Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J11
(246 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:... 142 2e-33
UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-P... 134 3e-31
UniRef50_UPI0000E1F213 Cluster: PREDICTED: hypothetical protein;... 132 1e-30
UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115; Bilateria|... 131 3e-30
UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n... 95 4e-19
UniRef50_Q9VRX3 Cluster: Probable tubulin beta chain CG32396; n=... 93 1e-18
UniRef50_A4HQN7 Cluster: Putative betatubulin; n=1; Nidula niveo... 85 2e-16
UniRef50_A5AW70 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-15
UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep: Beta-... 79 2e-14
UniRef50_A2E9Y7 Cluster: Tubulin/FtsZ family, C-terminal domain ... 75 4e-13
UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, b... 73 9e-13
UniRef50_Q86ZZ0 Cluster: Alpha-tubulin; n=2; Pansporablastina|Re... 73 2e-12
UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain cont... 72 2e-12
UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta tub... 71 7e-12
UniRef50_UPI0000ECCDAD Cluster: UPI0000ECCDAD related cluster; n... 70 9e-12
UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome sh... 69 2e-11
UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1; ... 64 6e-10
UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970; Eukaryot... 63 1e-09
UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493; Eukaryota... 62 2e-09
UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN fu... 62 2e-09
UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia ryukyuensis... 60 7e-09
UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8; Prosthecobact... 60 9e-09
UniRef50_UPI0000DC0432 Cluster: UPI0000DC0432 related cluster; n... 58 3e-08
UniRef50_P23258 Cluster: Tubulin gamma-1 chain; n=213; cellular ... 58 4e-08
UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin al... 58 5e-08
UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 58 5e-08
UniRef50_Q6JAE0 Cluster: Putative tubulin gamma-2 chain; n=1; Ze... 55 3e-07
UniRef50_A2EAH1 Cluster: Gamma tubulin, putative; n=5; Eukaryota... 55 3e-07
UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-07
UniRef50_A5HWB9 Cluster: Bacterial tubulin A2; n=7; Prosthecobac... 54 6e-07
UniRef50_A0DAZ7 Cluster: Chromosome undetermined scaffold_43, wh... 54 8e-07
UniRef50_Q4QC95 Cluster: Epsilon tubulin, putative; n=6; Trypano... 52 2e-06
UniRef50_Q3SEG7 Cluster: Theta tubuline, putative; n=1; Parameci... 52 2e-06
UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep: Alph... 52 2e-06
UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain cont... 52 3e-06
UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain cont... 50 1e-05
UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium ... 49 2e-05
UniRef50_A1CPB9 Cluster: Tubulin gamma chain; n=9; Fungi/Metazoa... 49 2e-05
UniRef50_UPI0000DB71EB Cluster: PREDICTED: similar to epsilon-tu... 48 3e-05
UniRef50_Q0D0J3 Cluster: Tubulin gamma chain; n=6; Fungi/Metazoa... 48 3e-05
UniRef50_A6RFR4 Cluster: Tubulin gamma chain; n=1; Ajellomyces c... 48 3e-05
UniRef50_Q22YZ9 Cluster: Tubulin/FtsZ family, GTPase domain cont... 48 5e-05
UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium ... 47 9e-05
UniRef50_Q22E27 Cluster: Tubulin/FtsZ family, C-terminal domain ... 47 9e-05
UniRef50_Q7QZN1 Cluster: GLP_680_43068_44504; n=1; Giardia lambl... 46 2e-04
UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain cont... 46 2e-04
UniRef50_Q9D6T1 Cluster: Tubulin epsilon chain; n=9; Eukaryota|R... 46 2e-04
UniRef50_UPI0000D5556D Cluster: PREDICTED: similar to epsilon-tu... 46 2e-04
UniRef50_Q9UJT0 Cluster: Tubulin epsilon chain; n=30; Eukaryota|... 46 2e-04
UniRef50_A7NXT4 Cluster: Chromosome chr5 scaffold_2, whole genom... 45 4e-04
UniRef50_UPI00015B54E0 Cluster: PREDICTED: similar to Tubulin, e... 44 5e-04
UniRef50_Q3ZJ98 Cluster: Tubulin gamma subunit; n=1; Monocercomo... 44 7e-04
UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain cont... 43 0.001
UniRef50_Q5B2Z8 Cluster: Putative uncharacterized protein; n=1; ... 43 0.001
UniRef50_Q7R2Q0 Cluster: GLP_546_6876_8351; n=1; Giardia lamblia... 42 0.002
UniRef50_Q49MM4 Cluster: Beta-tubulin; n=1; Cactodera betulae|Re... 42 0.003
UniRef50_A2ELX8 Cluster: Tubulin/FtsZ family, GTPase domain cont... 40 0.008
UniRef50_A1BPT4 Cluster: Tubulin-like protein; n=1; Lygus lineol... 40 0.008
UniRef50_Q24D61 Cluster: Tubulin/FtsZ family, GTPase domain cont... 39 0.019
UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin, a... 39 0.024
UniRef50_Q4UCK3 Cluster: Tubulin gamma-chain (Gamma-tubulin), pu... 38 0.043
UniRef50_Q3SEF7 Cluster: Alpha-tubulin,putative; n=3; Paramecium... 38 0.043
