Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J12
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.39 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.39 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.89 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   1.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 363 GTDPEDVIKNAFGCFDEENTGLI 431
           G DPE ++ N  G F + NTG +
Sbjct: 306 GQDPESLLINGKGQFRDPNTGFM 328


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 363 GTDPEDVIKNAFGCFDEENTGLI 431
           G DPE ++ N  G F + NTG +
Sbjct: 306 GQDPESLLINGKGQFRDPNTGFM 328


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 416 FLIKTSKCIFDNIFRI 369
           F+I TS CI+ N+ RI
Sbjct: 178 FMIFTSTCIYTNLLRI 193


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 138 WKLLSGHVFCLC 103
           W +L GH+F +C
Sbjct: 157 WNILFGHIFTVC 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,909
Number of Sequences: 336
Number of extensions: 2503
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)