Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J11
(246 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 130 1e-31
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 129 3e-31
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 128 7e-31
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 128 7e-31
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 128 7e-31
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 126 2e-30
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 126 2e-30
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 123 1e-29
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 122 3e-29
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 73 2e-14
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 73 4e-14
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 73 4e-14
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 66 3e-12
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 66 3e-12
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 66 3e-12
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 66 3e-12
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 57 1e-09
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 57 1e-09
At5g53580.1 68418.m06657 aldo/keto reductase family protein cont... 29 0.57
At2g40370.1 68415.m04978 laccase, putative / diphenol oxidase, p... 28 0.99
At1g66580.1 68414.m07565 60S ribosomal protein L10 (RPL10C) cont... 28 0.99
At2g30210.1 68415.m03674 laccase, putative / diphenol oxidase, p... 27 1.7
At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein co... 26 3.0
At4g24265.1 68417.m03482 expressed protein 26 3.0
At5g17820.1 68418.m02089 peroxidase 57 (PER57) (P57) (PRXR10) id... 26 4.0
At5g07130.1 68418.m00813 laccase, putative / diphenol oxidase, p... 26 4.0
At5g05390.1 68418.m00581 laccase, putative / diphenol oxidase, p... 26 4.0
At1g26910.1 68414.m03281 60S ribosomal protein L10 (RPL10B) Near... 26 4.0
At1g14320.1 68414.m01697 60S ribosomal protein L10 (RPL10A) / Wi... 26 4.0
At5g19660.1 68418.m02339 subtilase family protein contains Pfam ... 25 5.3
At4g02130.2 68417.m00285 glycosyl transferase family 8 protein l... 25 5.3
At4g02130.1 68417.m00284 glycosyl transferase family 8 protein l... 25 5.3
At1g66670.1 68414.m07577 ATP-dependent Clp protease proteolytic ... 25 5.3
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to... 25 5.3
At2g23820.2 68415.m02846 metal-dependent phosphohydrolase HD dom... 25 9.2
At2g23820.1 68415.m02845 metal-dependent phosphohydrolase HD dom... 25 9.2
At2g14530.1 68415.m01626 expressed protein 25 9.2
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 130 bits (314), Expect = 1e-31
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 229 MMAACD 246
MM A D
Sbjct: 299 MMCAAD 304
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 129 bits (311), Expect = 3e-31
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+D+KN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
Query: 229 MMAACD 246
MM A D
Sbjct: 299 MMCAAD 304
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 128 bits (308), Expect = 7e-31
Identities = 56/66 (84%), Positives = 63/66 (95%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR+LTVPELTQQM+D+KN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKN 298
Query: 229 MMAACD 246
MM A D
Sbjct: 299 MMCAAD 304
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 128 bits (308), Expect = 7e-31
Identities = 56/66 (84%), Positives = 63/66 (95%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR+LTVPELTQQM+D+KN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKN 298
Query: 229 MMAACD 246
MM A D
Sbjct: 299 MMCAAD 304
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 128 bits (308), Expect = 7e-31
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR LTVPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKN 298
Query: 229 MMAACD 246
MM A D
Sbjct: 299 MMCAAD 304
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 126 bits (304), Expect = 2e-30
Identities = 56/66 (84%), Positives = 62/66 (93%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY AL+VPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKN 298
Query: 229 MMAACD 246
MM A D
Sbjct: 299 MMCAAD 304
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 126 bits (304), Expect = 2e-30
Identities = 56/66 (84%), Positives = 62/66 (93%)
Frame = +1
Query: 49 CLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKN 228
CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY AL+VPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKN 298
Query: 229 MMAACD 246
MM A D
Sbjct: 299 MMCAAD 304
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 123 bits (297), Expect = 1e-29
Identities = 57/68 (83%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +1
Query: 46 TC-LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDA 222
TC LRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY +LTVPELTQQM+DA
Sbjct: 238 TCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDA 297
Query: 223 KNMMAACD 246
KNMM A D
Sbjct: 298 KNMMCAAD 305
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 122 bits (294), Expect = 3e-29
Identities = 56/68 (82%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +1
Query: 46 TC-LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDA 222
TC LRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY +LTVPELTQQM+D+
Sbjct: 238 TCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDS 297