UniRef50_Q8IK81 Cluster: Tubulin, putative; n=9; Plasmodium|Rep:... 37 0.075
UniRef50_Q3SEF9 Cluster: Alpha-tubulin,putative; n=1; Paramecium... 36 0.17
UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1... 36 0.23
UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n... 35 0.40
UniRef50_Q24HJ8 Cluster: Tubulin/FtsZ family, GTPase domain cont... 35 0.40
UniRef50_O93807 Cluster: Tubulin gamma chain; n=8; Saccharomycet... 34 0.70
UniRef50_Q3SEH6 Cluster: Iota_tubulin,putative; n=2; Paramecium ... 33 0.92
UniRef50_Q3SEG4 Cluster: Alpha-tubulin,putative; n=1; Paramecium... 33 0.92
UniRef50_P53378 Cluster: Tubulin gamma chain; n=5; Saccharomycet... 33 0.92
UniRef50_P54401 Cluster: Tubulin gamma chain; n=3; Entamoeba his... 33 0.92
UniRef50_Q7QW53 Cluster: GLP_457_13116_11626; n=1; Giardia lambl... 32 2.1
UniRef50_UPI00005103F0 Cluster: COG1357: Uncharacterized low-com... 32 2.8
UniRef50_UPI00006CA67A Cluster: Tubulin/FtsZ family, GTPase doma... 31 4.9
UniRef50_Q3JBW6 Cluster: Putative uncharacterized protein precur... 31 4.9
UniRef50_A4I4R5 Cluster: Putative uncharacterized protein; n=3; ... 31 4.9
UniRef50_A2QHU0 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_UPI0000F21875 Cluster: PREDICTED: similar to ankyrin 3;... 30 8.6
UniRef50_UPI0000E2189B Cluster: PREDICTED: hypothetical protein;... 30 8.6
UniRef50_A0L418 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_Q9T3Y9 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
>UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:
Tubulin beta-4 chain - Homo sapiens (Human)
Length = 444
Score = 142 bits (343), Expect = 2e-33
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
TCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQMFDAK
Sbjct: 238 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAK 297
Query: 226 NMMAACD 246
NMMAACD
Sbjct: 298 NMMAACD 304
>UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA -
Drosophila melanogaster (Fruit fly)
Length = 522
Score = 134 bits (325), Expect = 3e-31
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
TCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPLT++GSQQYRALTV ELTQQMFDAK
Sbjct: 303 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAK 362
Query: 226 NMMAACD 246
NMM ACD
Sbjct: 363 NMMTACD 369
>UniRef50_UPI0000E1F213 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 580
Score = 132 bits (319), Expect = 1e-30
Identities = 60/66 (90%), Positives = 63/66 (95%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLNADLRKLA+NM PFP+LHFF+ GFAPLTSRGSQQYRALTV ELTQQMFDAKN
Sbjct: 458 CLRFPGQLNADLRKLAMNMAPFPQLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKN 517
Query: 229 MMAACD 246
MMAACD
Sbjct: 518 MMAACD 523
>UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115;
Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis
elegans
Length = 450
Score = 131 bits (316), Expect = 3e-30
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
TCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPL+++G+Q YRALTV ELTQQMFDAK
Sbjct: 238 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAK 297
Query: 226 NMMAACD 246
NMMAACD
Sbjct: 298 NMMAACD 304
>UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n=1;
Mus musculus|Rep: UPI00005639CD UniRef100 entry - Mus
musculus
Length = 377
Score = 94.7 bits (225), Expect = 4e-19
Identities = 47/60 (78%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +1
Query: 61 PGQLNADLRKLAVNMVPF-PRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 237
P +LN DL KLAVNMVPF P LHFF+ GF LTSRG QQY+ALT+PELTQQMFDAKNMMA
Sbjct: 212 PCKLNVDLCKLAVNMVPFSPCLHFFMLGFPLLTSRGIQQYQALTIPELTQQMFDAKNMMA 271
>UniRef50_Q9VRX3 Cluster: Probable tubulin beta chain CG32396; n=1;
Drosophila melanogaster|Rep: Probable tubulin beta chain
CG32396 - Drosophila melanogaster (Fruit fly)
Length = 462
Score = 92.7 bits (220), Expect = 1e-18
Identities = 43/67 (64%), Positives = 50/67 (74%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
TCLRFPGQLNA LRK+ VNMVPFPRLHF I GFAPL + QQ+ TV EL QQ+F +
Sbjct: 237 TCLRFPGQLNAGLRKIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSN 296
Query: 226 NMMAACD 246
N++ A D
Sbjct: 297 NLLCAID 303
>UniRef50_A4HQN7 Cluster: Putative betatubulin; n=1; Nidula
niveotomentosa|Rep: Putative betatubulin - Nidula
niveotomentosa
Length = 173
Score = 85.4 bits (202), Expect = 2e-16
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
T LRFPGQLN DLRKLA N++PFPRLHF + +AP + + +VP+LT+ +FD K
Sbjct: 7 TSLRFPGQLNGDLRKLATNLIPFPRLHFLMPSYAPFFDAKASHFEKSSVPDLTKAVFDRK 66
Query: 226 NMMAAC 243
N++ AC
Sbjct: 67 NLLVAC 72
>UniRef50_A5AW70 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 581
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1
