Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J12
(504 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 91 1e-19
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 85 6e-18
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 63 3e-11
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 59 3e-10
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 50 2e-07
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 36 0.003
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 30 0.23
SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr 1|... 28 0.92
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 28 0.92
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 27 1.2
SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr 1|||Ma... 27 2.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 2.8
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 25 4.9
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 25 6.5
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 6.5
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy... 25 8.5
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 25 8.5
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 90.6 bits (215), Expect = 1e-19
Identities = 49/143 (34%), Positives = 73/143 (51%)
Frame = +3
Query: 75 SSRKTAGRRGTNKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLA 254
SS T+ +R + A+RA+S FA +QI E KEAF ++D++ DG I ++D+ ML
Sbjct: 17 SSNTTSSQR-VAAQAAKRASSGAFAQLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLT 75
Query: 255 SLGKNPNEDYLEGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENTGLIG 434
SL ++ +ED + M PIN FLT G L P + + AF FD+ +G I
Sbjct: 76 SLNQDASEDSINHMFESINPPINLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIP 135
Query: 435 XXXXXXXXXXMGDRFTDDDVDEM 503
MGDR +V+ +
Sbjct: 136 ISTMRDALSSMGDRMDPQEVESI 158
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 183 EAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMM 299
EAF+ D + G I + D L+S+G + +E ++
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESIL 159
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 85.0 bits (201), Expect = 6e-18
Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Frame = +3
Query: 165 QIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNEAP----GPINFTM 332
QIAEF+EAF++ D+++DG I ++L ++ SLG++P L+ M+NE G I+FT
Sbjct: 10 QIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTE 69
Query: 333 FLTLFGERLQGTDPEDVIKNAFGCFDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEM 503
FLT+ +++ TD E+ ++ AF FD++ G I +G+R + ++V +M
Sbjct: 70 FLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADM 126
Score = 36.7 bits (81), Expect = 0.002
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 150 MFDQAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNEA----PGP 317
M D E +EAF + D++ +G+I ++L +L SLG+ +++ + M+ EA G
Sbjct: 78 MKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGV 137
Query: 318 INFTMF 335
IN+ F
Sbjct: 138 INYEEF 143
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 62.9 bits (146), Expect = 3e-11
Identities = 34/113 (30%), Positives = 57/113 (50%)
Frame = +3
Query: 165 QIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNEAPGPINFTMFLTL 344
Q E KEAF + D ++DG I + +L SLG N + L + NE I+ F++
Sbjct: 7 QTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELGDAIDEKKFMSF 66
Query: 345 FGERLQGTDPEDVIKNAFGCFDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEM 503
+L+ T+ E+ AF FD++N+G I +G++ +D++V M
Sbjct: 67 VSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLM 119
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 59.3 bits (137), Expect = 3e-10
Identities = 31/113 (27%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +3
Query: 177 FKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNEAPGPINFTMFLTLF--- 347
+K+AF++ D++ G I K + D+L + G+NP + + + P ++ FL +
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRP 67
Query: 348 -GERLQGTDPEDVIKNAFGCFDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEM 503
G + G DPE+ +K F FD++ TG+IG +G++ +++++DE+
Sbjct: 68 NGFDMPG-DPEEFVK-GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDEL 118
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 50.0 bits (114), Expect = 2e-07
