Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J13
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 82 1e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 5e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 54 5e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 54 5e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 5e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 5e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 54 5e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 52 2e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 52 2e-07
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 51 3e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.002
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.002
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 38 0.003
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 38 0.003
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 38 0.003
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 33 0.058
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 33 0.10
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 32 0.13
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 32 0.13
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 32 0.18
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 32 0.18
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.18
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 32 0.18
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 32 0.18
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 31 0.23
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 0.54
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 0.54
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 0.71
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 29 0.94
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 29 1.2
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 1.2
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 29 1.7
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 28 2.2
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 2.9
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 27 3.8
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 27 3.8
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 27 6.7
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 6.7
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 6.7
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 27 6.7
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 27 6.7
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 27 6.7
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 27 6.7
Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical pr... 26 8.8
Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical p... 26 8.8
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 82.2 bits (194), Expect = 1e-16
Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Frame = +2
Query: 143 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE--------- 295
S CY C TGHF+R+C +GG G G C+ C GH++RDC
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGY 94
Query: 296 -----------ADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHI 400
+CY C +GHI+REC + S +E CY C +TGHI
Sbjct: 95 GGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHI 142
Score = 69.7 bits (163), Expect = 7e-13
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ-------GGVGARDA-GFNRQREKCFKCNRTGHFARDCKE---- 292
CY C GH++R+C GG G R G + +KC+ C R+GH +R+C E
Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSA 128
Query: 293 EADRCYRCNGTGHIAREC 346
E RCY+C TGHI+R+C
Sbjct: 129 EEKRCYQCQETGHISRDC 146
Score = 64.9 bits (151), Expect = 2e-11
Identities = 39/120 (32%), Positives = 49/120 (40%), Gaps = 31/120 (25%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQG-GVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD--- 301
MS CYKC + GH +R C G G R G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGGGG--GSTCYNCQETGHFSRDCPKGGSGGG 58
Query: 302 ---------RCYRCNGTGHIARECAQSPDE------------------PSCYNCNKTGHI 400
CY C G GH +R+C + E CYNC ++GHI
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHI 118
Score = 53.2 bits (122), Expect = 7e-08
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD 301
CY C R+GH +RECT+ G + + ++C++C TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 5e-08
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
+C+ C G GH + EC + P C+NC + GH
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGH 272
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G G + CF C + GH + DC KE R CY C GH +REC +
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.1 bits (77), Expect = 0.019
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +R+C EE
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEE 201
Score = 33.9 bits (74), Expect = 0.044
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
E + C+ C GH + +C + E CYNC + GH
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGH 193