Query: 70 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACD 246
+ DL K VN++ FPRL+FF+ GFAPLTS GSQQYR LT PELT+Q +D KN+M D
Sbjct: 143 MTPDLWKFVVNLMSFPRLYFFMVGFAPLTSHGSQQYRTLTFPELTRQTWDTKNIMCVAD 201
>UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep:
Beta-tubulin - Reticulomyxa filosa
Length = 473
Score = 79.0 bits (186), Expect = 2e-14
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRFPG+LN DLRK+AVN+VPFPRLHFF+ +PL + G LT+ E+T QM+ ++N
Sbjct: 246 LRFPGKLNGDLRKMAVNLVPFPRLHFFLIAQSPLFAPGEGAKVKLTIQEITDQMWSSRNF 305
Query: 232 MA 237
MA
Sbjct: 306 MA 307
>UniRef50_A2E9Y7 Cluster: Tubulin/FtsZ family, C-terminal domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Tubulin/FtsZ family, C-terminal domain containing
protein - Trichomonas vaginalis G3
Length = 320
Score = 74.5 bits (175), Expect = 4e-13
Identities = 30/65 (46%), Positives = 47/65 (72%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
+RFPG LN+D+RKLA N+ PF R+H+F++ APLT G +Q T+P +T +F+ KN+
Sbjct: 106 MRFPGMLNSDMRKLATNLTPFYRMHYFVSSVAPLTPEGVKQ----TIPSITTDLFNTKNI 161
Query: 232 MAACD 246
+ +C+
Sbjct: 162 LVSCN 166
>UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, beta
3; n=2; Canis lupus familiaris|Rep: PREDICTED: similar
to tubulin, beta 3 - Canis familiaris
Length = 363
Score = 73.3 bits (172), Expect = 9e-13
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1
Query: 142 FAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACD 246
FAPLT+RGSQ YRALTVPELTQQMFDAKNMMAACD
Sbjct: 194 FAPLTARGSQHYRALTVPELTQQMFDAKNMMAACD 228
>UniRef50_Q86ZZ0 Cluster: Alpha-tubulin; n=2; Pansporablastina|Rep:
Alpha-tubulin - Trachipleistophora hominis
Length = 386
Score = 72.5 bits (170), Expect = 2e-12
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRFPG LN DL + N+VP+PR+HF + ++P+ SR + L+V E+T FD+KN
Sbjct: 216 LRFPGDLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSREKASHEQLSVQEITSACFDSKNQ 275
Query: 232 MAACD 246
M C+
Sbjct: 276 MVKCN 280
>UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 436
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +1
Query: 46 TC-LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDA 222
TC LRFPG N+DLRK+A+N++PFPRLHF ++ AP SRGS Q PE+ +++
Sbjct: 237 TCTLRFPGLFNSDLRKIALNLIPFPRLHFLMSAIAPSYSRGSTQCYPPKFPEIKNLVYNP 296
Query: 223 KNMMAACD 246
+ M+ + D
Sbjct: 297 RTMLCSTD 304
>UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta
tubulin - Aspergillus oryzae
Length = 817
Score = 70.5 bits (165), Expect = 7e-12
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
C RFPGQLN+DLRKL MVP RLHFF G +PL+ + S+ + +VP +TQ++F + +
Sbjct: 631 CFRFPGQLNSDLRKLTTTMVPLSRLHFFTLGVSPLSRQTSE---SSSVPRITQKLFSSDS 687
Query: 229 MMAACD 246
+ A+ D
Sbjct: 688 IAASVD 693
>UniRef50_UPI0000ECCDAD Cluster: UPI0000ECCDAD related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCDAD UniRef100 entry -
Gallus gallus
Length = 197
Score = 70.1 bits (164), Expect = 9e-12
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = -1
Query: 234 HHVLSVEHLLRQLGDGERAVLLTAARREGSKTSNKKVQTWEWHHVHCQLTEIGIQLTGKP 55
HHVL VEHLLRQLG + +VLL AA R+ + ++++Q E HHV QL ++G+QL G+
Sbjct: 120 HHVLGVEHLLRQLGHRQGSVLLAAAARQRGEARHEEMQPGERHHVDRQLAQVGVQLAGEA 179
Query: 54 EAG 46
+AG
Sbjct: 180 KAG 182
>UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 404
Score = 69.3 bits (162), Expect = 2e-11
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN DL + N+VP+PR+HF + +AP+ S G + LTV ELT F+ N
Sbjct: 197 LRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAGKAYHEQLTVTELTSACFEPTNQ 256
Query: 232 MAACD 246
M CD
Sbjct: 257 MVKCD 261
>UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 573
Score = 64.1 bits (149), Expect = 6e-10
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN DL + N+VP+PR+H+ + +AP+ S + + ELT Q F+ N
Sbjct: 231 LRFDGALNVDLNEFQTNLVPYPRIHYPLISYAPVISAARSSHESFKTQELTLQCFEPNNQ 290
Query: 232 MAACD 246
M CD
Sbjct: 291 MVVCD 295
>UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970;
Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens
(Human)
Length = 451
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 242 LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 301
Query: 232 MAACD 246
M CD
Sbjct: 302 MVKCD 306
>UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493;
Eukaryota|Rep: Tubulin alpha-1 chain - Saccharomyces
cerevisiae (Baker's yeast)
Length = 447
Score = 62.5 bits (145), Expect = 2e-09
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN DL + N+VP+PR+HF + ++P+ S+ + + +V E+T F+ N
Sbjct: 243 LRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYSPVLSKSKAFHESNSVSEITNACFEPGNQ 302
Query: 232 MAACD 246
M CD
Sbjct: 303 MVKCD 307
>UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN
full-length enriched library, clone:7420443F16
