Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J16
(520 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 25 0.62
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 1.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 1.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.9
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.9
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.9
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.5
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.6
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 24.6 bits (51), Expect = 0.62
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 67 PGESRPEIPTKTPRGRPLTLQHLGIFI 147
PG PE+ K P G+P+ + G+ +
Sbjct: 76 PGYLSPEVLKKEPYGKPVDIWACGVIL 102
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 239 ILYKLNEVCRYEKIFGLNSILNKNYTYYINNSYSLIH 349
I+ L+ +Y N+ N NY NN+Y ++
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLY 117
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 239 ILYKLNEVCRYEKIFGLNSILNKNYTYYINNSYSLIH 349
I+ L+ +Y N+ N NY NN+Y ++
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLY 117
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 290 NSILNKNYTY-YINNSYS 340
N+I N NY Y Y NN+Y+
Sbjct: 87 NTIHNNNYKYNYNNNNYN 104
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 290 NSILNKNYTY-YINNSYS 340
N+I N NY Y Y NN+Y+
Sbjct: 87 NTIHNNNYKYNYNNNNYN 104
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 290 NSILNKNYTY-YINNSYS 340
N+I N NY Y Y NN+Y+
Sbjct: 88 NTIHNNNYKYNYNNNNYN 105
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 290 NSILNKNYTY-YINNSYS 340
N+I N NY Y Y NN+Y+
Sbjct: 88 NTIHNNNYKYNYNNNNYN 105
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 290 NSILNKNYTY-YINNSYS 340
N+I N NY Y Y NN+Y+
Sbjct: 88 NTIHNNNYKYNYNNNNYN 105
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 290 NSILNKNYTY-YINNSYS 340
N+I N NY Y Y NN+Y+
Sbjct: 88 NTIHNNNYKYNYNNNNYN 105
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 290 NSILNKNYTYYINNSYSLIH*IFMKLI 370
N+ N NY Y NN+Y+ ++ +I
Sbjct: 331 NNNYNNNYNNYNNNNYNNYKKLYYNII 357
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 302 NKNYTYYINNSYS 340
N NY Y NN Y+
Sbjct: 93 NNNYKYNYNNKYN 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,001
Number of Sequences: 438
Number of extensions: 3032
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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