Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J09
(400 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p pro... 54 5e-08
AY058479-1|AAL13708.1| 700|Drosophila melanogaster GH28722p pro... 54 5e-08
AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB ... 54 5e-08
BT025080-1|ABE73251.1| 597|Drosophila melanogaster IP15004p pro... 28 5.3
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 28 5.3
BT024260-1|ABC86322.1| 210|Drosophila melanogaster IP15833p pro... 27 7.0
AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro... 27 7.0
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 27 7.0
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 27 7.0
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 27 7.0
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 27 7.0
BT023819-1|AAZ86740.1| 741|Drosophila melanogaster SD06601p pro... 27 9.2
AY070562-1|AAL48033.1| 716|Drosophila melanogaster LD38760p pro... 27 9.2
AJ606680-1|CAE54809.1| 741|Drosophila melanogaster lamin B rece... 27 9.2
AE013599-3273|AAM71016.1| 716|Drosophila melanogaster CG17952-P... 27 9.2
AE013599-3272|AAF46760.2| 716|Drosophila melanogaster CG17952-P... 27 9.2
AE013599-3271|AAM71015.1| 741|Drosophila melanogaster CG17952-P... 27 9.2
>BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p
protein.
Length = 988
Score = 54.4 bits (125), Expect = 5e-08
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 39/113 (34%)
Frame = +3
Query: 105 QSHTRTWLKAGVRAWCACAAGVLGLRSYLL------------GE-----AARQTE----- 218
Q+ TR WLK +R WC A +LG+RSYLL GE AA + E
Sbjct: 528 QTQTRIWLKGLLRIWCTAVAWLLGIRSYLLPAPEPEPEIPAAGEEGVENAAGENENQEGE 587
Query: 219 -----ANPPPHPP------------QQLGAAHQALMRRDGPAGFEPYTRVSWF 326
A PP PP + L AAHQA+M+RD P GF+PY + S F
Sbjct: 588 AADAAAQPPAPPPPPPPPVEPAPAPRNLAAAHQAIMQRDAPVGFQPYDKPSLF 640
>AY058479-1|AAL13708.1| 700|Drosophila melanogaster GH28722p
protein.
Length = 700
Score = 54.4 bits (125), Expect = 5e-08
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 39/113 (34%)
Frame = +3
Query: 105 QSHTRTWLKAGVRAWCACAAGVLGLRSYLL------------GE-----AARQTE----- 218
Q+ TR WLK +R WC A +LG+RSYLL GE AA + E
Sbjct: 240 QTQTRIWLKGLLRIWCTAVAWLLGIRSYLLPAPEPEPEIPAAGEEGVENAAGENENQEGE 299
Query: 219 -----ANPPPHPP------------QQLGAAHQALMRRDGPAGFEPYTRVSWF 326
A PP PP + L AAHQA+M+RD P GF+PY + S F
Sbjct: 300 AADAAAQPPAPPPPPPPPVEPAPAPRNLAAAHQAIMQRDAPVGFQPYDKPSLF 352
>AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB
protein.
Length = 988
Score = 54.4 bits (125), Expect = 5e-08
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 39/113 (34%)
Frame = +3
Query: 105 QSHTRTWLKAGVRAWCACAAGVLGLRSYLL------------GE-----AARQTE----- 218
Q+ TR WLK +R WC A +LG+RSYLL GE AA + E
Sbjct: 528 QTQTRIWLKGLLRIWCTAVAWLLGIRSYLLPAPEPEPEIPAAGEEGVENAAGENENQEGE 587
Query: 219 -----ANPPPHPP------------QQLGAAHQALMRRDGPAGFEPYTRVSWF 326
A PP PP + L AAHQA+M+RD P GF+PY + S F
Sbjct: 588 AADAAAQPPAPPPPPPPPVEPAPAPRNLAAAHQAIMQRDAPVGFQPYDKPSLF 640
>BT025080-1|ABE73251.1| 597|Drosophila melanogaster IP15004p
protein.
Length = 597
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 133 PAYVRGARALLACSGCVRTCSARRRDKLKRIHPHIPPNSSGPP 261
PA V GA +LA SG R+ + + H H P PP
Sbjct: 254 PANVSGAGIVLAASGQQAASKTRQHVQHQHPHQHHPNEFKAPP 296
>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
protein.