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/80 (23%), Positives = 26/80 (32%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 328
C+ C GH + EC + G CF C GH + +C A G G
Sbjct: 244 CFNCKGEGHRSAECPEPPRG------------CFNCGEQGHRSNECPNPAKPREGVEGEG 291
Query: 329 HIARECAQSPDEPSCYNCNK 388
A + +N K
Sbjct: 292 PKATYVPVEDNMEDVFNMQK 311
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 53.6 bits (123), Expect = 5e-08
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQG-----GVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGH 397
C G GH + EC + P C+NC + GH
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGH 483
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 414
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
+G +D E + C+ C GH + +C + E CYNC + GH
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGH 292
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
+G +D E + C+ C GH + +C + E CYNC + GH
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGH 406
Score = 28.3 bits (60), Expect = 2.2
Identities = 19/80 (23%), Positives = 26/80 (32%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 328
C+ C GH + EC + G CF C GH + +C A G G
Sbjct: 455 CFNCKGEGHRSAECPEPPRG------------CFNCGEQGHRSNECPNPAKPREGAEGEG 502
Query: 329 HIARECAQSPDEPSCYNCNK 388
A + +N K
Sbjct: 503 PKATYVPVEDNMEEVFNMQK 522
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ 196
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 53.6 bits (123), Expect = 5e-08
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQG-----GVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGH 397
C G GH + EC + P C+NC + GH
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGH 483
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 414
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
+G +D E + C+ C GH + +C + E CYNC + GH
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGH 292
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
+G +D E + C+ C GH + +C + E CYNC + GH
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGH 406
Score = 28.3 bits (60), Expect = 2.2
Identities = 19/80 (23%), Positives = 26/80 (32%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 328
C+ C GH + EC + G CF C GH + +C A G G
Sbjct: 455 CFNCKGEGHRSAECPEPPRG------------CFNCGEQGHRSNECPNPAKPREGAEGEG 502
Query: 329 HIARECAQSPDEPSCYNCNK 388
A + +N K
Sbjct: 503 PKATYVPVEDNMEEVFNMQK 522
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ 196
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 5e-08
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
+C+ C G GH + EC + P C+NC + GH
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGH 272
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G G + CF C + GH + DC KE R CY C GH +REC +
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.1 bits (77), Expect = 0.019
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +R+C EE
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEE 201
Score = 33.9 bits (74), Expect = 0.044
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
E + C+ C GH + +C + E CYNC + GH
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGH 193
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/80 (23%), Positives = 26/80 (32%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 328
C+ C GH + EC + G CF C GH + +C A G G
Sbjct: 244 CFNCKGEGHRSAECPEPPRG------------CFNCGEQGHRSNECPNPAKPREGVEGEG 291
Query: 329 HIARECAQSPDEPSCYNCNK 388
A + +N K
Sbjct: 292 PKATYVPVEDNMEDVFNMQK 311
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 53.6 bits (123), Expect = 5e-08
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 295
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
+C+ C G GH + EC + P C+NC + GH
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGH 272
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G G + CF C + GH + DC KE R CY C GH +REC +
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.1 bits (77), Expect = 0.019
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +R+C EE
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEE 201
Score = 33.9 bits (74), Expect = 0.044
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
E + C+ C GH + +C + E CYNC + GH
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGH 193
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/80 (23%), Positives = 26/80 (32%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 328
C+ C GH + EC + G CF C GH + +C A G G
Sbjct: 244 CFNCKGEGHRSAECPEPPRG------------CFNCGEQGHRSNECPNPAKPREGVEGEG 291
Query: 329 HIARECAQSPDEPSCYNCNK 388
A + +N K
Sbjct: 292 PKATYVPVEDNMEDVFNMQK 311
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 53.6 bits (123), Expect = 5e-08
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQG-----GVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 310
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 311 RCNGTGHIARECAQSPDEPSCYNCNKTGH 397
C G GH + EC + P C+NC + GH