product:similar to Alpha tubulin; n=4; Murinae|Rep: In
vitro fertilized eggs cDNA, RIKEN full-length enriched
library, clone:7420443F16 product:similar to Alpha
tubulin - Mus musculus (Mouse)
Length = 446
Score = 62.1 bits (144), Expect = 2e-09
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN DL + N+VP+PR+HF IT AP+ S L+V ++T F+ N
Sbjct: 249 LRFEGPLNVDLIEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQ 308
Query: 232 MAACD 246
+ CD
Sbjct: 309 LVKCD 313
>UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia
ryukyuensis|Rep: Alpha-tubulin - Dugesia ryukyuensis
Length = 534
Score = 60.5 bits (140), Expect = 7e-09
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
+RF LN DL +L N+VP+PR+HF +AP+ + L++ E+T+++F++ N
Sbjct: 241 IRFGSSLNHDLLQLQTNLVPYPRIHFPAVNYAPILDPHRANHEKLSITEITRELFESSNQ 300
Query: 232 MAACD 246
+ CD
Sbjct: 301 LIKCD 305
>UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8;
Prosthecobacter|Rep: Bacterial tubulin B -
Prosthecobacter vanneervenii
Length = 442
Score = 60.1 bits (139), Expect = 9e-09
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRFPG+LN DL + N+VPFP HF FAP+ + G + + P++ ++ F N
Sbjct: 258 LRFPGKLNTDLGEYVTNLVPFPGNHFLTASFAPMRAPGQEGQVRINFPDIARETFAQDNF 317
Query: 232 MAACD 246
AA D
Sbjct: 318 TAAID 322
>UniRef50_UPI0000DC0432 Cluster: UPI0000DC0432 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0432 UniRef100 entry -
Rattus norvegicus
Length = 200
Score = 58.4 bits (135), Expect = 3e-08
Identities = 34/65 (52%), Positives = 39/65 (60%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
L F GQ N+DL AVNMV F LHFF GF PL + LTV ++TQQ+F AKNM
Sbjct: 1 LLFSGQFNSDLCTRAVNMVLFLCLHFFKPGFTPLIAWTVSSIVTLTVSKITQQLF-AKNM 59
Query: 232 MAACD 246
M D
Sbjct: 60 MITGD 64
>UniRef50_P23258 Cluster: Tubulin gamma-1 chain; n=213; cellular
organisms|Rep: Tubulin gamma-1 chain - Homo sapiens
(Human)
Length = 451
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGS-QQYRALTVPELTQQMFDA 222
T LR+PG +N DL L +++P PRLHF +TG+ PLT+ S R TV ++ +++
Sbjct: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
Query: 223 KNMMAA 240
KN+M +
Sbjct: 301 KNVMVS 306
>UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin
alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6); n=1; Apis mellifera|Rep: PREDICTED: similar
to Tubulin alpha-6 chain (Alpha-tubulin 6)
(Alpha-tubulin isotype M-alpha-6) - Apis mellifera
Length = 542
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
+RF G +N L++L N+VP+PR+HF +T +APL S Y +T +T F N
Sbjct: 243 MRFEGAVNVSLQELQTNLVPYPRIHFSLTTYAPLISPRRGLYAEITTQRITNDCFIPSNQ 302
Query: 232 MAACD 246
M + D
Sbjct: 303 MLSID 307
>UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 416
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ N
Sbjct: 241 LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 300
Query: 232 M 234
M
Sbjct: 301 M 301
>UniRef50_Q6JAE0 Cluster: Putative tubulin gamma-2 chain; n=1; Zea
mays|Rep: Putative tubulin gamma-2 chain - Zea mays
(Maize)
Length = 449
Score = 55.2 bits (127), Expect = 3e-07
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLT-SRGSQQYRALTVPELTQQMFDA 222
T LR PG +N DL L +++P PR HF +TG+ PLT R R TV ++ +++
Sbjct: 27 TTLRHPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQT 86
Query: 223 KNMMAA 240
KN+M +
Sbjct: 87 KNVMVS 92
>UniRef50_A2EAH1 Cluster: Gamma tubulin, putative; n=5;
Eukaryota|Rep: Gamma tubulin, putative - Trichomonas
vaginalis G3
Length = 457
Score = 55.2 bits (127), Expect = 3e-07
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQY-RALTVPELTQQMFDAKN 228
LRFP N DL L +VP P+ HF +TG+ P+T +QY + +V E+ ++ D KN
Sbjct: 253 LRFPAYSNNDLVSLLAPLVPTPKCHFLMTGYTPITLPSMRQYIQKTSVIEVMNRLLDKKN 312
Query: 229 MMAACD 246
+M + D
Sbjct: 313 IMVSTD 318
>UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 804
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQ 210
T LRF G LN DL + N+VPFPR+H+ + +AP+ S Y++ V +LT Q
Sbjct: 698 TSLRFNGDLNIDLNEFQTNLVPFPRIHYPLILYAPVISSSCSTYKSFKVKDLTLQ 752
>UniRef50_A5HWB9 Cluster: Bacterial tubulin A2; n=7;
Prosthecobacter|Rep: Bacterial tubulin A2 -
Prosthecobacter debontii
Length = 497
Score = 54.0 bits (124), Expect = 6e-07
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 52 LRFPGQLNAD--LRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
+RF G L + LR+L N+VP P LHF + FAPLT ++ + + E+ + MF +
Sbjct: 244 MRFSGFLTVEISLRELLTNLVPQPSLHFLMCTFAPLTPPHQSKFEEMGIEEMIESMFRNE 303
Query: 226 NMMAAC 243
+M AAC
Sbjct: 304 SMFAAC 309
>UniRef50_A0DAZ7 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 400
Score = 53.6 bits (123), Expect = 8e-07
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
T +R+ G L D+ +L ++VP+ +L F I +AP+ S + L+ E+ + F+
Sbjct: 104 TSMRYDGALLRDMAELETSLVPYAKLKFLICSYAPIISHQKVDHMQLSTVEIAKLAFETT 163
Query: 226 NMMAACD 246
