Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J12
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    29   0.090
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   1.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   1.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   1.5  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.9  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.9  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    23   4.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   5.9  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 29.1 bits (62), Expect = 0.090
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 156 DQAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPNEDYLEGMMNEAPGP 317
           +Q    +F E   + D+N DG +   +L   L +LG+  ++  L+ +M +   P
Sbjct: 80  EQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDP 133


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 363 GTDPEDVIKNAFGCFDEENTGLI 431
           G DPE ++ N  G F + NTG +
Sbjct: 348 GQDPESLLINGKGQFRDPNTGFM 370


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 363 GTDPEDVIKNAFGCFDEENTGLI 431
           G DPE ++ N  G F + NTG +
Sbjct: 348 GQDPESLLINGKGQFRDPNTGFM 370


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/66 (22%), Positives = 26/66 (39%)
 Frame = -2

Query: 335 EHCKVNRTWSLIHHAFQIIFIWIFTKRSQHVMEVIFVNEPISILINHVKCLLKLSNLSLV 156
           E  +V   W  +      +F+WIFT         I +  P ++    V   +K+S ++  
Sbjct: 641 ESSRVKEDWKYVAMVLDRLFLWIFTIAVVFGTAGIILQAP-TLYDTRVPIDIKMSEIATT 699

Query: 155 EHSKYI 138
               YI
Sbjct: 700 TAKPYI 705


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 350 TEQC*EHCKVNRTWSLIHHAFQIIFIWIFT 261
           T+   +  KV   W  +      +F+WIFT
Sbjct: 484 TKMLEDSTKVKEDWKYVAMVLDRLFLWIFT 513


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 350 TEQC*EHCKVNRTWSLIHHAFQIIFIWIFT 261
           T+   +  KV   W  +      +F+WIFT
Sbjct: 484 TKMLEDSTKVKEDWKYVAMVLDRLFLWIFT 513


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 198 IDQNRDGFIDKDDLHDMLASLGKNPNEDYLE--GMMNE 305
           I  NR  + D  +   +L SL  +P ED+LE  G+M +
Sbjct: 367 ISVNRQLYGDTHNSGHVLLSLVHDPREDFLESFGVMGD 404


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 470 THSGQQFTKSFLTDQTSVFLI 408
           T  GQQF K F+ D  + FL+
Sbjct: 388 TFVGQQFYKLFIVDFATHFLV 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,997
Number of Sequences: 2352
Number of extensions: 11279
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)