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGH 483
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 200 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 352
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 414
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
+G +D E + C+ C GH + +C + E CYNC + GH
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGH 292
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 263 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGH 397
+G +D E + C+ C GH + +C + E CYNC + GH
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGH 406
Score = 28.3 bits (60), Expect = 2.2
Identities = 19/80 (23%), Positives = 26/80 (32%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 328
C+ C GH + EC + G CF C GH + +C A G G
Sbjct: 455 CFNCKGEGHRSAECPEPPRG------------CFNCGEQGHRSNECPNPAKPREGAEGEG 502
Query: 329 HIARECAQSPDEPSCYNCNK 388
A + +N K
Sbjct: 503 PKATYVPVEDNMEEVFNMQK 522
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 146 VCYKCNRTGHFARECTQ 196
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 319
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 320 GTGHIARECAQSPDEP--SCYNCNKTGH 397
GH A +C Q P P C NC + GH
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGH 649
Score = 47.6 bits (108), Expect = 3e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR------CY 310
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 311 RCNGTGHIARECAQSPDE 364
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 34.7 bits (76), Expect = 0.025
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGH 397
N+ G++ D E C+ C GHI++EC P P C NC + GH
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGH 603
Score = 32.7 bits (71), Expect = 0.10
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 286
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 319
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 320 GTGHIARECAQSPDEP--SCYNCNKTGH 397
GH A +C Q P P C NC + GH
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGH 649
Score = 47.6 bits (108), Expect = 3e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR------CY 310
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 311 RCNGTGHIARECAQSPDE 364
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 34.7 bits (76), Expect = 0.025
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGH 397
N+ G++ D E C+ C GHI++EC P P C NC + GH
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGH 603
Score = 32.7 bits (71), Expect = 0.10
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 286
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 51.2 bits (117), Expect = 3e-07
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR-- 304
K++ S C+ C GH +C + + D CFKC H +CK++ +
Sbjct: 225 KITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGF 277
Query: 305 ----CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHI 400
C+ C GHI+R+C Q+ PD C C H+
Sbjct: 278 PYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHL 318
Score = 48.0 bits (109), Expect = 3e-06
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +2
Query: 128 SKMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRC 307
S S VC+KC H EC + GV GF CF C + GH +RDC + +
Sbjct: 249 SSSSDGVCFKCGSMEHSIHECKKKGV----KGF--PYATCFVCKQVGHISRDCHQNVNGV 302
Query: 308 YR----CNGTG---HIARECAQ 352
Y CN G H+ R+C +
Sbjct: 303 YPDGGCCNVCGANTHLRRDCPE 324
Score = 28.7 bits (61), Expect = 1.7
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +2
Query: 197 GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 367
G V DA +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 368 SCYNCNKTGH 397
C+ C H
Sbjct: 255 VCFKCGSMEH 264
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 349
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 29.5 bits (63), Expect = 0.94
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
++ C+ C GH A EC S + C NC H
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNH 232
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 268
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 349
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 29.5 bits (63), Expect = 0.94
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 296 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
++ C+ C GH A EC S + C NC H
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNH 232
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 268
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 239 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 370
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 654 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 658 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 693
Score = 29.9 bits (64), Expect = 0.71
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 400
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHI
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHI 686
Score = 27.9 bits (59), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 671 KLKNRACFRCNEMGHIAWNC 690