Length = 2938
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 144 AWCACAAGVLGLRSYLLGEAARQTEANPPPHPPQQLGAAH 263
A A AAG L + A+ + ANP P PPQQ H
Sbjct: 2337 ATSAAAAGHLVVGGTNANNASSSSFANPQPPPPQQQQQLH 2376
>BT024260-1|ABC86322.1| 210|Drosophila melanogaster IP15833p
protein.
Length = 210
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 165 GVLG-LRSYLLGEAARQTEANPPPHPPQQLGAAHQ 266
GVLG + YL + ++ PPP P AAHQ
Sbjct: 167 GVLGPTKIYLAVQPENAVQSQPPPLTPVHQSAAHQ 201
>AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p protein.
Length = 1022
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 165 GVLG-LRSYLLGEAARQTEANPPPHPPQQLGAAHQ 266
GVLG + YL + ++ PPP P AAHQ
Sbjct: 983 GVLGPTKIYLAVQPENAVQSQPPPLTPVHQSAAHQ 1017
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 165 GVLG-LRSYLLGEAARQTEANPPPHPPQQLGAAHQ 266
GVLG + YL + ++ PPP P AAHQ
Sbjct: 2120 GVLGPTKIYLAVQPENAVQSQPPPLTPVHQSAAHQ 2154
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 165 GVLG-LRSYLLGEAARQTEANPPPHPPQQLGAAHQ 266
GVLG + YL + ++ PPP P AAHQ
Sbjct: 2120 GVLGPTKIYLAVQPENAVQSQPPPLTPVHQSAAHQ 2154
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 165 GVLG-LRSYLLGEAARQTEANPPPHPPQQLGAAHQ 266
GVLG + YL + ++ PPP P AAHQ
Sbjct: 2120 GVLGPTKIYLAVQPENAVQSQPPPLTPVHQSAAHQ 2154
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 165 GVLG-LRSYLLGEAARQTEANPPPHPPQQLGAAHQ 266
GVLG + YL + ++ PPP P AAHQ
Sbjct: 2100 GVLGPTKIYLAVQPENAVQSQPPPLTPVHQSAAHQ 2134
>BT023819-1|AAZ86740.1| 741|Drosophila melanogaster SD06601p
protein.
Length = 741
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 281 TTH*SLMGGPELLGGMWGWIR 219
T H + G LL GMWGW+R
Sbjct: 650 TIH-TYQGSRLLLSGMWGWVR 669
>AY070562-1|AAL48033.1| 716|Drosophila melanogaster LD38760p
protein.
Length = 716
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 281 TTH*SLMGGPELLGGMWGWIR 219
T H + G LL GMWGW+R
Sbjct: 625 TIH-TYQGSRLLLSGMWGWVR 644
>AJ606680-1|CAE54809.1| 741|Drosophila melanogaster lamin B
receptor protein.
Length = 741
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 281 TTH*SLMGGPELLGGMWGWIR 219
T H + G LL GMWGW+R
Sbjct: 650 TIH-TYQGSRLLLSGMWGWVR 669
>AE013599-3273|AAM71016.1| 716|Drosophila melanogaster CG17952-PB,
isoform B protein.
Length = 716
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 281 TTH*SLMGGPELLGGMWGWIR 219
T H + G LL GMWGW+R
Sbjct: 625 TIH-TYQGSRLLLSGMWGWVR 644
>AE013599-3272|AAF46760.2| 716|Drosophila melanogaster CG17952-PA,
isoform A protein.
Length = 716
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 281 TTH*SLMGGPELLGGMWGWIR 219
T H + G LL GMWGW+R
Sbjct: 625 TIH-TYQGSRLLLSGMWGWVR 644
>AE013599-3271|AAM71015.1| 741|Drosophila melanogaster CG17952-PC,
isoform C protein.
Length = 741
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 281 TTH*SLMGGPELLGGMWGWIR 219
T H + G LL GMWGW+R
Sbjct: 650 TIH-TYQGSRLLLSGMWGWVR 669
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,000,599
Number of Sequences: 53049
Number of extensions: 419468
Number of successful extensions: 1931
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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