Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J14
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 273 5e-74
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 273 5e-74
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 273 5e-74
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 273 5e-74
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 248 1e-66
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 248 1e-66
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 248 2e-66
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 247 3e-66
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 245 1e-65
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 244 2e-65
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 242 8e-65
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 242 8e-65
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 234 3e-62
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 227 2e-60
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 227 2e-60
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 221 2e-58
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 138 1e-33
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 136 6e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 136 7e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 135 2e-32
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 135 2e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 135 2e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 118 3e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 118 3e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 72 2e-13
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 72 2e-13
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine r... 29 2.2
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 3.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 3.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 3.9
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 5.1
U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical pr... 27 5.1
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 27 5.1
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 6.8
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 6.8
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 6.8
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 27 9.0
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 27 9.0
AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical ... 27 9.0
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 27 9.0
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 273 bits (669), Expect = 5e-74
Identities = 123/155 (79%), Positives = 138/155 (89%)
Frame = +2
Query: 5 EVPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
++P+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT
Sbjct: 35 QMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLIT 94
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
GKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLM
Sbjct: 95 GKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLM 154
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
ERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 155 ERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSIL 189
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 273 bits (669), Expect = 5e-74
Identities = 123/155 (79%), Positives = 138/155 (89%)
Frame = +2
Query: 5 EVPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
++P+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT
Sbjct: 34 QMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLIT 93
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
GKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLM
Sbjct: 94 GKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLM 153
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
ERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 154 ERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSIL 188
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 273 bits (669), Expect = 5e-74
Identities = 123/155 (79%), Positives = 138/155 (89%)
Frame = +2
Query: 5 EVPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
++P+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT
Sbjct: 35 QMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLIT 94
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
GKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLM
Sbjct: 95 GKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLM 154
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
ERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 155 ERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSIL 189
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 273 bits (669), Expect = 5e-74
Identities = 123/155 (79%), Positives = 138/155 (89%)
Frame = +2
Query: 5 EVPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLIT 184
++P+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLIT
Sbjct: 35 QMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLIT 94
Query: 185 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 364
GKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLM
Sbjct: 95 GKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLM 154
Query: 365 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
ERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 155 ERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSIL 189
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 248 bits (608), Expect = 1e-66
Identities = 113/154 (73%), Positives = 132/154 (85%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+PT T G +SF TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITG
Sbjct: 36 MPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITG 93
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 187
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 248 bits (608), Expect = 1e-66
Identities = 113/154 (73%), Positives = 132/154 (85%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+PT T G +SF TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITG
Sbjct: 36 MPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITG 93
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 187
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 248 bits (607), Expect = 2e-66
Identities = 111/151 (73%), Positives = 128/151 (84%)
Frame = +2
Query: 17 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 196
+ ++G DDSFNTFFSET AGKHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKED
Sbjct: 44 EDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKED 103
Query: 197 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 376
AANNYARGHYTIGKEI+D+V+DR+R+L + C GLQGFL+FH LLMERLS
Sbjct: 104 AANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLS 163
Query: 377 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
VDYGKKSKLEF IYPAPQVST++VEPYNSIL
Sbjct: 164 VDYGKKSKLEFCIYPAPQVSTSMVEPYNSIL 194
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 247 bits (605), Expect = 3e-66
Identities = 112/154 (72%), Positives = 132/154 (85%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+P+D+ G +SF TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITG
Sbjct: 36 MPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITG 93
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 187
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 245 bits (600), Expect = 1e-65
Identities = 111/154 (72%), Positives = 131/154 (85%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+P+D+ G +SF TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITG
Sbjct: 36 MPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITG 93
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLSVDYGKKSKLEF+IYPAPQV TAVVEPYNSIL
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSIL 187
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 244 bits (598), Expect = 2e-65
Identities = 107/154 (69%), Positives = 131/154 (85%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+P D + G D S+NTFFSET +GKHVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+G
Sbjct: 36 MPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISG 95
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANNYARGHYTIGKE++D+V+DR+R+L ++C LQGFLIFH L+ME
Sbjct: 96 KEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVME 155
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLS+DYGKK+KLEF+IYPAPQ+ST++VEPYNS+L
Sbjct: 156 RLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLL 189
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 242 bits (593), Expect = 8e-65
Identities = 110/154 (71%), Positives = 130/154 (84%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+P+++ GG SF TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITG
Sbjct: 36 MPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITG 93
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 187
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 242 bits (593), Expect = 8e-65
Identities = 110/154 (71%), Positives = 130/154 (84%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 187
+P+++ GG SF TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITG
Sbjct: 36 MPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITG 93
Query: 188 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 367
KEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 368 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
RLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSIL
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 187
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 234 bits (572), Expect = 3e-62