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 239 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 370
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 557 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 561 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 596
Score = 29.9 bits (64), Expect = 0.71
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 400
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHI
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHI 589
Score = 27.9 bits (59), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 574 KLKNRACFRCNEMGHIAWNC 593
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 239 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 370
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 568 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 295
EC Q G F + CF+CN GH A +C ++
Sbjct: 572 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 607
Score = 29.9 bits (64), Expect = 0.71
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +2
Query: 239 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 400
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHI
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHI 600
Score = 27.9 bits (59), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 131 KMSSSVCYKCNRTGHFAREC 190
K+ + C++CN GH A C
Sbjct: 585 KLKNRACFRCNEMGHIAWNC 604
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 33.5 bits (73), Expect = 0.058
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = +2
Query: 182 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 361
R C Q +G GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 362 E----PSCYNCNKTGH 397
P C C H
Sbjct: 882 GFWGFPECRTCQCNDH 897
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +2
Query: 143 SVCYKCNRTGHFARECTQGGVGARDAGFNRQRE--KCFKCNRTGHFARDCKEEADRCYRC 316
S C C+ T H R +A + RE CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 317 NGTGH 331
G H
Sbjct: 371 KGNHH 375
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.13
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVG--ARDAGFNRQREKCFKCNRTGHFARDCKEEADR 304
C++C+R GHF C Q + AR + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 182 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEA 298
R+C QG A +RQ C +C+R GHF C + A
Sbjct: 1344 RKCNQGS-----APTDRQ---CHQCHRIGHFVESCPQRA 1374
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQG-GVGARDAG 223
MS CYKC + GH +R C G G R G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGG 31
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 334
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 296 ADR-CYRCNGTGHIAREC 346
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 93 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.18
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 134 MSSSVCYKCNRTGHFARECTQGGV 205
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 343
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +2
Query: 194 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 352
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 31.5 bits (68), Expect = 0.23
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 305 CYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
CY+C GH++++C QS N KT H
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEH 342
Score = 27.9 bits (59), Expect = 2.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGA 211
CYKC GH +++C Q +
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNS 333
Score = 26.6 bits (56), Expect = 6.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 245 CFKCNRTGHFARDCKEEA 298
C+KC GH ++DC + +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.3 bits (65), Expect = 0.54
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHI 400
G F + RC C H + EC +P ++ C NC GHI
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHI 464
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 289
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 242 KCFKCNRTGHFARDCKEEAD-----RCYRCNGTGHIAREC 346
+C C H + +C + + +C C GHI+++C
Sbjct: 429 RCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.3 bits (65), Expect = 0.54
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHI 400
G F + RC C H + EC +P ++ C NC GHI
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHI 464
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 289
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 242 KCFKCNRTGHFARDCKEEAD-----RCYRCNGTGHIAREC 346
+C C H + +C + + +C C GHI+++C
Sbjct: 429 RCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.9 bits (64), Expect = 0.71
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR 304
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 29.5 bits (63), Expect = 0.94
Identities = 22/93 (23%), Positives = 34/93 (36%)
Frame = -2
Query: 398 CARFCCSCSTTARRGSARTHALCAPCHYICSNGQPPPCSRAQSARCGCT*STSPAAG*SQ 219
C C SCS + + PC C++G CS + S C + +
Sbjct: 201 CLGSCNSCSGGGCNSNNSNLVVVTPCERSCNSGCRSTCS-STSTLSVCIPACQQTCRSTC 259
