Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J14
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 270 4e-73
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 270 5e-73
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 260 3e-70
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 220 5e-58
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 144 3e-35
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 142 1e-34
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 141 3e-34
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 139 1e-33
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 138 2e-33
03_01_0034 + 318432-318825,318902-319851 137 4e-33
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 123 8e-29
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 120 4e-28
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 94 6e-20
12_01_0468 + 3661177-3661626 29 1.4
09_01_0060 - 942762-943448,943840-943867,944044-944077,944383-94... 29 1.4
08_02_1633 + 28392378-28393445 29 1.4
09_04_0445 - 17677126-17677512,17677608-17678564 29 2.5
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 3.3
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 28 4.4
11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756... 27 5.8
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 27 7.6
07_03_0686 + 20697493-20697927 27 7.6
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 7.6
04_03_0868 - 20420298-20420915 27 7.6
02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165... 27 7.6
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 23 7.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 270 bits (662), Expect = 4e-73
Identities = 123/155 (79%), Positives = 137/155 (88%)
Frame = +2
Query: 5 EVPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
++P DKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+
Sbjct: 35 QMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLIS 94
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+
Sbjct: 95 GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVL 189
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 270 bits (661), Expect = 5e-73
Identities = 122/155 (78%), Positives = 137/155 (88%)
Frame = +2
Query: 5 EVPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
++P+D+T+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI
Sbjct: 35 QMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLIN 94
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+
Sbjct: 95 GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL 154
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVL 189
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 260 bits (638), Expect = 3e-70
Identities = 118/154 (76%), Positives = 134/154 (87%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+P+D T+G D+FNTFFSETGAGKHVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+G
Sbjct: 36 MPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISG 95
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVL 189
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 220 bits (537), Expect = 5e-58
Identities = 109/173 (63%), Positives = 128/173 (73%), Gaps = 21/173 (12%)
Frame = +2
Query: 14 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 193
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 194 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 373
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+ERL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 217
Query: 374 SVDYGKKSKLEFAIYPAPQ---------------------VSTAVVEPYNSIL 469
SVDYG+KSKL F IYP+PQ +STAVVEPYNS+L
Sbjct: 218 SVDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVL 270
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 144 bits (349), Expect = 3e-35
Identities = 65/156 (41%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Frame = +2
Query: 11 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 181
PT + +G D + N +++E G+ VPRAV +DLEP +D VRTG Y Q+F P+ +
Sbjct: 32 PTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFV 91
Query: 182 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 361
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Query: 362 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 142 bits (345), Expect = 1e-34
Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Frame = +2
Query: 11 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 181
PT + G D + N +++E G+ VPRAV +DLEP +D VRTG Y Q+F P+ +
Sbjct: 212 PTGRYAGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFV 271
Query: 182 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 361
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL
Sbjct: 272 FGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 331
Query: 362 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 332 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 367
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 141 bits (341), Expect = 3e-34
Identities = 64/155 (41%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Frame = +2
Query: 14 TDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
T K G D + N +++E G++VPRAV +DLEP +D VR+G Y Q+F P+ +
Sbjct: 33 TGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVF 92
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 139 bits (336), Expect = 1e-33
Identities = 59/143 (41%), Positives = 91/143 (63%)
Frame = +2
Query: 41 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 220
+ N +++E G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 45 ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104
Query: 221 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 400
HYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 401 LEFAIYPAPQVSTAVVEPYNSIL 469
L F+++P+P+VS VVEPYN+ L
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATL 187
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 138 bits (334), Expect = 2e-33
Identities = 63/155 (40%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Frame = +2
Query: 14 TDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
T K G D + N +++E G+ VPRAV +DLEP +D VR+G + Q+F P+ +
Sbjct: 33 TGKYSGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 137 bits (332), Expect = 4e-33
Identities = 59/140 (42%), Positives = 88/140 (62%)
Frame = +2
Query: 50 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 229
