Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J09
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.64 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   1.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   1.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.64
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 226  HPHIPPNSSGPPI 264
            HP IPP S  PP+
Sbjct: 1375 HPPIPPTSEKPPL 1387


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 364 TDTRRRSAPNRNGNHDTRV*GSKPAGPSRR 275
           TD +RR+ P R   +  R   ++PA P+ R
Sbjct: 321 TDHQRRNEPKRPRPNIDRHEVTRPAAPANR 350


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 178 CVRTCSARRRDKLK 219
           C+RTCS+ +R K +
Sbjct: 192 CLRTCSSAKRPKFE 205


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 177 LRSYLLGEAARQTEANPPPHPPQQ 248
           L+S L    A   +  PPPHP  Q
Sbjct: 721 LQSPLTPHEAFDVKLPPPPHPHHQ 744


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 177 LRSYLLGEAARQTEANPPPHPPQQ 248
           L+S L    A   +  PPPHP  Q
Sbjct: 613 LQSPLTPHEAFDVKLPPPPHPHHQ 636


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 304 GSKPAGPSRRIRA*WAAPSCWGGCGGGFASVCLAASPSRY 185
           G++  G S  + A  +APS   G GG    V    S  RY
Sbjct: 246 GAQTVGASFGLHATGSAPSPTAGAGGLPPQVPSPRSQRRY 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,322
Number of Sequences: 336
Number of extensions: 1824
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)