Query: 218 RRGRLRHLACTRGRSAPSCCTCSIRLNSFSIRC 120
+ + CT G S S C+CS + +C
Sbjct: 260 STAKTFVIPCTSGTSGNS-CSCSTGYSICGSQC 291
Score = 29.1 bits (62), Expect = 1.2
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = -2
Query: 401 RCARFCCSCSTTARRGSARTHALCAP-CHYIC-SNGQPPPCSRAQSARCG--CT*STSPA 234
R R CC S+++ S+ +++ C P C C S+ P C + S +C CT S + +
Sbjct: 29 RVRRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCT-SITIS 87
Query: 233 AG*SQRRGRLRHLACTRGRSAPSCC-TCSIRLNSFSIRCIT 114
+G S + AC+ + P+C TC + NS S C T
Sbjct: 88 SGPSCSSCQ---SACSSACTTPTCIRTC--QRNSCSNLCNT 123
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -2
Query: 401 RCARFC---CSCSTTARRGSARTHALCAPCHYICSNGQPPPCSRAQSARCGCT*STSP 237
+C + C C TTA + A A C+ C+ C Q+++CGC + SP
Sbjct: 263 QCQQQCQQQCQTRTTASQQCAP--ACSTSCNQSCNQPAQMACQPMQNSQCGCQQNYSP 318
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 397
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 230 RQREKCFKCNRTGHFARDCKEEA 298
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKC 256
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 28.7 bits (61), Expect = 1.7
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Frame = -2
Query: 380 SCSTTARRGSARTHALCAPCHYICSNG--QPPPCSRAQSARCGCT*STSPAAG*SQRRGR 207
+CS T G + T + C C+ G + PC Q A C CT P + +
Sbjct: 150 ACSVTCGSGGSITRSRQCSCGSGCTGGSVEQEPCP--QQAACPCTTCNQPPPPCNTCNTQ 207
Query: 206 ----LRHLACTRGRSAPSCCTC 153
+ CT P+C TC
Sbjct: 208 PVVIVTPAPCTTCYQPPACSTC 229
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -2
Query: 389 FC-CSCSTTARRGSARTHALCAPCHYICSNGQPPPCSRAQSARCGC 255
FC C+ S + S+ + C P + P C A+ +RCGC
Sbjct: 7 FCICTISDASAHTSSSRTSFCTPSTSHIVSPSFPICIAAKCSRCGC 52
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 325
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 326 GHIARECAQSPDEPS 370
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = -2
Query: 383 CSCSTTARRGSARTHALCAPCHYICSNGQPPPCSRAQSARC 261
C C + C P H NG P PC R A+C
Sbjct: 525 CDCGFSQADCDQMGDKCCVP-HEARGNGGPGPCKRKPGAQC 564
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = -2
Query: 383 CSCSTTARRGSARTHALCAPCHYICSNGQPPPCSRAQSARC 261
C C + C P H NG P PC R A+C
Sbjct: 525 CDCGFSQADCDQMGDKCCVP-HEARGNGGPGPCKRKPGAQC 564
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
RGRL L ++ + C C+ L FS RC+
Sbjct: 182 RGRLPVLTYFHQQTEAALCRCAQPLTGFSARCV 214
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
RGRL L ++ + C C+ L FS RC+
Sbjct: 290 RGRLPVLTYFHQQTEAALCRCAQPLTGFSARCV 322
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
RGRL L ++ + C C+ L FS RC+
Sbjct: 184 RGRLPVLTYFHQQTEAALCRCAQPLTGFSARCV 216
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCY 376
+ KC KC ++ + A + + C++CN + C +P E Y
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY 58
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC---KEEAD-RCYRC 316
C KC ++ + A E + GG + + CFKCN C EA+ C +C
Sbjct: 11 CPKCGKSVYAAEEMSAGGY--------KWHKFCFKCNMCNKLLDSCTVAPHEAELYCKQC 62
Query: 317 NG 322
+G
Sbjct: 63 HG 64
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 233 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCY 376
+ KC KC ++ + A + + C++CN + C +P E Y
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY 58
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC---KEEAD-RCYRC 316
C KC ++ + A E + GG + + CFKCN C EA+ C +C
Sbjct: 11 CPKCGKSVYAAEEMSAGGY--------KWHKFCFKCNMCNKLLDSCTVAPHEAELYCKQC 62
Query: 317 NG 322
+G
Sbjct: 63 HG 64
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 392 RFCCSCSTTARRGSARTHALCAPCH 318
RFCCS + G+ TH CAPCH
Sbjct: 3688 RFCCSIAVYFCFGT--TH-FCAPCH 3709
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 26.6 bits (56), Expect = 6.7
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Frame = +2
Query: 224 FNRQREKCFKCNRTGHFARD-----CKEEADRCYRCNGTGHIARECAQ----SPDEPSCY 376
FNR +C C T + D C + +R NG EC + SPD+ C
Sbjct: 11 FNRIELRCEICPNTTIPSDDMMSCKCSKNQIEIFR-NGFVPTCEECPEGTLSSPDQTGCL 69
Query: 377 NCN 385
NCN
Sbjct: 70 NCN 72
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
RGRL L ++ + C C+ L FS RC+
Sbjct: 290 RGRLPVLTYFHQQTEAALCRCAQPLTGFSARCV 322
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
RGRL L ++ + C C+ L FS RC+
Sbjct: 184 RGRLPVLTYFHQQTEAALCRCAQPLTGFSARCV 216
>Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 389 FCCSCSTTARRGSARTHALCAPCHYICSNGQPPPCSRAQSAR-CGCT*STSPAA 231
FC +TTA + + C ++CSN + P + A+ CG S S AA
Sbjct: 93 FCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKTCGFCGSGSTAA 146
>Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 389 FCCSCSTTARRGSARTHALCAPCHYICSNGQPPPCSRAQSAR-CGCT*STSPAA 231
FC +TTA + + C ++CSN + P + A+ CG S S AA
Sbjct: 93 FCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKTCGFCGSGSTAA 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,193,961
Number of Sequences: 27780
Number of extensions: 162221
Number of successful extensions: 831
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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