N +++E G+ VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 230 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 409
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F
Sbjct: 108 EGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTF 167
Query: 410 AIYPAPQVSTAVVEPYNSIL 469
+++P+P+VS VVEPYN+ L
Sbjct: 168 SVFPSPKVSDTVVEPYNATL 187
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 123 bits (296), Expect = 8e-29
Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 24/177 (13%)
Frame = +2
Query: 11 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 181
PT + G D + N +++E G+ VPRAV +DLEP +D VRTG Y Q+F P+ +
Sbjct: 32 PTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFV 91
Query: 182 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ-------------------- 301
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQ
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMM 151
Query: 302 -GFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
GF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 152 HGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 208
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 120 bits (290), Expect = 4e-28
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Frame = +2
Query: 41 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 220
+ N +F+E G+HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+G
Sbjct: 45 ERINVYFNEASGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKG 104
Query: 221 HYTIGKEIVDLVLDRIRKLADQCTGLQ----------------GFLIFHXXXXXXXXXXX 352
HYT G E++D VLD +RK A+ C LQ GF + H
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMG 164
Query: 353 XLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L
Sbjct: 165 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 203
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 93.9 bits (223), Expect = 6e-20
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Frame = +2
Query: 35 GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANN 208
G D + FF + ++PRA+ VDLEP V++ ++ YR L++ E + + A NN
Sbjct: 44 GGDRKDVFFYQADDQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNN 103
Query: 209 YARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 388
+A G++ G+++VD ++D I + AD L+GF++ H L+E L+ Y
Sbjct: 104 WASGYHQ-GEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYS 162
Query: 389 KKSKLEFAIYP-APQVSTAVVEPYNSIL 469
KK ++++P + S VV+PYNS+L
Sbjct: 163 KKLVQTYSVFPNQMETSDVVVQPYNSLL 190
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 373 ESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQ 251
E LH + E E VE+EE +E +V E + +E++
Sbjct: 56 EQLHSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEE 96
>09_01_0060 -
942762-943448,943840-943867,944044-944077,944383-944437
Length = 267
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -1
Query: 338 RCHHRTSGR*GIPGGLCIGQRVCGCGRGPSLRFPFQ--WCSDHEHSCLRHP 192
RCH RT R G G GQRV G G R W +D HP
Sbjct: 87 RCHRRTRWRAGGEGSSGGGQRVSSFGSGGRQRASSSVVWVADQSAPIADHP 137
>08_02_1633 + 28392378-28393445
Length = 355
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 266 CGRGPSLRFPFQWCSDHEHSCLRHPPY 186
C P L P W + +H C HPP+
Sbjct: 261 CPNHPPLTTPRSWDAHDDHDCPNHPPH 287
>09_04_0445 - 17677126-17677512,17677608-17678564
Length = 447
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 142 WHIQTVVSSRTTYHW*GGCRKQLCSWSLHHWKGNRRLGPRP 264
WH + + ++H GCR + W+L H G RLG P
Sbjct: 157 WHGISALIPFASWHARSGCRARPARWALFH-HGEVRLGMSP 196
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 72 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 203
E A++ P+P+S L+P A A +C + N+S R P+
Sbjct: 2 EAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISCARAAPR 45
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 301 LEACALVSEFADAVEDQVYDFLS 233
+ A AL+ E D VED + DFLS
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLS 125
>11_06_0371 +
22774245-22774413,22774504-22774670,22775538-22775631,
22775723-22775871,22775950-22776042,22776167-22776235,
22776236-22776415,22776465-22776518,22776739-22776905,
22777180-22777314,22777386-22777479,22777567-22777848
Length = 550
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = -2
Query: 271 ADAVEDQVYDFLSNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDG 95
A+ + +Q+Y F + V T +V C ++ K +++K +V LVN++ ++ + G
Sbjct: 223 AELLYEQLYFF--SLVHFTKVVYCHFQVSGSKFYYLKNEAVLLEMALVNWAITEVSKKG 279
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +1
Query: 256 PRPHPQTR*PMHRPPGIPHLPLVRWWHRFWFHFSPHGATLR 378
P P P P PP P P R HR W F+PHG R
Sbjct: 330 PSPSPPFPSPPSPPPP-PTSPSPRQ-HRGWAIFAPHGGHAR 368
>07_03_0686 + 20697493-20697927
Length = 144
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 89 PRAVFVDLEPTVV-DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 244
P+ F LEP+V+ DE T + + E L++GKE+ + + +G+E+
Sbjct: 5 PKDDFDFLEPSVLLDETHYQTGFKNGYSEGLVSGKEEGRQVGLKNGFQVGEEL 57
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 256 PRPHPQTR*PMHRPPGIPHLP 318
PRPHP R H PP P P
Sbjct: 129 PRPHPDIRILAHAPPPAPPPP 149
>04_03_0868 - 20420298-20420915
Length = 205
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +1
Query: 223 LHHWKG--NRRLGPRPHPQTR*PMHRPP 300
LH +K +RLGPRP Q+R P H P
Sbjct: 10 LHCYKAPEEQRLGPRPATQSRPPPHLLP 37
>02_01_0251 -
1652356-1652522,1652564-1652608,1652658-1652733,
1652976-1653041,1653120-1653238,1653334-1653508,
1653604-1653881,1654253-1654436,1654455-1654550,
1654872-1655012,1655091-1655123
Length = 459
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 325 ERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVTTS 212
E + +EE+ A + SE +DAVE+ Y VV+ S
Sbjct: 154 EYIHEEENQSAVPITSEESDAVENYTYSEPPQQVVSQS 191
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 23.4 bits (48), Expect(2) = 7.9
Identities = 9/63 (14%), Positives = 28/63 (44%)
Frame = -2
Query: 202 CGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVEGVVSTPDG 23
CG L++D +F L +C S +++ D + ++ + +++ + +
Sbjct: 1035 CGNTLSTDSVFSSGALRICMSGVSSSHASGSSSLDDESSSISQTSYISSKIQAAIDILNS 1094
Query: 22 LVS 14
+++
Sbjct: 1095 IIN 1097
Score = 21.8 bits (44), Expect(2) = 7.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 244 DFLSNGVVTTSIVVCGILLTSD 179
D L GV+ +S + G+LL D
Sbjct: 979 DNLITGVIQSSFAIFGLLLRQD 1000
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,765,981
Number of Sequences: 37544
Number of extensions: 340509
Number of successful extensions: 1170
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -