Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J15
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.009
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    27   0.15 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    27   0.15 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   0.78 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   0.78 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.009
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 309 YFFFCIPFITHVHHIKHIISLYYFSVCIIIMELYNVSGLLLCASLFF 169
           Y+F+C  FI    H+  ++ +Y+F    II  ++    L  CA +FF
Sbjct: 147 YYFYCA-FIIFTVHLLFLLCIYHFFCAFIIFTMHL---LFCCAFIFF 189



 Score = 29.1 bits (62), Expect = 0.028
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 309 YFFFCIPFITHVHHIKHIISLYYFSVCIIIM 217
           +  FC  FI    H+  ++ +YYF   +II+
Sbjct: 265 HLLFCCAFIIFTMHLLFLLCIYYFYCALIIL 295



 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -1

Query: 309 YFFFCIPFITHVHHIKHIISLYYFSVCIII---MELYNVSGLLLCASLFFMVLL 157
           Y+F+C+    +V H+  ++   YF+V ++      ++ V   LLC   F+   +
Sbjct: 57  YYFYCVSITFNV-HLLFLLCSGYFTVHLLFYCPFIIFTVH-FLLCTYYFYYAFI 108



 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 306 FFFCIPFITHVHHIKHIISLYYFSVCIIIM 217
           ++F   FI    H+  ++ +YYF V +  +
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFL 143



 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = -1

Query: 309 YFFFCIPFITHVHHIKHIISLYYFSVCII----IMELYNVSGLLLCASLFFMVLL 157
           +  FC  FI    H+  ++ L YF++ ++    I   Y+   +     LF+ VL+
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLI 233



 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/54 (18%), Positives = 24/54 (44%)
 Frame = -1

Query: 318 TKNYFFFCIPFITHVHHIKHIISLYYFSVCIIIMELYNVSGLLLCASLFFMVLL 157
           T +  F+C   I  VH +      YY  + ++ +  +  + ++    L F++ +
Sbjct: 80  TVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCI 133



 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 306 FFFCIPFITHVHHIKHIISLYYF 238
           ++F   FI    H+  ++ +YYF
Sbjct: 239 YYFYYAFILFTVHLLLLVCIYYF 261


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 8/35 (22%), Positives = 23/35 (65%)
 Frame = -1

Query: 273 HHIKHIISLYYFSVCIIIMELYNVSGLLLCASLFF 169
           HH+  ++ L+  +  I+++ ++ VS +++  ++FF
Sbjct: 510 HHLSKLVKLFNETFGIVLLLMFGVSFVVIVITIFF 544


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 8/35 (22%), Positives = 23/35 (65%)
 Frame = -1

Query: 273 HHIKHIISLYYFSVCIIIMELYNVSGLLLCASLFF 169
           HH+  ++ L+  +  I+++ ++ VS +++  ++FF
Sbjct: 235 HHLSKLVKLFNETFGIVLLLMFGVSFVVIVITIFF 269


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 303 FFCIPFITHVHHIKHIISLYYFSVCIIIMELYNVSGLL-LCASLFFMVLLKKLS 145
           F C+PF ++  ++ +I + Y   +  I   +  ++G     A L  MV+  K S
Sbjct: 79  FLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMFYKRS 132


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 303 FFCIPFITHVHHIKHIISLYYFSVCIIIMELYNVSGLL-LCASLFFMVLLKKLS 145
           F C+PF ++  ++ +I + Y   +  I   +  ++G     A L  MV+  K S
Sbjct: 35  FLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMFYKRS 88


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 381 GFETELHPCRGTPASLTYIVIFANNNNHSCS 473
           G++   H   G PA     VI  N  N SCS
Sbjct: 426 GYDLNQHLQTGLPAGSYCDVISGNAENGSCS 456


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 381 GFETELHPCRGTPASLTYIVIFANNNNHSCS 473
           G++   H   G PA     VI  N  N SCS
Sbjct: 427 GYDLNQHLQTGLPAGSYCDVISGNAENGSCS 457


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 381 GFETELHPCRGTPASLTYIVIFANNNNHSCS 473
           G++   H   G PA     VI  N  N SCS
Sbjct: 427 GYDLNQHFETGLPAGSYCDVISGNAENGSCS 457


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +3

Query: 420 ASLTYIVIFA-----NNNNHSCSMIYDGFTITNYINIFLSRVCNHYYTILRV 560
           A+LT  +IF          +S  +++    +  +IN+ +     HY  ILRV
Sbjct: 156 ATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRV 207


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +3

Query: 420 ASLTYIVIFA-----NNNNHSCSMIYDGFTITNYINIFLSRVCNHYYTILRV 560
           A+LT  +IF          +S  +++    +  +IN+ +     HY  ILRV
Sbjct: 156 ATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRV 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,399
Number of Sequences: 336
Number of extensions: 2297
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)