Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J12
(504 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.59
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.59
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 1.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 1.8
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 2.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 3.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 4.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 5.5
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 7.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.6
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 350 TEQC*EHCKVNRTWSLIHHAFQIIFIWIFT 261
T+ + KV W + +F+WIFT
Sbjct: 498 TKMLEDSTKVKEDWKYVAMVLDRLFLWIFT 527
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 350 TEQC*EHCKVNRTWSLIHHAFQIIFIWIFT 261
T+ + KV W + +F+WIFT
Sbjct: 498 TKMLEDSTKVKEDWKYVAMVLDRLFLWIFT 527
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -2
Query: 326 KVNRTWSLIHHAFQIIFIWIFT 261
+V W + +F+WIFT
Sbjct: 501 RVKEDWKYVAMVLDRLFLWIFT 522
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.0 bits (47), Expect = 1.8
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -2
Query: 323 VNRTWSLIHHAFQIIFIWIFT 261
V W + IF+WIFT
Sbjct: 535 VEEDWKYVAMVLDRIFLWIFT 555
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 324 FTMFLTLFGERLQGTDPEDVIKNA 395
FT+ +T+ GE +GT P + A
Sbjct: 182 FTISVTIDGETFEGTGPSKKLAKA 205
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 311 WSLIHHAFQIIFIWIF 264
W+LI HAF+I + F
Sbjct: 215 WTLIEHAFEISTMLFF 230
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 177 FKEAFNMIDQNRDGF 221
F++A M+D+N +GF
Sbjct: 220 FQKALRMVDENINGF 234
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 4.2
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = -2
Query: 320 NRTWSLIHHAFQIIFIWIFT 261
++ W + +F+WIFT
Sbjct: 475 DQDWGFVAMVLDRLFLWIFT 494
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 5.5
Identities = 6/22 (27%), Positives = 11/22 (50%)
Frame = -2
Query: 326 KVNRTWSLIHHAFQIIFIWIFT 261
+V W + +F+W+FT
Sbjct: 469 EVIEDWKFVAMVLDRLFLWVFT 490
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.0 bits (42), Expect = 7.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 400 PNAFLITSSGSVPCSLSPNNV 338
P L+ SSGSV C S +V
Sbjct: 146 PTTCLVFSSGSVSCVPSVKHV 166
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 494 HIVISEAITHSGQQFTKSFL 435
H + A HSG TKS L
Sbjct: 128 HCELHRAACHSGSSLTKSRL 147
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,765
Number of Sequences: 438
Number of extensions: 2737
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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