVVIA-DIDDAAGEALAAAL-----GPHVGFV 92
Query: 215 KCDVTTS-DLEAAYTAVIADCGYIDVVVNCAGIM 313
+CDV+ D+E A +A G +DV+ N AG++
Sbjct: 93 RCDVSVEEDVERAVERAVARYGRLDVLCNNAGVL 126
>07_03_1594 + 28004256-28004287,28004399-28005290
Length = 307
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 35 VQDKVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFY 214
++ KV ++T + F+++GAK + A D+ + G+A+ E+ G+ ++
Sbjct: 40 LEGKVAVITGAVGGIGEATAKEFVRNGAKVILA-DIQDDLGRAMAAEL----GADAASYT 94
Query: 215 KCDVTT-SDLEAAYTAVIADCGYIDVVVNCAGI 310
CDVT +D+ AA +A G +DVV + AGI
Sbjct: 95 HCDVTVEADVAAAVDLAVARHGRLDVVYSNAGI 127
>07_03_1768 - 29363893-29364010,29364568-29365541
Length = 363
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 35 VQDKVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFY 214
++ KV +VT V AF+ GA V A D+D G AL + G T+
Sbjct: 71 LEGKVAIVTGGSRGIGEAIVRAFVHHGALVVVA-DIDDAGGHALAAAL----GPHACTYV 125
Query: 215 KCDVTT-SDLEAAYTAVIADCGYIDVVVNCAGIM 313
CDV +D+E A + G +DV+ N AG++
Sbjct: 126 HCDVAEEADVERAVATTLEQHGRLDVLCNNAGVL 159
>07_03_1598 + 28019788-28019834,28020404-28021289
Length = 310
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +2
Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223
KV ++T + F+++GAK + A D+ + G+A+ E+ G+ ++ CD
Sbjct: 46 KVAVITGAASGIGEATAKEFVRNGAKVIIA-DIQDDLGRAVAAEL----GADAASYTHCD 100
Query: 224 VTTS-DLEAAYTAVIADCGYIDVVVNCAGIM 313
VT D+ AA +A G +DVV + AG++
Sbjct: 101 VTVEKDVAAAVDLAVARHGRLDVVYSNAGVI 131
>04_03_0828 - 20118303-20119086,20119197-20119240
Length = 275
Score = 41.1 bits (92), Expect = 4e-04
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 HEASLKAVMFSVQDKVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMI 181
HE++ K V KV L+T F++ GA+ V A D+ G L E+
Sbjct: 10 HESARKLV-----GKVALITGGASGIGECTARLFVKHGAQVVVA-DIQDEAGARLCAEL- 62
Query: 182 DKYGSKRITFYKCDVTTSD-LEAAYTAVIADCGYIDVVVNCAGI 310
GS ++ +CDVT+ D + AA +A G +DV+ N AGI
Sbjct: 63 ---GSATASYVRCDVTSEDDVAAAVDHAVARYGKLDVMFNNAGI 103
>02_03_0341 -
17948124-17948183,17948417-17948499,17948668-17948761,
17948848-17948982,17949099-17949131,17949207-17949301,
17949394-17949439,17949517-17949597,17949874-17949927,
17950361-17950506,17952192-17952330
Length = 321
Score = 39.1 bits (87), Expect = 0.002
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Frame = +2
Query: 47 VILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCDV 226
V++VT AF + G K + + + + KE I+ +G + ITF + DV
Sbjct: 71 VVVVTGASRGIGKAIALAFGKAGCKVLVNYARSSTDAEEVCKE-IEGFGGQAITF-RGDV 128
Query: 227 TT-SDLEAAYTAVIADCGYIDVVVNCAGIMNDRPNVYLKE------IAVNVTALVTSSFR 385
+ +D+++ A + G IDV+VN AGI D + +K+ + +N+T + +
Sbjct: 129 SNEADVDSMIKAAVDTWGTIDVLVNNAGITRDTLLLRMKKSQWQDVVDLNLTGVFLCTQA 188
Query: 386 AYDLMRKDRDGK 421
A +M K + G+
Sbjct: 189 ATKVMMKKKKGR 200
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Frame = +2
Query: 209 FYKCDVTTS-DLEAAYTAVIADCGYIDVVVNCAGI---------MNDRPNVYLKEIAVNV 358
F KCDVT + DL AA+ + G +D+ +NCAGI +D + + + VN+
Sbjct: 68 FIKCDVTNAGDLSAAFGKHVDTYGGLDICINCAGIAIKTLVYDDRSDGTSTWRHAVNVNL 127
Query: 359 TALVTSSFRAYDLMRKDR 412
A++ + A +MR +
Sbjct: 128 VAVIDGTRIASQIMRSGK 145
>04_03_0648 -
18393142-18393174,18393259-18393341,18393569-18393662,
18393746-18393880,18394190-18394222,18394302-18394396,