NMMA CD
Sbjct: 164 NMMAKCD 170
>UniRef50_Q4QC95 Cluster: Epsilon tubulin, putative; n=6;
Trypanosomatidae|Rep: Epsilon tubulin, putative -
Leishmania major
Length = 470
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 VADHVWRYTC-LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLT 156
VA + TC +RFPG LN D+ ++ N+VPFPRLHF APL+
Sbjct: 248 VAQLLSNLTCAMRFPGPLNMDINEITTNLVPFPRLHFLTAAIAPLS 293
>UniRef50_Q3SEG7 Cluster: Theta tubuline, putative; n=1; Paramecium
tetraurelia|Rep: Theta tubuline, putative - Paramecium
tetraurelia
Length = 417
Score = 52.4 bits (120), Expect = 2e-06
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +1
Query: 22 VADHVWRYTC-LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRG--SQQYRALTV 192
+A+ + + C +RFPG N DLRKLAVN++ FPR+HF F ++ S Q LT
Sbjct: 221 IAETLLQNNCSMRFPGYQNGDLRKLAVNLISFPRMHFLSNAFCVISPSKILSNQIYKLTE 280
Query: 193 PELTQQMF--DAKN 228
P F DAKN
Sbjct: 281 PANQNFTFSEDAKN 294
>UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep:
Alpha-tubulin - Schmidtea polychroa (Freshwater
planarian flatworm) (Dugesiapolychroa)
Length = 489
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/56 (33%), Positives = 36/56 (64%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFD 219
LR+ LNA+L ++ N++P+PR+HF + ++P+ S + +V ELT+ +F+
Sbjct: 241 LRYESSLNANLSQIVTNLIPYPRIHFSMVNYSPIVSAQRAAHEQFSVVELTRNVFE 296
>UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 450
Score = 51.6 bits (118), Expect = 3e-06
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMF 216
+RF G LN DL +L +N+VP+ +++ I ++P T + +QQ + ++V +T Q+F
Sbjct: 242 IRFKGDLNFDLNQLIMNLVPYRKINLVIPSYSPSTDKNNQQNQQMSVNSMTNQLF 296
>UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 459
Score = 49.6 bits (113), Expect = 1e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
RFP Q+ +RKLA NMVPFP+L F TG AP+ R+L+ E+ + + +N
Sbjct: 239 RFPSQVYNTMRKLATNMVPFPQLLFLNTGVAPILHHEFVTNRSLSTKEMISMLQNNRN 296
>UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Beta tubulin,putative - Paramecium
tetraurelia
Length = 430
Score = 49.2 bits (112), Expect = 2e-05
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 22 VADHVWRYTCL-RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPE 198
+A+ + + C RFPG N D +KL+ N++PFPRLHF F P+ + + +
Sbjct: 225 IAECLLQMNCSQRFPGYQNGDQKKLSTNLIPFPRLHFLTCAFTPIEIVSDLNQKLINLCL 284
Query: 199 LTQQMFDAKN 228
T F +N
Sbjct: 285 PTNSYFSFQN 294
>UniRef50_A1CPB9 Cluster: Tubulin gamma chain; n=9; Fungi/Metazoa
group|Rep: Tubulin gamma chain - Aspergillus clavatus
Length = 488
Score = 48.8 bits (111), Expect = 2e-05
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQ---YRALTVPELTQQMF 216
T LR+PG ++ DL + +++P PR HF IT + P T +Q R TV ++ +++
Sbjct: 273 TTLRYPGYMHNDLVGIIASLIPTPRSHFLITSYTPFTGDNVEQAKTVRKTTVLDVMRRLL 332
Query: 217 DAKNMMAA 240
KN M +
Sbjct: 333 QPKNRMVS 340
>UniRef50_UPI0000DB71EB Cluster: PREDICTED: similar to
epsilon-tubulin 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to epsilon-tubulin 1 - Apis mellifera
Length = 420
Score = 48.4 bits (110), Expect = 3e-05
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLT 156
RFPG LN D+ ++A N+VP+P+LH+ ++ +P+T
Sbjct: 218 RFPGNLNMDMNEIATNLVPYPKLHYILSSVSPVT 251
>UniRef50_Q0D0J3 Cluster: Tubulin gamma chain; n=6; Fungi/Metazoa
group|Rep: Tubulin gamma chain - Aspergillus terreus
(strain NIH 2624)
Length = 450
Score = 48.4 bits (110), Expect = 3e-05
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQ---YRALTVPELTQQMF 216
T LR+PG ++ DL + +++P PR HF IT + P T Q R TV ++ +++
Sbjct: 235 TTLRYPGYMHNDLCGIVASLIPTPRSHFLITSYTPFTGDNIDQAKTVRKTTVLDVMRRLL 294
Query: 217 DAKNMMAA 240
KN M +
Sbjct: 295 QPKNRMVS 302
>UniRef50_A6RFR4 Cluster: Tubulin gamma chain; n=1; Ajellomyces
capsulatus NAm1|Rep: Tubulin gamma chain - Ajellomyces
capsulatus NAm1
Length = 655
Score = 48.4 bits (110), Expect = 3e-05
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQ---YRALTVPELTQQMF 216
T LR+PG ++ DL + N++P PR F IT + P T +Q R TV ++ +++
Sbjct: 443 TTLRYPGYMHNDLVSILANLIPDPRTRFLITSYTPFTGDNVEQAKTVRKTTVLDVMRRLL 502
Query: 217 DAKNMMAA 240
KN M +
Sbjct: 503 QPKNRMVS 510
>UniRef50_Q22YZ9 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 498
Score = 47.6 bits (108), Expect = 5e-05
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMF 216
+RF G LN DL ++ +N+VP+P LHF I+ APL S + P QMF
Sbjct: 300 MRFEGVLNVDLNEITMNLVPYPDLHFLISSIAPLYSLSDSNLQ----PRRLDQMF 350
>UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium
tetraurelia|Rep: Beta tubulin,putative - Paramecium
tetraurelia
Length = 426
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSR 162
RFPG LN ++KL +N++PFPRLHFF + + R
Sbjct: 236 RFPGFLNGGMKKLTLNLIPFPRLHFFQPSYMIINQR 271
>UniRef50_Q22E27 Cluster: Tubulin/FtsZ family, C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 281