Query: 223 KNMMAACD 246
KNMM A D
Sbjct: 298 KNMMCAAD 305
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 73.3 bits (172), Expect = 2e-14
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
T LRF G +N D+ + N+VP+PR+HF ++ +AP+ S + +VPE+T +F+
Sbjct: 240 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPS 299
Query: 226 NMMAACD 246
NMMA CD
Sbjct: 300 NMMAKCD 306
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 72.5 bits (170), Expect = 4e-14
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
T LRF G +N D+ + N+VP+PR+HF ++ +AP+ S + L+VPE+T +F+
Sbjct: 240 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPA 299
Query: 226 NMMAACD 246
+MMA CD
Sbjct: 300 SMMAKCD 306
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 72.5 bits (170), Expect = 4e-14
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAK 225
T LRF G +N D+ + N+VP+PR+HF ++ +AP+ S + L+VPE+T +F+
Sbjct: 240 TSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPA 299
Query: 226 NMMAACD 246
+MMA CD
Sbjct: 300 SMMAKCD 306
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 66.1 bits (154), Expect = 3e-12
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +M
Sbjct: 242 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASM 301
Query: 232 MAACD 246
MA CD
Sbjct: 302 MAKCD 306
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 66.1 bits (154), Expect = 3e-12
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +M
Sbjct: 242 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASM 301
Query: 232 MAACD 246
MA CD
Sbjct: 302 MAKCD 306
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 66.1 bits (154), Expect = 3e-12
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +M
Sbjct: 242 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASM 301
Query: 232 MAACD 246
MA CD
Sbjct: 302 MAKCD 306
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 66.1 bits (154), Expect = 3e-12
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 52 LRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 231
LRF G LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +M
Sbjct: 242 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASM 301
Query: 232 MAACD 246
MA CD
Sbjct: 302 MAKCD 306
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 57.2 bits (132), Expect = 1e-09
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLT-SRGSQQYRALTVPELTQQMFDA 222
T LR+PG +N DL L +++P PR HF +TG+ PLT R + R TV ++ +++
Sbjct: 241 TTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQT 300
Query: 223 KNMMAA 240
KN+M +
Sbjct: 301 KNIMVS 306
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 57.2 bits (132), Expect = 1e-09
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 46 TCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPLT-SRGSQQYRALTVPELTQQMFDA 222
T LR+PG +N DL L +++P PR HF +TG+ PLT R + R TV ++ +++
Sbjct: 241 TTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQT 300
Query: 223 KNMMAA 240
KN+M +
Sbjct: 301 KNIMVS 306
>At5g53580.1 68418.m06657 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 365
Score = 28.7 bits (61), Expect = 0.57
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 25 ADHVWRYTCLRFPGQLNADLRKLAVNMVPFPRLHFFITGFAPL 153
A + WR T +F A L +L ++ + +LH+ +APL
Sbjct: 131 AAYPWRLTSGQFVNACRASLDRLQIDQLGIGQLHWSTASYAPL 173
>At2g40370.1 68415.m04978 laccase, putative / diphenol oxidase,
putative similar to laccase [Populus balsamifera subsp.
trichocarpa][GI:3805960]
Length = 580
Score = 27.9 bits (59), Expect = 0.99
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 131 KKCRRGNGTMFTASLRRSAFN*PGN 57
++C+ NGT FTAS+ +F P N
Sbjct: 386 RRCQGPNGTRFTASMNNVSFALPSN 410
>At1g66580.1 68414.m07565 60S ribosomal protein L10 (RPL10C)
contains Pfam profile: PF00826: Ribosomal L10
Length = 221
Score = 27.9 bits (59), Expect = 0.99
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 128 KCRRGNGTMFTASLRRSAFN*PGNLRQV*RQTWSATPGPRAE 3
+C+ +G +LRR+ F PG + + + W T RAE
Sbjct: 139 RCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180
>At2g30210.1 68415.m03674 laccase, putative / diphenol oxidase,
putative similar to laccase [Populus balsamifera subsp.
trichocarpa][GI:3805960]
Length = 570
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 146 AKPVIKKCRRGNGTMFTASLRRSAFN*PGNLRQV*RQTWSATPG 15
A P +C+ NGT F AS+ +F P + V + + TPG
Sbjct: 372 ANPNSPRCQGPNGTRFAASMNNMSFVLPRS-NSVMQAYYQGTPG 414
>At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit
Length = 638
Score = 26.2 bits (55), Expect = 3.0
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 67 QLNADLRKLAVNMVPFPRLHFFITGFAPLTSRGS--QQYRALTVPELTQ---QMFDAKNM 231
+L LR LAV V P F+ F PL G Q+Y T +L + ++F+ K+M
Sbjct: 575 ELRESLR-LAVAEVLLPAYRSFLKRFGPLVESGKNPQKYIKYTAEDLERLLGELFEGKSM 633
>At4g24265.1 68417.m03482 expressed protein
Length = 140
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 144 KTSNKKVQTWEWHHVHCQLTEIGIQLTGKPEAGVTPDMVSDTRSSC 7
K K+ + HH C+ + + + +P A P +TRS C
Sbjct: 11 KRKRKQACPSQPHHCSCEYSSTAVAVLVEPTAPPLPYWFDETRSLC 56
>At5g17820.1 68418.m02089 peroxidase 57 (PER57) (P57) (PRXR10)
identical to SP|Q43729 Peroxidase 57 precursor (EC
1.11.1.7) (Atperox P57) (PRXR10) (ATP13a) {Arabidopsis
thaliana}
Length = 313
Score = 25.8 bits (54), Expect = 4.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 72 QLTGKPEAGVTPDMVSDTRSSCR 4
Q TG+P+ + P +V+ R++CR
Sbjct: 203 QGTGRPDPSMDPALVTSLRNTCR 225
>At5g07130.1 68418.m00813 laccase, putative / diphenol oxidase,
putative similar to laccase [Populus balsamifera subsp.
