Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J07
         (443 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2Z450 Cluster: Putative uncharacterized protein; n=3; ...    33   3.7  
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g...    31   8.5  

>UniRef50_A2Z450 Cluster: Putative uncharacterized protein; n=3; Oryza
            sativa|Rep: Putative uncharacterized protein - Oryza
            sativa subsp. indica (Rice)
          Length = 2040

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 267  FFFYVI*LCSCYQYRNLRILFYIEDYVLD*IL---LICGPKFSSSVTKVRVTSLCVIILP 97
            F F+++ L   + Y+ + I  ++ D  L+ I    L+ GPKFS    K+  TSL  +I P
Sbjct: 1087 FSFHLVILYDNFLYKYMGIEVHLGDETLELINSHELLDGPKFSVKAAKIGTTSLYWLIWP 1146

Query: 96   VIF 88
              F
Sbjct: 1147 ASF 1149


>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
           gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
          Length = 268

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = -1

Query: 425 FSILNI*YWCFINALNCALKLYFLKCCTHKM--TFNR-TKTKE*FN*YYLQVTIRIFFSM 255
           F   N  YW  IN     L L FLK     +  +FN  +K K+  + YY+ + I+I    
Sbjct: 55  FFFKNKTYWYLINIFLFLLNLNFLKLLNININNSFNTISKIKKNISLYYIYI-IKILLIF 113

Query: 254 SFNCVLVISTETSEY 210
           ++N  L+   +T++Y
Sbjct: 114 NYNLFLLFFYKTNKY 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,806,420
Number of Sequences: 1657284
Number of extensions: 5948926
Number of successful extensions: 11278
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11275
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)