Score = 46.8 bits (106), Expect = 9e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPEL 201
+RFPGQLN RKLA N++PF R F + PL+ + + T EL
Sbjct: 78 IRFPGQLNISTRKLATNLIPFRRYSFLLNQLYPLSGKNFNHASSFTEREL 127
>UniRef50_Q7QZN1 Cluster: GLP_680_43068_44504; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_43068_44504 - Giardia lamblia
ATCC 50803
Length = 478
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPL 153
+RF G+LN DL +L+VN+VPFP L+ T APL
Sbjct: 273 MRFGGELNVDLNELSVNLVPFPELNLVCTSLAPL 306
>UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 431
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 43 YTC-LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFD 219
+TC +R+PG +NA RK+ N+VPF R+ F P Q L + ++ Q +
Sbjct: 236 FTCGIRYPGSINASSRKICTNLVPFARVKMMTATFLPFNYFRQNQISQLELTDMIPQTLN 295
Query: 220 AKN 228
KN
Sbjct: 296 EKN 298
>UniRef50_Q9D6T1 Cluster: Tubulin epsilon chain; n=9; Eukaryota|Rep:
Tubulin epsilon chain - Mus musculus (Mouse)
Length = 475
Score = 46.0 bits (104), Expect = 2e-04
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPL 153
RF G LN DL ++++N+VPFP+LH+ ++ PL
Sbjct: 274 RFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPL 306
>UniRef50_UPI0000D5556D Cluster: PREDICTED: similar to
epsilon-tubulin 1; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to epsilon-tubulin 1 - Tribolium
castaneum
Length = 432
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLT----SRGSQQYRALTVPELTQQMFDA 222
RF G++N D+ ++ NMVPFP+L+F +G++P + + +Y A++V L + +
Sbjct: 266 RFGGKMNIDMNEINTNMVPFPKLNFLASGYSPFRLKNFNSSAHRYMAMSVTLLGRGNYSI 325
Query: 223 KNMMAACD 246
+M D
Sbjct: 326 NDMRGYID 333
>UniRef50_Q9UJT0 Cluster: Tubulin epsilon chain; n=30;
Eukaryota|Rep: Tubulin epsilon chain - Homo sapiens
(Human)
Length = 475
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPL 153
RF G LN DL ++++N+VPFP+LH+ ++ PL
Sbjct: 274 RFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPL 306
>UniRef50_A7NXT4 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 100
Score = 44.8 bits (101), Expect = 4e-04
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 175 YRALTVPELTQQMFDAKNMMAACD 246
Y ALTVPELTQQM+DAKNMM A D
Sbjct: 64 YHALTVPELTQQMWDAKNMMCATD 87
>UniRef50_UPI00015B54E0 Cluster: PREDICTED: similar to Tubulin,
epsilon 1; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to Tubulin, epsilon 1 - Nasonia vitripennis
Length = 478
Score = 44.4 bits (100), Expect = 5e-04
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQ 171
RFPG LN D+ +LA N+V +P+LH+ + +P+ SQ
Sbjct: 276 RFPGCLNTDMNELATNLVAYPQLHYIFSSVSPVALTASQ 314
>UniRef50_Q3ZJ98 Cluster: Tubulin gamma subunit; n=1;
Monocercomonoides sp. PA203|Rep: Tubulin gamma subunit -
Monocercomonoides sp. PA203
Length = 479
Score = 44.0 bits (99), Expect = 7e-04
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRG-SQQYRALTVPELTQQMFDAKN 228
LRFP +N DL + +++P PR HF +T + P TS +Q R +V ++ +++
Sbjct: 244 LRFPSYMNNDLVSILSSLIPTPRCHFLMTAYTPFTSTTVTQSIRKTSVMDVLRRLLHPHQ 303
Query: 229 MMAA 240
M +
Sbjct: 304 AMVS 307
>UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 443
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 22 VADHVWRYTC-LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPE 198
+A V + TC LRF + L N++P+P+ F ++ ++P L+ E
Sbjct: 228 IAQAVSQLTCGLRFDDEQQNHLSDFEKNLIPYPKFCFMLSSYSPFIFTQQINSIQLSTQE 287
Query: 199 LTQQMFDAKNMMAACD 246
++ +F+ NMMA C+
Sbjct: 288 ISSFLFEPSNMMAKCN 303
>UniRef50_Q5B2Z8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 599
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQ 210
T L F LN DL + N+VPFP +++ + + P+ S Y++ V +LT Q
Sbjct: 169 TSLHFNSDLNIDLNEFQTNLVPFPCIYYPLILYTPVISSSCSTYKSFKVKDLTLQ 223
>UniRef50_Q7R2Q0 Cluster: GLP_546_6876_8351; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_546_6876_8351 - Giardia lamblia ATCC
50803
Length = 491
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTS 159
LR PG ++ DL L ++VP PRLHF ++ + P+TS
Sbjct: 262 LRLPGFMSNDLLSLVSSLVPTPRLHFLMSSYTPITS 297
>UniRef50_Q49MM4 Cluster: Beta-tubulin; n=1; Cactodera betulae|Rep:
Beta-tubulin - Cactodera betulae
Length = 83
Score = 41.9 bits (94), Expect = 0.003
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 58 FPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
FPG ++ P P PL+++G+ Y+AL+V ELT+QMFDAK
Sbjct: 28 FPGSTECRPSQVGRQHGPLPAPALLHARLRPLSAKGAAAYQALSVSELTKQMFDAK 83
>UniRef50_A2ELX8 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Tubulin/FtsZ family, GTPase domain containing protein -
Trichomonas vaginalis G3
Length = 434
Score = 40.3 bits (90), Expect = 0.008
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPL 153
RF G++N DL ++ NMVPFP F + G +P+
Sbjct: 241 RFSGKMNVDLSEIETNMVPFPHHKFLVGGISPI 273