Identities = 102/146 (69%), Positives = 121/146 (82%)
Frame = +2
Query: 32 GGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 211
G S TFFS+TG G+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNY
Sbjct: 41 GNSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNY 100
Query: 212 ARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 391
ARGHYT+GKEI+D LDRIR+LA+ C GLQGF +FH +LMERLS +YGK
Sbjct: 101 ARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGK 160
Query: 392 KSKLEFAIYPAPQVSTAVVEPYNSIL 469
KSKLEF+IYPAPQ+ST+VVEPYNSIL
Sbjct: 161 KSKLEFSIYPAPQISTSVVEPYNSIL 186
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 227 bits (556), Expect = 2e-60
Identities = 103/151 (68%), Positives = 122/151 (80%)
Frame = +2
Query: 17 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 196
D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKED
Sbjct: 45 DDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKED 104
Query: 197 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 376
AAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS
Sbjct: 105 AANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLS 164
Query: 377 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
+YGKK KLEFAIYPAPQVST++VEPYNSIL
Sbjct: 165 TEYGKKPKLEFAIYPAPQVSTSMVEPYNSIL 195
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 227 bits (556), Expect = 2e-60
Identities = 103/151 (68%), Positives = 122/151 (80%)
Frame = +2
Query: 17 DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED 196
D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKED
Sbjct: 17 DDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKED 76
Query: 197 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 376
AAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS
Sbjct: 77 AANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLS 136
Query: 377 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
+YGKK KLEFAIYPAPQVST++VEPYNSIL
Sbjct: 137 TEYGKKPKLEFAIYPAPQVSTSMVEPYNSIL 167
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 221 bits (541), Expect = 2e-58
Identities = 99/142 (69%), Positives = 116/142 (81%)
Frame = +2
Query: 44 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 223
S FFSE+ GKHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGH
Sbjct: 51 SLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGH 110
Query: 224 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 403
YTIGKE++D+VLDRIRK + C GLQGFL+FH LLMERLSV++GKKSKL
Sbjct: 111 YTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKL 170
Query: 404 EFAIYPAPQVSTAVVEPYNSIL 469
EF++YPAPQVST+VVEPYNSIL
Sbjct: 171 EFSVYPAPQVSTSVVEPYNSIL 192
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 138 bits (335), Expect = 1e-33
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Frame = +2
Query: 2 HEVPTDKTIGGGDD----SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 169
H + D T G D N +++E GK+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 28 HGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 170 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 349
+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF + H
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGM 147
Query: 350 XXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
LL+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 148 GTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 136 bits (330), Expect = 6e-33
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Frame = +2
Query: 11 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 181
PT G D + N +++E GK+VPRA VDLEP +D VR G + QLF P+ +
Sbjct: 32 PTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFV 91
Query: 182 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 361
G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF + H LL
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLL 151
Query: 362 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
+ ++ +Y + + F++ P+P+VS VVEPYN+ L
Sbjct: 152 ISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATL 187
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 136 bits (329), Expect = 7e-33
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Frame = +2
Query: 2 HEVPTDKTIGGGDD----SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 169
H + D T G D + +++E GK+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 28 HGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 170 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 349
+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQGF + H
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGM 147
Query: 350 XXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
LL+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 148 GTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 135 bits (326), Expect = 2e-32
Identities = 66/160 (41%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Frame = +2
Query: 2 HEVPTDKTIGGGDD----SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 169
H + D T G D + +++E GK+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 28 HGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 170 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 349
+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQGF + H
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGM 147
Query: 350 XXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
LL+ ++ ++ + F++ P+P+VS VVEPYN+ L
Sbjct: 148 GTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 135 bits (326), Expect = 2e-32
Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Frame = +2
Query: 11 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 181
P+ + +G D + N +++E G+ K+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 32 PSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
Query: 182 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 361
G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF + H LL
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLL 151
Query: 362 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 135 bits (326), Expect = 2e-32
Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Frame = +2
Query: 11 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 181
P+ + +G D + N +++E G+ K+VPRAV VDLEP +D VR+G + QLF P+ +
Sbjct: 32 PSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYV 91
Query: 182 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 361
G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF + H LL
Sbjct: 92 FGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLL 151
Query: 362 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (283), Expect = 3e-27
Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 4/160 (2%)
Frame = +2
Query: 2 HEVPTDKTIGGGDDS----FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 169
H + TD T G + S +++ E K+VPRA+ VDL+P ++ VR+ Y +LF P
Sbjct: 28 HGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 170 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 349
E ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+GF + H
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGL 147
Query: 350 XXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
LL+ +L +Y K+ +I P+ +VS VVEPYN+IL
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAIL 187
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (283), Expect = 3e-27
Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 4/160 (2%)
Frame = +2
Query: 2 HEVPTDKTIGGGDDS----FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 169
H + TD T G + S +++ E K+VPRA+ VDL+P ++ VR+ Y +LF P
Sbjct: 28 HGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 170 EQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 349
E ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+GF + H
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGL 147
Query: 350 XXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 469
LL+ +L +Y K+ +I P+ +VS VVEPYN+IL
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAIL 187
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 72.1 bits (169), Expect = 2e-13
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Frame = +2
Query: 38 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANN 208
+D + F + +VPRAV VDLEP V++ +++ + LF+ + + A NN
Sbjct: 46 NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNN 105
Query: 209 YARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 388
+A G Y G+E+ + ++D I + A+ L G L H LL+ERL +
Sbjct: 106 WASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFP 164
Query: 389 KKSKLEFAIYPAPQVST-AVVEPYNSIL 469
KK ++++ ST VV PYN +L
Sbjct: 165 KKVIQTYSVFANSDTSTDVVVHPYNWVL 192
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 72.1 bits (169), Expect = 2e-13
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Frame = +2
Query: 38 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANN 208
+D + F + +VPRAV VDLEP V++ +++ + LF+ + + A NN
Sbjct: 46 NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNN 105
Query: 209 YARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 388
+A G Y G+E+ + ++D I + A+ L G L H LL+ERL +
Sbjct: 106 WASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFP 164
Query: 389 KKSKLEFAIYPAPQVST-AVVEPYNSIL 469
KK ++++ ST VV PYN +L
Sbjct: 165 KKVIQTYSVFANSDTSTDVVVHPYNWVL 192
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = -2
Query: 403 QFRLLAVVNGESL---HEERSETR-TGATTERVEDEESLEACALV-SEFADAVEDQV 248
+F +L V+ G+ H +++E + T T+ VE S AC L +E+ADA++D++
Sbjct: 108 KFEVLGVLEGKDQAVEHPKKTENKETENETDNVETPNS-SACILSDNEYADAIDDEI 163
>AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine
receptor, class x protein24 protein.