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = +3
Query: 159 QAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNE----APGPINF 326
+ Q + EAF + D ++D ID +L + +LG N + + ++ + G +
Sbjct: 33 EEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQM 92
Query: 327 TMFLTLFGERLQGTDPEDVIKNAFGCFDEENTGLIGXXXXXXXXXXMGDRFTDDDVDEM 503
F+ + E++ DP + IK AF FD++ TG I + + D +++ M
Sbjct: 93 EDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAM 151
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +3
Query: 174 EFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNEA 308
E +EAF++ D G+ID +DL A LG+N ++ L+ M++ A
Sbjct: 13 EAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLA 57
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 29.9 bits (64), Expect = 0.23
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 174 EFKEAFNMIDQNRDGFIDKDDLHDMLASL-GKNPNEDYLEGMMNE 305
+ K AF + D +RDG+I +L+ +L + G N ED L+ ++++
Sbjct: 94 KLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDK 138
>SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 464
Score = 27.9 bits (59), Expect = 0.92
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 192 NMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNEAPGPINFTMFLTLFGERLQGTD 371
N I + ++ +D + L SL +PN +YLE P P+ + +G + + T
Sbjct: 93 NFIRSYAERIVNNEDKNVFLDSLLLSPNYEYLEENYGTIPVPLAYCNEKDRYGSQRRETV 152
Query: 372 P 374
P
Sbjct: 153 P 153
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 27.9 bits (59), Expect = 0.92
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 108 NKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFID 227
NK Q+ F D + AE+ FN+ D +++G+ID
Sbjct: 44 NKSEFQKIYKQFFPFGDPSAFAEY--VFNVFDADKNGYID 81
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 27.5 bits (58), Expect = 1.2
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 156 DQAQIAEFKEAFNMIDQNRDGFIDKDDLHDML--ASLGKNPNEDYLEGMMNEAPGP 317
+ ++ EF+E N + + +DK D HD + A + K P ++ + A P
Sbjct: 267 ESPRVEEFEELLNQFEGDEKVSVDKIDAHDKMTEAQVVKIPPVQFMNARVAAAENP 322
>SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 26.6 bits (56), Expect = 2.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 66 YIMSSRKTAGRRGTNKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQN 209
Y++ A G++ A TSN A D++ EF+E+F + N
Sbjct: 144 YVLPPSSLANGEGSSMFDADMTTSNAVAHGDESISNEFRESFYFGNDN 191
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 2.8
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -3
Query: 400 PNAFLITSSGSVPCSLSPNNVRNIVKLIGPGASFIMPSK*SSF-GFLPREASMSWRSSLS 224
P +++SS S+P S S + +I + +S +PS SS L S +SLS
Sbjct: 534 PMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLS 593
Query: 223 MNPSLF*SIMLNASLNSAI*AWSNIANT 140
++ S S +AS +S S+I+++
Sbjct: 594 ISSSSTSSTFSSASTSSPSSISSSISSS 621
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 25.4 bits (53), Expect = 4.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 50 LTSNLIHHVFPKNSWTSWHKQ 112
+T+ LIH+ KNSW W +Q
Sbjct: 33 VTTYLIHYKGWKNSWDEWVEQ 53
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 306 PHSSCLPNNLHLDFYQEKPACHGGHLC 226
P SS P+NL+L++ + K H H C
Sbjct: 233 PSSSDSPSNLYLNYPKRKSITHLHHDC 259
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 6.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 146 KYIGSCSLGTFFVCATTSSCFS 81
+Y G C+LG C TT S +
Sbjct: 21 QYYGLCTLGGLLACGTTHSAIT 42
>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1010
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2
Query: 479 EAITHSGQQFTKSFLTDQTSVFLIKTSKCIFD 384
EA+ H G+ ++K TS+ K FD
Sbjct: 872 EAVAHDGRSYSKEIFERATSIMTKHNLKSSFD 903
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 24.6 bits (51), Expect = 8.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 69 IMSSRKTAGR--RGTNKKRAQRATSNVFAMFDQA-QIAEFKEAFNMIDQNRDGFIDKDD 236
+M S + A R G NK A + + F++ +I E ++ MID+N D +++DD
Sbjct: 102 MMQSMRGATRLLTGMNKSMNIPAMARITQQFERENEIMEQRQ--EMIDENMDDALEEDD 158
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,106,514
Number of Sequences: 5004
Number of extensions: 43254
Number of successful extensions: 146
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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