Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J14
         (470 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.54 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.0  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   8.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 220 SLHHWKGNRRLGPRPHPQTR*PMHRPPGIPHL 315
           S HH  GN  +GP   P      H+   + HL
Sbjct: 333 SPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHL 364


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 382 VNGESLHEERSETRTGATTERVEDE 308
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 382 VNGESLHEERSETRTGATTERVEDE 308
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 382 VNGESLHEERSETRTGATTERVEDE 308
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 65  ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 160
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 406 VRYLSRTPGVHCCCRALQLYP 468
           V+Y +R   +  C    QLYP
Sbjct: 104 VKYSARMHAIIACQMEFQLYP 124


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
          protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 96 ARGTCLPAPVSLKNVL 49
          A GTC   P  L+N++
Sbjct: 6  ATGTCQKKPTKLRNLI 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,206
Number of Sequences: 438
Number of extensions: 3684
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)