Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J17
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   1.5  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   1.5  
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    23   6.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   6.1  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 140 NLEPLRA*HRLAKMPRLYRHQYLPLRRSLKSLYL 39
           N++PL   H +      YRH  +PL R  ++L L
Sbjct: 333 NVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKL 366


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 140 NLEPLRA*HRLAKMPRLYRHQYLPLRRSLKSLYL 39
           N++PL   H +      YRH  +PL R  ++L L
Sbjct: 364 NVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKL 397


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 319 IVHYTGTVNNNIDISTVSDNSGISG 245
           +VHYTGT    +D  TV D+S   G
Sbjct: 24  VVHYTGT----LDDGTVFDSSRTRG 44


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 251 KRPPSHLSLRRICKMLFFLNH 189
           KR PS+L +RR     +F  H
Sbjct: 244 KRKPSNLEIRRQLSFQYFSTH 264



 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 215 KCDVTTSDLEAAYTAVIADCGYIDVVV 295
           + +VT  D+   YT+ +    YID V+
Sbjct: 184 RSNVTICDMRKEYTSQMEIFNYIDTVI 210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,948
Number of Sequences: 2352
Number of extensions: 7520
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)