18394494-18394539,18394639-18394719,18395464-18395517,
18395809-18395951,18397645-18397804
Length = 318
Score = 37.5 bits (83), Expect = 0.005
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Frame = +2
Query: 47 VILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCDV 226
V++VT A + G K + + + KE I+ G + ITF
Sbjct: 77 VVIVTGASRGIGKATALALGKAGCKVLVNYARSSKEAEEVSKE-IEACGGQAITFGGDVS 135
Query: 227 TTSDLEAAYTAVIADCGYIDVVVNCAGIMNDRPNVYLKE------IAVNVTALVTSSFRA 388
+D+++ A + G IDV+VN AGI D + +K+ I +N+T + + A
Sbjct: 136 KEADVDSMMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAA 195
Query: 389 YDLMRKDRDGK 421
+M K + GK
Sbjct: 196 TKIMMKKKKGK 206
>04_01_0406 - 5345149-5345935,5346302-5346339
Length = 274
Score = 37.5 bits (83), Expect = 0.005
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223
KV ++T F++ GA+ V A D+ G +L E+ G ++ CD
Sbjct: 17 KVAVITGGASGIGACTARLFVKHGARVVVA-DIQDELGASLVAEL----GPDASSYVHCD 71
Query: 224 VTTS-DLEAAYTAVIADCGYIDVVVNCAGI 310
VT D+ AA +A G +DV+ N AG+
Sbjct: 72 VTNEGDVAAAVDHAVATFGKLDVMFNNAGV 101
>04_01_0407 - 5350916-5351699,5351930-5351970
Length = 274
Score = 37.1 bits (82), Expect = 0.006
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223
KV ++T F++ GA+ V A D+ G +L E+ G ++ CD
Sbjct: 18 KVAVITGGASGIGACTARLFVKHGARVVVA-DIQDELGASLVAEL----GPDASSYVHCD 72
Query: 224 VTTS-DLEAAYTAVIADCGYIDVVVNCAGI 310
VT D+ AA +A G +DV+ N AG+
Sbjct: 73 VTNEGDVAAAVDHAVARFGKLDVMFNNAGV 102
>03_06_0569 +
34789286-34790052,34791216-34791512,34791604-34791835,
34792334-34792391,34792800-34792931,34793108-34793246,
34793460-34793622,34793693-34793734
Length = 609
Score = 37.1 bits (82), Expect = 0.006
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223
KV +VT F GA V A D+ G+A+ + G R + +CD
Sbjct: 4 KVAIVTGGASGIGEAAARLFASCGATVVIA-DVQDELGEAVAASVAG--GGCR--YVRCD 58
Query: 224 VTT-SDLEAAYTAVIADCGYIDVVVNCAGIM 313
VT + +EAA A +A+ G +DV+V+ AG++
Sbjct: 59 VTDEAQVEAAVAAAVAEHGRLDVMVSNAGVL 89
>07_03_1589 +
27948546-27948548,27948890-27948958,27949235-27949335,
27949460-27950173,27951172-27951333,27951669-27952458
Length = 612
Score = 35.5 bits (78), Expect = 0.019
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +2
Query: 32 SVQDKVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITF 211
S+ KV ++T + F+++GAK + A DV + L K G ++
Sbjct: 350 SLAGKVAIITGGASGIGKVTAKEFIKNGAKVIIA---DVQD--ELGHSAAAKLGPDA-SY 403
Query: 212 YKCDVTT-SDLEAAYTAVIADCGYIDVVVNCAGIMNDRP 325
CDVT + +EAA + G++D++ N AGI+ P
Sbjct: 404 THCDVTDEAQVEAAVDLAVRLHGHLDILYNNAGIIGAMP 442
>12_01_0844 +
7915121-7915225,7915724-7915777,7915888-7915968,
7916164-7916209,7916311-7916405,7916581-7916613,
7916941-7917286,7917372-7917511
Length = 299
Score = 31.5 bits (68), Expect = 0.30
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +2
Query: 179 IDKYGSKRITFYKCDVTT-SDLEAAYTAVIADCGYIDVVVNCAGIMNDRPNVYLKE---- 343
I++ G ITF DV+ +++E+ A I G +DV+VN AGI D + +K
Sbjct: 54 IEESGGTAITF-SADVSIEAEVESMMRAAIDTWGTLDVLVNNAGITRDALLMRMKRTQWQ 112
Query: 344 --IAVNVTALVTSSFRAYDLMRKDRDGK 421
+ VN+T + + A +M + G+
Sbjct: 113 EVVDVNLTGVYLCAQAAAGVMMMKKKGR 140
>12_02_1230 - 27204881-27205765
Length = 294
Score = 30.3 bits (65), Expect = 0.70