trichocarpa][GI:3805960]
Length = 484
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 140 PVIKKCRRGNGTMFTASLRRSAF 72
P ++C+ NGT FTAS+ +F
Sbjct: 287 PNTQRCQGPNGTRFTASINNVSF 309
>At5g05390.1 68418.m00581 laccase, putative / diphenol oxidase,
putative similar to laccase [Populus balsamifera subsp.
trichocarpa][GI:3805960]
Length = 565
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 128 KCRRGNGTMFTASLRRSAFN*PGN 57
+C+ NGT FTAS+ +F P N
Sbjct: 372 RCQGLNGTRFTASMNNVSFVLPSN 395
>At1g26910.1 68414.m03281 60S ribosomal protein L10 (RPL10B) Nearly
identical to ribosomal protein L10.e, Wilm's tumor
suppressor homologue, gi|17682 (Z15157), however
differences in sequence indicate this is a different
member of the L10 family
Length = 221
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 128 KCRRGNGTMFTASLRRSAFN*PGNLRQV*RQTWSATPGPRAE 3
+C+ +G +LRR+ F PG + + + W T RA+
Sbjct: 139 RCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180
>At1g14320.1 68414.m01697 60S ribosomal protein L10 (RPL10A) /
Wilm's tumor suppressor protein-related similar to tumor
suppressor GI:575354 from [Oryza sativa]
Length = 220
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 128 KCRRGNGTMFTASLRRSAFN*PGNLRQV*RQTWSATPGPRAE 3
+C+ +G +LRR+ F PG + + + W T RA+
Sbjct: 139 RCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180
>At5g19660.1 68418.m02339 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 1038
Score = 25.4 bits (53), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -1
Query: 117 WEWHH---VHCQLTEIGIQLTGKPEAGVTPDMVSDTRS 13
W W +H Q+ E G Q TG+ E VT + S S
Sbjct: 553 WPWTGYLALHMQIKEEGAQFTGEIEGNVTVKVYSPPAS 590
>At4g02130.2 68417.m00285 glycosyl transferase family 8 protein low
similarity to lgtC of Neisseria sp., GenBank accession
number U14554, U65788; contains Pfam glycosyl
transferase family 8 domain PF01501
Length = 346
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 112 FPRLHFFITGFAPLTSRG 165
FPRL F I FAP T RG
Sbjct: 119 FPRLKFNIYDFAPETVRG 136
>At4g02130.1 68417.m00284 glycosyl transferase family 8 protein low
similarity to lgtC of Neisseria sp., GenBank accession
number U14554, U65788; contains Pfam glycosyl
transferase family 8 domain PF01501
Length = 346
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 112 FPRLHFFITGFAPLTSRG 165
FPRL F I FAP T RG
Sbjct: 119 FPRLKFNIYDFAPETVRG 136
>At1g66670.1 68414.m07577 ATP-dependent Clp protease proteolytic
subunit (ClpP3) identical to ATP-dependent Clp protease
(nClpP3) GI:5360591 [Arabidopsis thaliana]
Length = 309
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 150 GSKTSNKKVQTWEWHHVHCQLTEIGIQLTGKPEAGVTPDMVSD 22
G K + ++ E + +L +I ++TGKPE+ + D D
Sbjct: 196 GGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRD 238
>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1311
Score = 25.4 bits (53), Expect = 5.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 106 VPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQ 207
V F R GF PL+SR +Q ++L VP +Q
Sbjct: 581 VTFKRSRNLAFGFVPLSSRSKRQ-KSLEVPTQSQ 613
>At2g23820.2 68415.m02846 metal-dependent phosphohydrolase HD
domain-containing protein contains Pfam profile PF01966:
HD domain
Length = 257
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 222 SVEHLLRQLGDGERAVLLTAARREGSKTSNKKVQ 121
++EH+ + LG GERA + RE + S+ + +
Sbjct: 168 ALEHMCKLLGGGERAKEIAELWREYEENSSPEAK 201
>At2g23820.1 68415.m02845 metal-dependent phosphohydrolase HD
domain-containing protein contains Pfam profile PF01966:
HD domain
Length = 245
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 222 SVEHLLRQLGDGERAVLLTAARREGSKTSNKKVQ 121
++EH+ + LG GERA + RE + S+ + +
Sbjct: 168 ALEHMCKLLGGGERAKEIAELWREYEENSSPEAK 201
>At2g14530.1 68415.m01626 expressed protein
Length = 412
Score = 24.6 bits (51), Expect = 9.2
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -1
Query: 147 SKTSNKKVQTWEWHHVHCQL 88
+KT+ ++ W W HC L
Sbjct: 97 NKTNGFEISNWRWKPKHCDL 116
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,092,739
Number of Sequences: 28952
Number of extensions: 83582
Number of successful extensions: 230
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 12,070,560
effective HSP length: 60
effective length of database: 10,333,440
effective search space used: 217002240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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