Length = 287
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -2
Query: 235 SNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGF 113
S G++T ++ VC I++ LF++ + + S+ LV+ S F
Sbjct: 38 SFGIITKNLAVCNIVMCGLGLFFLFPMQLAPSSVLVDNSHF 78
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 122 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 265
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = -2
Query: 421 GIDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYD 242
G+D E QF + N S+H++ T ++EA L F + +
Sbjct: 639 GLDKETQFEMCTEYNSPSIHDKEILTNANVGEVLPVPVNAMEAHNLTGMFDKVIASMTFQ 698
Query: 241 FLSNGVVTTSIVVCGILLTSDKLFW 167
L N VV + G + K+F+
Sbjct: 699 EL-NDVVPAHTSI-GFSVAHRKIFF 721
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 27 SGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT 206
SG+ TPS SSA + +T P +S P L ++ + N + +P
Sbjct: 944 SGLSQTPSDSSSASDSMRTTTVDPDASTETPYDFVLENLTWNETVYYSENPFYITPIPNK 1003
Query: 207 TMLVVTTPL 233
+TT +
Sbjct: 1004 EPGALTTAM 1012
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 27 SGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT 206
SG+ TPS SSA + +T P +S P L ++ + N + +P
Sbjct: 944 SGLSQTPSDSSSASDSMRTTTVDPDASTETPYDFVLENLTWNETVYYSENPFYITPIPNK 1003
Query: 207 TMLVVTTPL 233
+TT +
Sbjct: 1004 EPGALTTAM 1012
>U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical
protein T05A7.3 protein.
Length = 155
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +3
Query: 18 TRPSGVETTP--STRSSARPELASTFPVPSSSI--LNPL*LTRSALAHTDSCFIQNNLSL 185
T PSG +T + P STFP+PS + L L R + +D QN+ L
Sbjct: 46 TNPSGCNSTALFDAGTITSPNYPSTFPIPSYCVYKLTTLGAYRIGIYFSDLSMSQNSYVL 105
Query: 186 V 188
V
Sbjct: 106 V 106
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 3 TRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDS 158
T T P + T + +PE+A+T P PS++ PL +A TD+
Sbjct: 177 TEAIATTPRAIPPAVVTTEATQPEVATTLPEPSTT-SEPLTSAPRMVATTDA 227
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 53 TFFSETGAGKHVPRAVFVDLEPTVVD 130
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 53 TFFSETGAGKHVPRAVFVDLEPTVVD 130
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 53 TFFSETGAGKHVPRAVFVDLEPTVVD 130
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 8 VPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 115
+P + +GGG +F+ + +HV + F D E
Sbjct: 38 IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 26.6 bits (56), Expect = 9.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 328 WWHRFWFHFSPHGA 369
WW FWF+F +GA
Sbjct: 146 WWMTFWFNFLYYGA 159
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 6 RCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNP 119
RC L RP G T P+ A+ S+ P S L+P
Sbjct: 718 RCGLCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHP 755
>AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical
protein Y23H5B.4 protein.
Length = 407
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 256 DQVYDFLSNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLA 77
+ V+D LS + V+C ++ + +++ VC N+SG I++ ++L+
Sbjct: 313 NNVFDLLSLINSAVNFVLCALMSHVFRREFLQTFGVCCPQSSENHSGAPINKTSNRSILS 372
Query: 76 S-SGLAEER 53
+ S +A+ +
Sbjct: 373 TFSNIAKPK 381
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 6 RCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNP 119
RC L RP G T P+ A+ S+ P S L+P
Sbjct: 718 RCGLCRPCGEVTEPAQPGRAQHVQFSSTAAPQRSTLHP 755
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,630,863
Number of Sequences: 27780
Number of extensions: 255459
Number of successful extensions: 861
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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