Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J09
(400 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16FZ7 Cluster: Ssm4 protein; n=3; Endopterygota|Rep: S... 84 1e-15
UniRef50_O60337 Cluster: E3 ubiquitin-protein ligase MARCH6; n=3... 64 1e-09
UniRef50_Q4SVD6 Cluster: Chromosome undetermined SCAF13763, whol... 62 4e-09
UniRef50_Q9W023 Cluster: CG1317-PB; n=4; Sophophora|Rep: CG1317-... 54 8e-07
UniRef50_UPI0000660E0C Cluster: E3 ubiquitin-protein ligase MARC... 44 0.001
UniRef50_Q400N4 Cluster: Putative uncharacterized protein; n=3; ... 40 0.014
UniRef50_O76617 Cluster: Putative uncharacterized protein; n=1; ... 38 0.096
UniRef50_Q839C3 Cluster: N-acetylmuramoyl-L-alanine amidase, fam... 35 0.51
UniRef50_P54817 Cluster: Capsid protein P40 [Contains: Assemblin... 33 2.1
UniRef50_A5NX66 Cluster: Glycosyl transferase, WecB/TagA/CpsF fa... 32 3.6
UniRef50_A3MGG1 Cluster: SciB protein; n=32; Proteobacteria|Rep:... 32 3.6
UniRef50_A3X998 Cluster: Putative uncharacterized protein; n=1; ... 32 4.8
UniRef50_A5NYI8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 31 6.3
UniRef50_Q4J460 Cluster: Putative uncharacterized protein precur... 31 8.3
UniRef50_Q6ERR8 Cluster: Putative uncharacterized protein P0701F... 31 8.3
UniRef50_A4IBB9 Cluster: ATP-dependent RNA helicase-like protein... 31 8.3
UniRef50_A6RGC0 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 8.3
UniRef50_P10227 Cluster: Membrane protein UL43; n=3; Simplexviru... 31 8.3
UniRef50_Q93424 Cluster: Putative uncharacterized protein grl-23... 26 9.2
>UniRef50_Q16FZ7 Cluster: Ssm4 protein; n=3; Endopterygota|Rep: Ssm4
protein - Aedes aegypti (Yellowfever mosquito)
Length = 760
Score = 83.8 bits (198), Expect = 1e-15
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Frame = +3
Query: 105 QSHTRTWLKAGVRAWCACAAGVLGLRSYLLGEAARQTEANPPPHPPQQLG----AAHQAL 272
QSHTR WLK VR WC A +LG++SYLLG R + PP LG AAHQA+
Sbjct: 364 QSHTRIWLKGLVRIWCNVVARILGIKSYLLGTEPRPNDDEVPPRQQPDLGAGLAAAHQAI 423
Query: 273 MRRDGPAGFEPYTRVSWF 326
M+RD P GF+PY R +F
Sbjct: 424 MQRDVPVGFQPYDRPPFF 441
>UniRef50_O60337 Cluster: E3 ubiquitin-protein ligase MARCH6; n=38;
Eumetazoa|Rep: E3 ubiquitin-protein ligase MARCH6 - Homo
sapiens (Human)
Length = 910
Score = 63.7 bits (148), Expect = 1e-09
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Frame = +3
Query: 21 VAVHTEAPVNXXXXXXXXXXXXXXXXXXQSHTRTWLKAGVRAWCACAAGVLGLRSYLLGE 200
V ++++APV+ Q HTR WLK VRAW A +L L SYLLG+
Sbjct: 514 VMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGD 573
Query: 201 ------AARQ--------TEANPPPHPPQQLGAAHQALMRRDGPAGFEPYTRVSWFP 329
+A Q N P + L AAHQA++++ GP GF+PY R FP
Sbjct: 574 QEENENSANQQVNNNQHARNNNAIPVVGEGLHAAHQAILQQGGPVGFQPYRRPLNFP 630
>UniRef50_Q4SVD6 Cluster: Chromosome undetermined SCAF13763, whole
genome shotgun sequence; n=6; Euteleostomi|Rep:
Chromosome undetermined SCAF13763, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1441
Score = 62.1 bits (144), Expect = 4e-09
Identities = 42/113 (37%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Frame = +3
Query: 21 VAVHTEAPVNXXXXXXXXXXXXXXXXXXQSHTRTWLKAGVRAWCACAAGVLGLRSYLLGE 200
V ++++APV+ Q HTR WLK V AW A VL L SYLLGE
Sbjct: 605 VMLYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKKLVHAWTFTAGYVLDLHSYLLGE 664
Query: 201 AARQ----------TEANPPPHPPQQLGAAHQALMRRDGPAGFEPYTRVSWFP 329
N P + L AAHQAL+R+ GP G PY R FP
Sbjct: 665 HEDHHNQINNNLAGRHNNRFPGVGEGLHAAHQALLRQAGPVGVRPYHRPVHFP 717
>UniRef50_Q9W023 Cluster: CG1317-PB; n=4; Sophophora|Rep: CG1317-PB
- Drosophila melanogaster (Fruit fly)
Length = 988
Score = 54.4 bits (125), Expect = 8e-07
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 39/113 (34%)
Frame = +3
Query: 105 QSHTRTWLKAGVRAWCACAAGVLGLRSYLL------------GE-----AARQTE----- 218
Q+ TR WLK +R WC A +LG+RSYLL GE AA + E
Sbjct: 528 QTQTRIWLKGLLRIWCTAVAWLLGIRSYLLPAPEPEPEIPAAGEEGVENAAGENENQEGE 587
Query: 219 -----ANPPPHPP------------QQLGAAHQALMRRDGPAGFEPYTRVSWF 326
A PP PP + L AAHQA+M+RD P GF+PY + S F
Sbjct: 588 AADAAAQPPAPPPPPPPPVEPAPAPRNLAAAHQAIMQRDAPVGFQPYDKPSLF 640
>UniRef50_UPI0000660E0C Cluster: E3 ubiquitin-protein ligase MARCH6
(EC 6.3.2.-) (Membrane-associated RING finger protein 6)
(Membrane-associated RING-CH protein VI) (MARCH-VI)
(RING finger protein 176) (Protein TEB-4) (Doa10
homolog).; n=1; Takifugu rubripes|Rep: E3
ubiquitin-protein ligase MARCH6 (EC 6.3.2.-)
(Membrane-associated RING finger protein 6)
(Membrane-associated RING-CH protein VI) (MARCH-VI)
(RING finger protein 176) (Protein TEB-4) (Doa10
homolog). - Takifugu rubripes
Length = 1194
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +3
Query: 21 VAVHTEAPVNXXXXXXXXXXXXXXXXXXQSHTRTWLKAGVRAWCACAAGVLGLRSYLLGE 200
V ++++APV+ Q HTR WLK V AW A VL L SYLLG+
Sbjct: 393 VMLYSDAPVSELSVELLLLQVVLPALLEQGHTRQWLKKLVHAWTFTAGYVLDLHSYLLGD 452
>UniRef50_Q400N4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 958
Score = 40.3 bits (90), Expect = 0.014
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Frame = +3
Query: 21 VAVHTEAPVNXXXXXXXXXXXXXXXXXXQSHTRTWLKAGVRAWCACAAGVLGLRSYLLGE 200
V++ E P++ ++ R ++K GVR WC L L YLL +
Sbjct: 641 VSMSAETPLSEISLELLILQVVMPAILEHANGRGFIKYGVRFWCKVVGAALDLDQYLLSD 700
Query: 201 AARQTEAN------PPPHPPQQLG----AAHQALMRRDGPAGFEPYTRVSWF 326
+ N P Q G A HQAL+ P +EPY R S F
Sbjct: 701 NNNNNQNNNNNNNDPLRAGNNQAGGGLAAEHQALLLLREPRAYEPYNRPSLF 752
>UniRef50_O76617 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 197
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 211 KLKRIHPHIPPNSSGPPIRL*CVVTVQPVSNLT 309
+L I P IPP SSGPP+RL T QP++ T
Sbjct: 27 RLPIIRPKIPPKSSGPPVRLITSATPQPIAPST 59
>UniRef50_Q839C3 Cluster: N-acetylmuramoyl-L-alanine amidase, family
4; n=1; Enterococcus faecalis|Rep:
N-acetylmuramoyl-L-alanine amidase, family 4 -
Enterococcus faecalis (Streptococcus faecalis)
Length = 503
Score = 35.1 bits (77), Expect = 0.51
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 283 TVQPVSNLTPAYRGSRYDWARSFSWYQCRWY 375
TV+P+ + PAY G YD S++W C Y
Sbjct: 368 TVEPMESNFPAYNGKNYDTFNSYAWGNCTQY 398
>UniRef50_P54817 Cluster: Capsid protein P40 [Contains: Assemblin
(Protease) (EC 3.4.21.97); Capsid assembly protein];
n=6; Varicellovirus|Rep: Capsid protein P40 [Contains:
Assemblin (Protease) (EC 3.4.21.97); Capsid assembly
protein] - Bovine herpesvirus 1.1 (strain Cooper)
(BoHV-1) (Infectious bovinerhinotracheitis virus)
Length = 621
Score = 33.1 bits (72), Expect = 2.1
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 141 RAWCACAAGVLGLRSYLLGEAARQTE---ANPPPHPPQQLGAAHQA 269
RA + AG + + + G ARQ E A PPP PP + AAHQA
Sbjct: 275 RAQKSAVAGGVCIALPVAGGRARQPELPPAPPPPPPPPAMSAAHQA 320
>UniRef50_A5NX66 Cluster: Glycosyl transferase, WecB/TagA/CpsF
family; n=1; Methylobacterium sp. 4-46|Rep: Glycosyl
transferase, WecB/TagA/CpsF family - Methylobacterium
sp. 4-46
Length = 463
Score = 32.3 bits (70), Expect = 3.6
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +3
Query: 126 LKAGVRAWCACAAGVLGLRSYLLGEAARQTEANPPPHPPQQ------LGAAHQALMRRDG 287
L+AG+RA A A LR R A PP PP + LGA H A +RR G
Sbjct: 119 LRAGLRAGAAPARFRTRLRRQPRAAGLRARGAPPPRRPPGRRAPPLRLGARHPAGLRRPG 178
Query: 288 P 290
P
Sbjct: 179 P 179
>UniRef50_A3MGG1 Cluster: SciB protein; n=32; Proteobacteria|Rep:
SciB protein - Burkholderia mallei (strain NCTC 10247)
Length = 361
Score = 32.3 bits (70), Expect = 3.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 269 SLMGGPELLGGMWGWIRFSLSRRLAEQVRTQPEH 168