>UniRef50_A1BPT4 Cluster: Tubulin-like protein; n=1; Lygus
lineolaris|Rep: Tubulin-like protein - Lygus lineolaris
(Tarnished plant bug)
Length = 242
Score = 40.3 bits (90), Expect = 0.008
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
T LRF +L D N++P+PRLHF + +P+ +Y TV ++T + F++
Sbjct: 166 TGLRFDCRLMTDFFDFQTNLIPYPRLHFPVVSLSPIVXCQFDEY--WTVNDITSRAFESS 223
Query: 226 NMMA 237
+A
Sbjct: 224 CRLA 227
>UniRef50_Q24D61 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 441
Score = 39.1 bits (87), Expect = 0.019
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHF 129
RFP Q++ D+RK A+N+VPFP L++
Sbjct: 239 RFPSQISNDIRKFAMNLVPFPNLNY 263
>UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin,
alpha 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to tubulin, alpha 1 - Canis familiaris
Length = 300
Score = 38.7 bits (86), Expect = 0.024
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRA 183
L F G LN DL + N+VP+PR+HF + +A + + R+
Sbjct: 246 LGFDGALNVDLMEFQTNLVPYPRIHFPLATYAISAEKAYHEQRS 289
>UniRef50_Q4UCK3 Cluster: Tubulin gamma-chain (Gamma-tubulin),
putative; n=2; Theileria|Rep: Tubulin gamma-chain
(Gamma-tubulin), putative - Theileria annulata
Length = 490
Score = 37.9 bits (84), Expect = 0.043
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFIT 138
+C+RFPG +N DL L ++V PR HF I+
Sbjct: 290 SCIRFPGPINNDLISLVSSLVIIPRCHFLIS 320
>UniRef50_Q3SEF7 Cluster: Alpha-tubulin,putative; n=3; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 426
Score = 37.9 bits (84), Expect = 0.043
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 73 NADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQM 213
N D KL + P+PR+HF I + PL S + LT +L Q+
Sbjct: 230 NIDNSKLFTGLCPYPRVHFVIPSYGPLASINDYNNKELTEKQLISQI 276
>UniRef50_Q8IK81 Cluster: Tubulin, putative; n=9; Plasmodium|Rep:
Tubulin, putative - Plasmodium falciparum (isolate 3D7)
Length = 519
Score = 37.1 bits (82), Expect = 0.075
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAP 150
+RF G LN D+ ++ N++P+P +F ++ +P
Sbjct: 271 MRFEGSLNVDINEICTNLIPYPFFNFLLSSLSP 303
>UniRef50_Q3SEF9 Cluster: Alpha-tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 551
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
RF G DL ++ +N+VP P F +AP + Q + ++T +FD ++
Sbjct: 245 RFNGSKFVDLIEMRMNVVPEPDFQFLHASYAPFINIDKQNTELTNLQQITNSLFDQRS 302
>UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1C
protein - Homo sapiens (Human)
Length = 325
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 121 LHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACD 246
+HF + +AP+ S + LTV E+T F+ N M CD
Sbjct: 135 VHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCD 176
>UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0F37 UniRef100 entry -
Rattus norvegicus
Length = 410
Score = 34.7 bits (76), Expect = 0.40
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
L F G L+ DL + N+V +P++HF T + + S + +V E+T F+ N
Sbjct: 210 LGFDG-LDVDLTEFQTNLVHYPQMHFPAT-YTLVISTEKAYHEQHSVAEITSTCFEPANH 267
Query: 232 MAAC 243
M C
Sbjct: 268 MVKC 271
>UniRef50_Q24HJ8 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=2; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 447
Score = 34.7 bits (76), Expect = 0.40
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 55 RFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPEL 201
R+ G +NA RK+ N++PFPRL PL +Q L E+
Sbjct: 240 RYHGSINASTRKICTNIIPFPRLKHMSMICLPLNYYKQKQQTQLDYIEM 288
>UniRef50_O93807 Cluster: Tubulin gamma chain; n=8;
Saccharomycetales|Rep: Tubulin gamma chain - Candida
albicans (Yeast)
Length = 502
Score = 33.9 bits (74), Expect = 0.70
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSR 162
LRFPG + + + + N++P P L F + AP +++
Sbjct: 278 LRFPGYMYSSMESIVSNLIPTPDLKFLTSSIAPFSTQ 314
>UniRef50_Q3SEH6 Cluster: Iota_tubulin,putative; n=2; Paramecium
tetraurelia|Rep: Iota_tubulin,putative - Paramecium
tetraurelia
Length = 408
Score = 33.5 bits (73), Expect = 0.92
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 43 YTCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTS 159
Y R N + K+ N+ PFP+LH + APL S
Sbjct: 215 YKSFRHNSYSNTNFYKIQTNITPFPKLHCYTVSLAPLFS 253
>UniRef50_Q3SEG4 Cluster: Alpha-tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 461
Score = 33.5 bits (73), Expect = 0.92
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 79 DLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFD 219
DL+ + N+V P L F T +AP R Q ++ + +++Q +F+
Sbjct: 250 DLQDMYQNLVLLPELQFLHTSYAPFIQRDQQNSSSVNLLQISQALFN 296
>UniRef50_P53378 Cluster: Tubulin gamma chain; n=5;
Saccharomycetales|Rep: Tubulin gamma chain -
Saccharomyces cerevisiae (Baker's yeast)
Length = 473
Score = 33.5 bits (73), Expect = 0.92
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTS 159
+RFP + + + + ++P P LHF F P TS
