Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J16
         (520 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q95Z74 Cluster: Cell adhesion molecule; n=1; Ostertagia...    33   3.9  
UniRef50_Q0CY58 Cluster: Predicted protein; n=1; Aspergillus ter...    33   5.2  
UniRef50_UPI0000499B82 Cluster: hypothetical protein 43.t00010; ...    32   9.0  

>UniRef50_Q95Z74 Cluster: Cell adhesion molecule; n=1; Ostertagia
           ostertagi|Rep: Cell adhesion molecule - Ostertagia
           ostertagi
          Length = 197

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +1

Query: 73  ESRPEIPTKTPRGRPLTLQHLGIFIDESVIFNKLNISKLSYCKPNSTIKKN 225
           E RP IP  T  G PLT+   G F+D S      N   +   +    +KKN
Sbjct: 119 EERPSIPLLTVDGEPLTVDESGHFVDSSGAIIPTNEDGIPVDEYGRPLKKN 169


>UniRef50_Q0CY58 Cluster: Predicted protein; n=1; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 327

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +1

Query: 64  HPGESRPEIPTKTPRGRPLTLQHLGIFIDESVIFNKLNISKLSYCKPNSTIKKNTTLYNS 243
           HP + R  +P   P  RP  LQ   +F    +    + I++L     N T++ N T + S
Sbjct: 173 HPNKLRHMLPGTAPTNRPRKLQLAALF-TVGLFIVAITIARLPQNAENPTVQVNRTTWAS 231

Query: 244 IQI 252
           I++
Sbjct: 232 IEL 234


>UniRef50_UPI0000499B82 Cluster: hypothetical protein 43.t00010;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 43.t00010 - Entamoeba histolytica HM-1:IMSS
          Length = 78

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 334 IFTYPLNIYETYYQLSTFMTSSFCQTSVNKYTFVYHQISSNSI 462
           +F Y L+    Y  LSTF+ SS   TS   +  +YH  SS SI
Sbjct: 1   MFYYTLSSLFLYSLLSTFILSSSYSTSYFLFILLYHSFSSFSI 43


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,638,995
Number of Sequences: 1657284
Number of extensions: 8856980
Number of successful extensions: 23611
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23604
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)