Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J07
         (443 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094960-1|AAM11313.1|  964|Drosophila melanogaster SD03277p pro...    28   6.6  
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB...    28   6.6  
AY069221-1|AAL39366.1|  287|Drosophila melanogaster GH26851p pro...    27   8.7  
AE014297-2513|AAS65171.1|  287|Drosophila melanogaster CG7675-PC...    27   8.7  
AE014297-2512|AAF55547.1|  287|Drosophila melanogaster CG7675-PA...    27   8.7  
AE014297-2511|AAF55546.2|  336|Drosophila melanogaster CG7675-PB...    27   8.7  

>AY094960-1|AAM11313.1|  964|Drosophila melanogaster SD03277p
           protein.
          Length = 964

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 258 RKKNPNCNLQIILIKLLFSFSSIKSHFMRT 347
           +   P C LQ+  +K L S SS + +F+RT
Sbjct: 265 KNAKPTCELQLPSMKKLMSNSSAQPYFLRT 294


>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
            protein.
          Length = 5146

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 258  RKKNPNCNLQIILIKLLFSFSSIKSHFMRT 347
            +   P C LQ+  +K L S SS + +F+RT
Sbjct: 4447 KNAKPTCELQLPSMKKLMSNSSAQPYFLRT 4476


>AY069221-1|AAL39366.1|  287|Drosophila melanogaster GH26851p
           protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -2

Query: 274 FGFFFLCHLIVFLLSVQKPPNIILYRRLCFRLNTIDM 164
           +G F L HL++ +L    P  I++     +RL+++++
Sbjct: 114 YGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNL 150


>AE014297-2513|AAS65171.1|  287|Drosophila melanogaster CG7675-PC,
           isoform C protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -2

Query: 274 FGFFFLCHLIVFLLSVQKPPNIILYRRLCFRLNTIDM 164
           +G F L HL++ +L    P  I++     +RL+++++
Sbjct: 114 YGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNL 150


>AE014297-2512|AAF55547.1|  287|Drosophila melanogaster CG7675-PA,
           isoform A protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -2

Query: 274 FGFFFLCHLIVFLLSVQKPPNIILYRRLCFRLNTIDM 164
           +G F L HL++ +L    P  I++     +RL+++++
Sbjct: 114 YGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNL 150


>AE014297-2511|AAF55546.2|  336|Drosophila melanogaster CG7675-PB,
           isoform B protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -2

Query: 274 FGFFFLCHLIVFLLSVQKPPNIILYRRLCFRLNTIDM 164
           +G F L HL++ +L    P  I++     +RL+++++
Sbjct: 163 YGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNL 199


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,300,076
Number of Sequences: 53049
Number of extensions: 260162
Number of successful extensions: 364
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)