Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J08
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029953-1|ABM92827.1|  104|Drosophila melanogaster IP17351p pro...   150   8e-37
AE014134-1388|AAF52596.2|  104|Drosophila melanogaster CG7424-PA...   150   8e-37
BT024261-1|ABC86323.1|  121|Drosophila melanogaster IP15820p pro...   133   1e-31
AY094807-1|AAM11160.1|  572|Drosophila melanogaster LD27273p pro...    33   0.11 
AE014134-270|AAF51356.2|  916|Drosophila melanogaster CG31935-PA...    33   0.11 
X83527-1|CAA58508.1|  516|Drosophila melanogaster myocyte enhanc...    29   1.8  
U19493-1|AAF06817.1|  515|Drosophila melanogaster MADS domain tr...    29   1.8  
U03292-1|AAA19957.1|  515|Drosophila melanogaster mef2 protein.        29   1.8  
AY118311-1|AAM48340.1|  473|Drosophila melanogaster GH24154p pro...    29   1.8  
AY061096-1|AAL28644.1|  487|Drosophila melanogaster LD08608p pro...    29   1.8  
AE013599-974|AAM71044.1|  540|Drosophila melanogaster CG1429-PD,...    29   1.8  
AE013599-973|AAM71043.1|  515|Drosophila melanogaster CG1429-PC,...    29   1.8  
AE013599-972|AAF58872.1|  516|Drosophila melanogaster CG1429-PA,...    29   1.8  
AE013599-971|AAM71042.1|  509|Drosophila melanogaster CG1429-PB,...    29   1.8  
AE013599-970|AAS64881.1|  501|Drosophila melanogaster CG1429-PF,...    29   1.8  
U07422-1|AAA20463.1|  515|Drosophila melanogaster myocyte-specif...    29   3.1  

>BT029953-1|ABM92827.1|  104|Drosophila melanogaster IP17351p
           protein.
          Length = 104

 Score =  150 bits (363), Expect = 8e-37
 Identities = 70/104 (67%), Positives = 76/104 (73%)
 Frame = +1

Query: 49  MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 228
           MVNVPKQRRT+            +QYKKSKER  AQGRRRYDRKQQG+GGQ+KPIF    
Sbjct: 1   MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKA 60

Query: 229 XXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 360
                IVLR+EC +CK R Q  LKRCKHFELGGDKKRKGQMIQF
Sbjct: 61  KTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQF 104


>AE014134-1388|AAF52596.2|  104|Drosophila melanogaster CG7424-PA
           protein.
          Length = 104

 Score =  150 bits (363), Expect = 8e-37
 Identities = 70/104 (67%), Positives = 76/104 (73%)
 Frame = +1

Query: 49  MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 228
           MVNVPKQRRT+            +QYKKSKER  AQGRRRYDRKQQG+GGQ+KPIF    
Sbjct: 1   MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKA 60

Query: 229 XXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 360
                IVLR+EC +CK R Q  LKRCKHFELGGDKKRKGQMIQF
Sbjct: 61  KTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQF 104


>BT024261-1|ABC86323.1|  121|Drosophila melanogaster IP15820p
           protein.
          Length = 121

 Score =  133 bits (321), Expect = 1e-31
 Identities = 60/81 (74%), Positives = 65/81 (80%)
 Frame = +1

Query: 118 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVAL 297
           +QYKKSKER  AQGRRRYDRKQQG+GGQ+KPIF         IVLR+EC +CK R Q  L
Sbjct: 41  TQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECKYRKQTPL 100

Query: 298 KRCKHFELGGDKKRKGQMIQF 360
           KRCKHFELGGDKKRKGQMIQF
Sbjct: 101 KRCKHFELGGDKKRKGQMIQF 121


>AY094807-1|AAM11160.1|  572|Drosophila melanogaster LD27273p
           protein.
          Length = 572

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 337 SSCHHQAQSAYNASGPPVTSPCSLHI 260
           +SCHH   S  N+ GPP+ S   LHI
Sbjct: 98  TSCHHDLMSTGNSFGPPIRSSQELHI 123


>AE014134-270|AAF51356.2|  916|Drosophila melanogaster CG31935-PA
           protein.
          Length = 916

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 337 SSCHHQAQSAYNASGPPVTSPCSLHI 260
           +SCHH   S  N+ GPP+ S   LHI
Sbjct: 98  TSCHHDLMSTGNSFGPPIRSSQELHI 123


>X83527-1|CAA58508.1|  516|Drosophila melanogaster myocyte
           enhancer-binding factor 2 protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 319 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 350


>U19493-1|AAF06817.1|  515|Drosophila melanogaster MADS domain
           transcription factorD-MEF2 protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 325 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 356


>U03292-1|AAA19957.1|  515|Drosophila melanogaster mef2 protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 325 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 356


>AY118311-1|AAM48340.1|  473|Drosophila melanogaster GH24154p
           protein.
          Length = 473

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 258 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 289


>AY061096-1|AAL28644.1|  487|Drosophila melanogaster LD08608p
           protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 297 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 328


>AE013599-974|AAM71044.1|  540|Drosophila melanogaster CG1429-PD,
           isoform D protein.
          Length = 540

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 325 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 356


>AE013599-973|AAM71043.1|  515|Drosophila melanogaster CG1429-PC,
           isoform C protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 325 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 356


>AE013599-972|AAF58872.1|  516|Drosophila melanogaster CG1429-PA,
           isoform A protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 319 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 350


>AE013599-971|AAM71042.1|  509|Drosophila melanogaster CG1429-PB,
           isoform B protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 319 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 350


>AE013599-970|AAS64881.1|  501|Drosophila melanogaster CG1429-PF,
           isoform F protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N++ PP TSP S+ +  E Q
Sbjct: 286 VPHSSLSHLAVS--NSTPPPATSPVSIKVKAEPQ 317


>U07422-1|AAA20463.1|  515|Drosophila melanogaster myocyte-specific
           enhancer factor 2 protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 346 VPSSSCHHQAQSAYNASGPPVTSPCSLHIPDEVQ 245
           VP SS  H A S  N + PP TSP S+ +  E Q
Sbjct: 325 VPHSSLSHLAVS--NRTPPPATSPVSIKVKAEPQ 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,038,352
Number of Sequences: 53049
Number of extensions: 282718
Number of successful extensions: 727
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)