++MGGP LG WGW+ S S +R +PEH
Sbjct: 309 AVMGGPHQLG-WWGWLGRSPSGEPVTGMRFEPEH 341
>UniRef50_A3X998 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 282
Score = 31.9 bits (69), Expect = 4.8
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 126 LKAGVRAWCAC-AAGVLGLRSYLLGEAARQTEANPPPHPPQQLGAAHQALMRR 281
++ G R +CA A G+LG RSY L A R P H L A L R
Sbjct: 182 IRKGARGYCAFDAKGLLGERSYELANALRHPHGLKPSHGKVDLLAQRAQLWGR 234
>UniRef50_A5NYI8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 382
Score = 31.5 bits (68), Expect = 6.3
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2
Query: 251 RGRPSGSNAS*RSSRFRTLHPRIVVPVTIGRAPSPGISVVGTGQRVNP 394
R RP G+ A R+SR PRI P IGR+ SPG S G G+R P
Sbjct: 5 RPRPRGT-AGGRASR----SPRI--PAPIGRSNSPGPSTRGCGERTPP 45
>UniRef50_Q4J460 Cluster: Putative uncharacterized protein
precursor; n=1; Azotobacter vinelandii AvOP|Rep:
Putative uncharacterized protein precursor - Azotobacter
vinelandii AvOP
Length = 850
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 304 GSKPAGPSRRIRA*WAAPSCWGGCGGGFASVCLAASPSRYERNPSTP 164
G P + + A W AP W C G +V A+PSR P +P
Sbjct: 759 GRSPMAWAATVAASWPAPWRWKPCTGWSPAVRTCAAPSRAPMPPFSP 805
>UniRef50_Q6ERR8 Cluster: Putative uncharacterized protein
P0701F11.17; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0701F11.17 - Oryza sativa subsp. japonica (Rice)
Length = 172
Score = 31.1 bits (67), Expect = 8.3
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -1
Query: 355 RRRSAPNRNGNHDTRV*GSKPAGPSRRIRA*WAAPSCWGGCGGGFASVCLAASPSR 188
RRR R G H T + P A WAA + W GGG + L + P+R
Sbjct: 53 RRRKGEERRG-HPTPLRRPSLLSPGHCSSASWAAWTSWTVAGGGVCAPLLLSPPAR 107
>UniRef50_A4IBB9 Cluster: ATP-dependent RNA helicase-like protein;
n=4; cellular organisms|Rep: ATP-dependent RNA
helicase-like protein - Leishmania infantum
Length = 1509
Score = 31.1 bits (67), Expect = 8.3
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 225 PPPHPPQQLGAAHQALMRRDGPAGFEPYTRVS 320
PPP PP LG H + R GP F P T S
Sbjct: 60 PPPPPPSSLG--HAPMPRPSGPLVFPPSTHTS 89
>UniRef50_A6RGC0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 349
Score = 31.1 bits (67), Expect = 8.3
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 177 LRSYLLGEAARQTEANPPPHPPQQLGAA--HQALMRR 281
LR +LG A P PHPPQ +GAA Q+L+ R
Sbjct: 128 LRERVLGLPPMAAAAAPSPHPPQAVGAAGFAQSLLSR 164
>UniRef50_P10227 Cluster: Membrane protein UL43; n=3;
Simplexvirus|Rep: Membrane protein UL43 - Human
herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex
virus1)
Length = 434
Score = 31.1 bits (67), Expect = 8.3
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 132 AGVRAWCACAAGVLGLRSYLLGEAARQTEANPPPHPPQQ---LGAAHQALM 275
A + AW AAG L + LGE Q A P P P Q LGAA+ AL+
Sbjct: 105 ARIYAWLKLAAGGAALVLWSLGEPGTQPGA-PAPGPATQCLALGAAYAALL 154
>UniRef50_Q93424 Cluster: Putative uncharacterized protein grl-23;
n=5; Bilateria|Rep: Putative uncharacterized protein
grl-23 - Caenorhabditis elegans
Length = 385
Score = 25.8 bits (54), Expect(2) = 9.2
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 253 PSCWGGCGGG 224
P+C GGCGGG
Sbjct: 116 PACGGGCGGG 125
Score = 23.8 bits (49), Expect(2) = 9.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 247 CWGGCGGGFASVC 209
C GGCGGG C
Sbjct: 129 CGGGCGGGGGGGC 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,467,823
Number of Sequences: 1657284
Number of extensions: 8601999
Number of successful extensions: 35443
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 33145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35303
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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