Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J16
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 274 FVSAHFI*FV*NYTKLYFFLLLSLVCNRIIY*Y 176
           F+  H + +  NY   ++ LLL L+ + I+  Y
Sbjct: 146 FLCRHTVEYFQNYIHFFYQLLLYLITDMILMRY 178


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 281 IFFRICTLHLICIELYKVVFFFIV 210
           I F +  L L+CI  + V  FF++
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLL 144



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 281 IFFRICTLHLICIELYKVVFFFI 213
           IFF +  L L+C++ + +   F+
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFL 209


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 302 NKNYTYYINNSYSLI 346
           NKN TY + N Y L+
Sbjct: 24  NKNNTYLVLNKYLLV 38


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -3

Query: 56  HWHGARHSVPPYL 18
           HWHG      PY+
Sbjct: 134 HWHGHHQKNSPYM 146


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 400 FCQTSVNKYTFVY 438
           FC+  VN Y F Y
Sbjct: 113 FCRDRVNPYLFYY 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,616
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)