Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J10
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.0  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         22   8.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   8.0  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = +2

Query: 5    RATSGRRYAFPVDSRCIXXXXXXXXXXXXTA--RSAGG--DCTT 124
            +AT GR++ + V S C+            T+  R AG   +CT+
Sbjct: 1300 KATDGRQHEYAVPSNCLLDTTHETYNTTATSCERIAGETFECTS 1343


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 239 RYIGRVRALPEAYISIYK*STRGAAPRRHCTAHLNN 346
           R +  +R L E+Y+ I   +TR   P+      +NN
Sbjct: 96  RQVETIRNLVESYMRIVTKTTRDMVPKAIMMLIINN 131


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = -3

Query: 368  RVTNCGEHCSSARCSDVAEQRRG*IIYRLKCRLQVEREHGQ 246
            R   CGE  S    S    +RR  I  R+    Q  R+H Q
Sbjct: 1066 REEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQ 1106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,669
Number of Sequences: 2352
Number of extensions: 6625
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)