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 221 DVTTSD-LEAAYTAVIADCGYIDVVVNCAGIMNDRPNVYLKEIAV 352
DVT+ + +E A V+A+ G +DV+VN AGI P L+ AV
Sbjct: 68 DVTSDESVEGAVARVLAEHGRVDVLVNNAGIGCTGPLAELRGEAV 112
>10_06_0141 -
11151344-11151531,11151926-11152275,11153119-11153274,
11153505-11153674,11155431-11155589,11157139-11157447,
11157550-11157750
Length = 510
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 230 SLRRICKMLFFLNHIYRSSPFLMLYHYLHLNLEPLRA*HRLAKMPRLYRHQYLPLRRSLK 51
++ + +++ FL H Y SSP L+ L+ EPL L + R Y+ Y +R+
Sbjct: 318 NIAQTVQVIDFLTHRYASSPSLLAVELLN---EPLAPGVTLPALMRYYKDGYNAVRKYTS 374
Query: 50 SLYL 39
+ Y+
Sbjct: 375 TAYV 378
>11_08_0022 +
27733247-27733935,27735722-27735981,27736213-27736404,
27737695-27738686
Length = 710
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 233 SDLEAAYTAVIADCGYIDVVVNCAGIMNDRPNVYLKEIAVNVTALVTSSFRAYD 394
S L+ + +V AD GYID V G + +VY + V L+T YD
Sbjct: 581 SVLKTKHRSVCADMGYIDPVYMVTGNFRLKSDVY--SFGIVVLELITRKKAVYD 632
>02_01_0684 -
5071994-5072134,5072240-5072365,5072452-5072608,
5073115-5073224,5073309-5073456,5073581-5073735,
5074144-5074249,5074337-5074436,5074775-5074880,
5075013-5075444
Length = 526
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 137 DLDVNNGKALEKEMIDKYGSKRITFYKCDVTTSDLEAAYTA-VIADCGYIDVV 292
+LD ++ ++KE + KYG+ +T+ D S++ +T+ V GY D V
Sbjct: 316 ELDTDHDFFIDKENLIKYGNHALTYRIVDRIFSEVPRKFTSKVEGKMGYEDFV 368
>12_02_1064 -
25771870-25772102,25772222-25772375,25772487-25772569,
25772669-25772762,25773647-25773799,25774388-25774510
Length = 279
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 161 ALEKEMIDKYGSKRITFYKCDVTT-SDLEAAYTAVIADCGYIDVVVNCAGIMNDRPNV 331
A+E + + + +R+ DVT S +EAA ++ G +++++N GI++ PNV
Sbjct: 64 AVELQKLRQEHEQRLAVLPLDVTDESTIEAAAASIGETHGSLNLLINATGILS-IPNV 120
>11_08_0019 +
27697918-27698609,27701107-27701372,27701778-27701948,
27702187-27703166,27703723-27703804,27704148-27704170
Length = 737
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 260 VIADCGYIDVVVNCAGIMNDRPNVYLKEIAVNVTALVTSSFRAYD 394
V+ D YID V GI+ ++ +VY V + L+T YD
Sbjct: 595 VVGDINYIDPVYMKTGILTEKSDVY--SFGVVLLELITRKKARYD 637
>06_03_0523 - 21734045-21734301,21734452-21734578
Length = 127
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 137 LEPLRA*HRLAKMPRLYRHQYLPLRRSL 54
+EPL A R PR RH+ PL RSL
Sbjct: 86 MEPLGARRRTRAPPRRLRHRRHPLTRSL 113
>02_01_0451 -
3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 201 E*HFTNAT*RQVTWRPLIPLLSLTVDISMLLLTVP 305
E H+ N R V W +I +L ++I +L TVP
Sbjct: 500 EVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVP 534
>02_05_1157 -
34533625-34533875,34535279-34536340,34536673-34536837,
34536993-34537941
Length = 808
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = +2
Query: 182 DKYGSKRITFYKCDVTTSDLEAAYTAVIADCGYIDVVVNCAGIMNDRPNVYLKEIAVNVT 361
DK +K F + +D A T V CGY+D + D+ +VY V V
Sbjct: 575 DKLNAKVADFGASKLAPTDEAAIATLVQGTCGYLDPEYLMTCQLTDKSDVY--SFGVVVL 632
Query: 362 ALVTSSFRAY 391
L+T Y
Sbjct: 633 ELLTRKKALY 642
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,085,155
Number of Sequences: 37544
Number of extensions: 184939
Number of successful extensions: 463
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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