Sbjct: 242 IRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTS 277
>UniRef50_P54401 Cluster: Tubulin gamma chain; n=3; Entamoeba
histolytica|Rep: Tubulin gamma chain - Entamoeba
histolytica
Length = 451
Score = 33.5 bits (73), Expect = 0.92
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRFP L L L +++ P HF +T + PL R + ++ +++ +N+
Sbjct: 238 LRFPSTLYNSLNSLMIHLCPSRFSHFLMTSYTPLRQVNQISSRTSAI-DVMKRLIQPQNI 296
Query: 232 MA 237
MA
Sbjct: 297 MA 298
>UniRef50_Q7QW53 Cluster: GLP_457_13116_11626; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_457_13116_11626 - Giardia lamblia
ATCC 50803
Length = 496
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -1
Query: 234 HHVLSVEHLLRQLGDGERAVLLTAARREGSKTSNKKVQTWEWHHVHCQLTEIGIQLTGKP 55
HHV +E + +LGDGE V+ R +G + ++V V +L ++ ++ +
Sbjct: 178 HHVRRLEDGVGELGDGELLVVRLLGRDDGRVRAEREVDARVRDEVRLELRQVDVEGAVEA 237
Query: 54 EAG 46
E G
Sbjct: 238 ERG 240
>UniRef50_UPI00005103F0 Cluster: COG1357: Uncharacterized
low-complexity proteins; n=1; Brevibacterium linens
BL2|Rep: COG1357: Uncharacterized low-complexity
proteins - Brevibacterium linens BL2
Length = 229
Score = 31.9 bits (69), Expect = 2.8
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 195 GDGERAVLLTAARREGSKTSNKKVQTWEWHHVHCQLTEIGIQLTGKPEAGVTPDMVSD-- 22
GD E V LT AR GS+ + + TW TEI G AGV D V +
Sbjct: 71 GDAESPVNLTGARFSGSRIEDCRADTWTMPRGSLVHTEISGTRIG---AGVVHDSVWEKV 127
Query: 21 TRSSCRI 1
S+CRI
Sbjct: 128 VLSNCRI 134
>UniRef50_UPI00006CA67A Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 452
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRG-SQQYRALTVPELTQQMFDAKN 228
+RF G LN ++ L N+V +PR++ I + ++ TV L +F+ +N
Sbjct: 239 MRFKGDLNYNMANLVTNLVCYPRINNTIPSYCSSNFNFIKEKCGQPTVNMLCSSLFNKQN 298
Query: 229 MMAACD 246
C+
Sbjct: 299 FFVDCN 304
>UniRef50_Q3JBW6 Cluster: Putative uncharacterized protein
precursor; n=1; Nitrosococcus oceani ATCC 19707|Rep:
Putative uncharacterized protein precursor -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 130
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -1
Query: 189 GERAVLLTAARREGSKTSNKKVQTWEWH 106
G A+ +TA +++G K SNK+V TW++H
Sbjct: 37 GTWALEMTAPKKDG-KNSNKEVSTWDFH 63
>UniRef50_A4I4R5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania infantum
Length = 1287
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 162 ARREGSKTSNKKVQTWEWHHVHCQLTE---IGIQLTGKPEAGVTPDMVSDTRSS 10
+R+ SK + ++VQ W H H Q + +G + G EAG P V DT +S
Sbjct: 1199 SRKRPSKNAQREVQQWPGPHAHQQQQQPSILGEYILGHVEAGQRPP-VFDTAAS 1251
>UniRef50_A2QHU0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 84
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -1
Query: 246 VTRRHHVLSVEHLLRQLGDGERAVLLTAARREGSKTSNKKVQTWEWHHVHCQLTEIGIQL 67
V R H+ + +L+ D E ARR+ K S + HHVH + QL
Sbjct: 20 VWRTEHITGIINLVHAQQDSESQKYTCDARRKQRKLSEDVTFVFSEHHVHDAYDSVSGQL 79
Query: 66 T 64
T
Sbjct: 80 T 80
>UniRef50_UPI0000F21875 Cluster: PREDICTED: similar to ankyrin 3; n=5;
Danio rerio|Rep: PREDICTED: similar to ankyrin 3 - Danio
rerio
Length = 4166
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 123 QTWEWHHVHCQLTEIGIQLTGKPEAGVTPDMVSDTRSSCRI 1
+TW+ HH C++TE+ L G E +P + R CRI
Sbjct: 1086 ETWKEHHYDCKVTELTSILNGMDEEMDSPAELEKKR-ICRI 1125
>UniRef50_UPI0000E2189B Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 353
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = -1
Query: 243 TRRHHVLSVEHLLRQLGDGERAVLLTAARREGSKTSNKKVQTWEWHHVHCQLTEIGIQLT 64
+R + S EHL + R+ T RE + S+++ HH+H Q + L
Sbjct: 101 SRSTSITSREHLHTSITITSRSTSFTITSRESTSISSRE----HLHHLHLQGAPPSLSLP 156
Query: 63 GKPEAGVTPDMVSDTRSS 10
G P + P S T +S
Sbjct: 157 GAPPSPSPPGSTSFTVTS 174
>UniRef50_A0L418 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 481
Score = 30.3 bits (65), Expect = 8.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 156 REGSKTSNKKVQTWEWHHVHCQLTEIGIQL 67
+E + + QTW+WH QL ++G+ L
Sbjct: 438 KESRRQARAAGQTWDWHTAQQQLAKLGVHL 467
>UniRef50_Q9T3Y9 Cluster: Putative uncharacterized protein; n=1;
Nephroselmis olivacea|Rep: Putative uncharacterized
protein - Nephroselmis olivacea
Length = 245
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 67 QLNADLRKLAVNMVPF-PRLHFFITGFAPLTSRGSQQYRALTVPELTQQMF 216
Q NA ++A ++P P L FF++ ++ GS YRALT LT +F
Sbjct: 161 QFNAKGMRVAFPLIPGRPALKFFVSYWSFSFILGSLVYRALTKTGLTSALF 211
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,645,213
Number of Sequences: 1657284
Number of extensions: 3877894
Number of successful extensions: 10951
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 10781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10947
length of database: 575,637,011
effective HSP length: 60
effective length of database: 476,199,971
effective search space used: 10000199391
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -