BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_J17 (433 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 51 5e-07 SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05 SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 38 0.005 SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.043 SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 33 0.10 SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 30 0.93 SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 29 2.2 SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07) 28 2.8 SB_15679| Best HMM Match : p450 (HMM E-Value=1.9e-37) 28 3.8 SB_55834| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0 SB_42378| Best HMM Match : MgtC (HMM E-Value=1.8) 27 5.0 SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98) 27 6.6 SB_4493| Best HMM Match : RrnaAD (HMM E-Value=0.014) 27 6.6 SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 27 6.6 >SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) Length = 201 Score = 50.8 bits (116), Expect = 5e-07 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Frame = +2 Query: 35 VQDKVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFY 214 ++ V +VT +A L K V LD++ G K + + Y R+ F Sbjct: 3 IEGTVAIVTGGVQGIGLAISKALLDRDGK-VCMLDINEKTGNETLKLLSENYSKHRVLFI 61 Query: 215 KCDVTTS-DLEAAYTAVIADCGYIDVVVNCAGIM---ND--RPNVYLKEIAVNVTALVTS 376 KCDVT+ +EAA+ G +D++ N AGI ND R + I +NV ++ Sbjct: 62 KCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSGAWKTIIDINVKGVILG 121 Query: 377 SFRAYDLMR-KDRDGKGGTI 433 + D M G GGTI Sbjct: 122 TLLGLDHMGVSGAKGHGGTI 141 >SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 609 Score = 44.8 bits (101), Expect = 3e-05 Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Frame = +2 Query: 125 VAALDLDVNNGKALEKEMIDKYGSKRITFYKCDVTTSD-LEAAYTAVIADCGYIDVVVNC 301 V +DL G + + +K+GS ++F CDV+ D L+ A+ ++ G++D+V N Sbjct: 24 VVLVDLQKKAGNDVTCLLQNKHGSGSVSFISCDVSNQDQLKDAFWETVSTHGHLDIVFNN 83 Query: 302 AGIMNDRPNVYLKEIAVNVTALVTSSFRAYDLMRKD 409 AGI+++ + K + VN+ + + + R++ Sbjct: 84 AGILDEER--WSKTLDVNLLNSIEPRYNEHHYNRRE 117 >SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) Length = 256 Score = 37.5 bits (83), Expect = 0.005 Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Frame = +2 Query: 125 VAALDLDVNNGKALEKEMIDKYGSKRITFYKCDVTTSD-LEAAYTAVIADCGYIDVVVNC 301 V +D+ +N+G ++ + ++G F +CDV + L A + D +D++ N Sbjct: 66 VRIIDICINSGLKAQENLEAQFGPGTAEFIECDVCNREKLSEAIRQTVKDHSKLDILCNN 125 Query: 302 AGIMNDRPNVYLKEIAVNVTALVTSSFRAY 391 AGI++++ + K + +N+ + + Y Sbjct: 126 AGIIDEKN--WPKSVELNLFSQFIEGYSGY 153 >SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 365 Score = 34.3 bits (75), Expect = 0.043 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%) Frame = +2 Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCD 223 +V +VT VE ++GA VA LD++ G+ +E ++ + ++ FY D Sbjct: 25 RVAIVTGGASGIGKATVERLAREGAS-VAILDINDELGQQVETDL--RSSGNKVKFYHVD 81 Query: 224 VTTSDLEA-AYTAVIADCG-YIDVVVNCAGIMNDR 322 V D+ A V AD G + ++VN A + Sbjct: 82 VANKDMCAHVVGCVAADHGSAVHILVNNAAYFGSK 116 >SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) Length = 717 Score = 33.1 bits (72), Expect = 0.10 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Frame = +2 Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKHVAALDL------DVNNGKALEK--EMIDKYGSK 199 +V+LVT AF + GA V DL + +G+A +K + I G K Sbjct: 11 RVVLVTGAGNGLGRQYALAFAERGAS-VVVNDLGGDTKGEGKSGRAADKVVQEIRAKGGK 69 Query: 200 RITFYKCDVTTSDLEAAYTAVIADCGYIDVVVNCAGIMNDRPNVYLKEI 346 + Y V D + TA+ A G IDVVVN AGI+ D+ + + E+ Sbjct: 70 AVADYN-SVEQGD-QVVETAIKA-FGRIDVVVNNAGILRDKSILRMSEL 115 >SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) Length = 527 Score = 29.9 bits (64), Expect = 0.93 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%) Frame = +2 Query: 44 KVILVTXXXXXXXXXXVEAFLQDGAKH--VAALDLDVNNGKALEKEMIDKYGSKRITFYK 217 KV ++T +DG K V A +++ +LE + G + + Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEKRFRVYATMRNLDKKGSLESACQNALGDT-LFIRE 62 Query: 218 CDVTTSD-LEAAYTAVIADCGYIDVVVNCAGI 310 DV++ D +E A A+ + G ID++VN AGI Sbjct: 63 LDVSSDDSVEEALNAIYEEEGRIDILVNNAGI 94 >SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) Length = 603 Score = 28.7 bits (61), Expect = 2.2 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Frame = +2 Query: 35 VQDKVILVTXXXXXXXXXXVEAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFY 214 ++ +V +VT +A + G K VA L E+I G I+ Sbjct: 102 LEGQVAIVTGASSGIGAAVAKALAEAGVK-VALAARREERLTQLRDEIIAN-GDVAISV- 158 Query: 215 KCDVTTSD-LEAAYTAVIADCGYIDVVVNCAGIM 313 K DVT + +E+ + G +D++V+CAG+M Sbjct: 159 KTDVTIKEQMESLVKRTDSTLGPVDILVSCAGVM 192 >SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07) Length = 827 Score = 28.3 bits (60), Expect = 2.8 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 122 HVAALDLDVNNGKALEKEMIDKYGSKRITFYKCDVTTSDLE 244 HV AL ++ NG+ + ++ + GSK +T Y C +D E Sbjct: 464 HVQALPINERNGQHILRDSVTSPGSKVLTMY-CKKQDNDKE 503 >SB_15679| Best HMM Match : p450 (HMM E-Value=1.9e-37) Length = 492 Score = 27.9 bits (59), Expect = 3.8 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +2 Query: 95 EAFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITF--YKCDVTTSDLE 244 E+F+ AK L + + +E+ +KYG +T+ +K +VT +DLE Sbjct: 50 ESFIWGNAKEFQRLQKHGKRKEEILRELSEKYGPVFVTWEIHKPEVTITDLE 101 >SB_55834| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 224 Score = 27.5 bits (58), Expect = 5.0 Identities = 14/54 (25%), Positives = 26/54 (48%) Frame = -3 Query: 233 LSLRRICKMLFFLNHIYRSSPFLMLYHYLHLNLEPLRA*HRLAKMPRLYRHQYL 72 +S + M ++H Y ++ F+ML H+ + + + H L M + H YL Sbjct: 17 MSNHYLTTMFVMMSHHYLTTMFVMLSHHYLTTMFVMMSHHYLTTMFVIMSHHYL 70 Score = 27.5 bits (58), Expect = 5.0 Identities = 14/54 (25%), Positives = 26/54 (48%) Frame = -3 Query: 233 LSLRRICKMLFFLNHIYRSSPFLMLYHYLHLNLEPLRA*HRLAKMPRLYRHQYL 72 +S + M L+H Y ++ F+M+ H+ + + + H L M + H YL Sbjct: 29 MSHHYLTTMFVMLSHHYLTTMFVMMSHHYLTTMFVIMSHHYLTTMFVIMAHHYL 82 Score = 27.1 bits (57), Expect = 6.6 Identities = 14/54 (25%), Positives = 26/54 (48%) Frame = -3 Query: 233 LSLRRICKMLFFLNHIYRSSPFLMLYHYLHLNLEPLRA*HRLAKMPRLYRHQYL 72 LS + M ++H Y ++ F+++ H+ + + A H L M + H YL Sbjct: 41 LSHHYLTTMFVMMSHHYLTTMFVIMSHHYLTTMFVIMAHHYLTTMFVIMSHHYL 94 >SB_42378| Best HMM Match : MgtC (HMM E-Value=1.8) Length = 173 Score = 27.5 bits (58), Expect = 5.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 116 AKHVAALDLDVNNGKALEKEMIDKYGSKRI 205 A+ V LD+N G+A +K IDK G++ + Sbjct: 134 ARTVNKKPLDINGGRARQKAEIDKCGNETV 163 >SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98) Length = 997 Score = 27.1 bits (57), Expect = 6.6 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = +1 Query: 301 CRYNER*A-KCLPKGDSC*RYSISYE 375 C YN++ A KCLP+G+ R S YE Sbjct: 51 CSYNKKEAFKCLPQGNGRIRISTCYE 76 >SB_4493| Best HMM Match : RrnaAD (HMM E-Value=0.014) Length = 192 Score = 27.1 bits (57), Expect = 6.6 Identities = 13/52 (25%), Positives = 30/52 (57%) Frame = +2 Query: 98 AFLQDGAKHVAALDLDVNNGKALEKEMIDKYGSKRITFYKCDVTTSDLEAAY 253 + L GA+HVAA+++D +L ++++ R+T + D+ ++ +A+ Sbjct: 64 SILNAGARHVAAVEIDRRFLPSL--QLLEDAAKGRMTLHHADIMKFNIPSAF 113 >SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) Length = 249 Score = 27.1 bits (57), Expect = 6.6 Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 1/125 (0%) Frame = -2 Query: 384 LNELVTNAVTLTAISFR*TFGLSFIIPAQLTTTSIYPQSAITA-V*AASKSLVVTSHL*N 208 ++ ++ T T IS T + II TTTS + ITA + + ++ +T+ + Sbjct: 109 ISTTISTTTTTTTISTTTTTITAVIISTTTTTTSTANTTTITATITTTTTTITITATITT 168 Query: 207 VILFEPYLSIISFSNALPLFTSKSRAATCLAPSCKNASTXXXXXXXXXPVTKITLS*TLN 28 + + S P T + +T + + +T +T + T+N Sbjct: 169 ITTTITATITTTISTTTPFIT--ATISTTITTTITTTTTITTTTTTIYTITTTIIIITIN 226 Query: 27 MTAFK 13 ++ K Sbjct: 227 ISQSK 231 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,059,297 Number of Sequences: 59808 Number of extensions: 229610 Number of successful extensions: 587 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 523 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 585 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 822495283 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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