Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J15
         (564 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putati...    27   6.5  
At3g26940.1 68416.m03373 protein kinase family protein contains ...    27   8.7  

>At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putative
           / NADPH-ferrihemoprotein reductase, putative similar to
           NADPH-ferrihemoprotein reductase NADPH-cytochrome P450
           oxydoreductase isoform 1 [Populus balsamifera subsp.
           trichocarpa x Populus deltoides] GI:13183562, SP|P37116
           NADPH-cytochrome P450 reductase (EC 1.6.2.4) (CPR)
           [Vigna radiata] {Phaseolus aureus}
          Length = 692

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 329 LINQLKTISFSASHSLHTFII*NTSSLFTTSPFVLLSWNYTT 204
           L  QLK+I  + S S    ++  T+SL   + FV+L W  TT
Sbjct: 10  LFKQLKSIMGTDSLSDDVVLVIATTSLALVAGFVVLLWKKTT 51


>At3g26940.1 68416.m03373 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 432

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 333 YRCEVFKFRE*ARAVRGFETE 395
           YRC++F +RE A A   F  E
Sbjct: 57  YRCQIFSYRELAIATNSFRNE 77


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,904,933
Number of Sequences: 28952
Number of extensions: 192164
Number of successful extensions: 442
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)