Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J07
         (443 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66567-5|CAA91492.4|  757|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U53155-10|AAC48271.1|  346|Caenorhabditis elegans Seven tm recep...    28   2.7  
AL132864-4|CAB63393.2|  240|Caenorhabditis elegans Hypothetical ...    27   4.6  
Z81056-6|CAB02906.1|  398|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z92825-7|CAB07317.1|  487|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81524-4|CAB04250.1|  528|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81041-15|CAB02792.1|  487|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL132846-5|CAJ76972.1|  377|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z66567-5|CAA91492.4|  757|Caenorhabditis elegans Hypothetical
           protein ZK455.8a protein.
          Length = 757

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 250 LIVFLLSVQKPPNIILYRRLCFRLNTIDMWSKIQFFCHES 131
           ++  ++SVQ+ P+ +    + + +   D W KI FF  ES
Sbjct: 172 IVYLIISVQQVPHAMFNLSVVYMMYQPDHWCKIPFFNEES 211


>U53155-10|AAC48271.1|  346|Caenorhabditis elegans Seven tm receptor
           protein 139 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 398 CFINALNCALKLYF-LKCCTHKMTFNRTK 315
           CF+  + CALK+YF LK   H M+  RTK
Sbjct: 212 CFLTIIFCALKIYFKLKEDIHSMS-ERTK 239


>AL132864-4|CAB63393.2|  240|Caenorhabditis elegans Hypothetical
           protein Y53H1A.2 protein.
          Length = 240

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 201 YKIIFGGFCTDNKNTIK*HRKKNPNCN 281
           YK    G+C  + ++++ H KK PNC+
Sbjct: 197 YKCQKCGYCYQSPDSLRRHWKKTPNCD 223


>Z81056-6|CAB02906.1|  398|Caenorhabditis elegans Hypothetical
           protein F09F3.10 protein.
          Length = 398

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 347 CTHKMTFNRTKTKE*FN*YYLQVTIRIFFS 258
           C  K+ +N+TK  + FN Y   + I  FF+
Sbjct: 344 CAVKLVYNQTKVSDLFNAYKFDLYISSFFN 373


>Z92825-7|CAB07317.1|  487|Caenorhabditis elegans Hypothetical
           protein C27A7.6 protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 213 FGG-FCTDNKNTIK*HRKKNPNCNLQIILIKLLFSFSSIKSHFMRTTL 353
           FGG + TDNK  IK         N+    I+++ S   IKSHF+R  L
Sbjct: 95  FGGMYITDNKG-IKTAGLLGTTLNVIGASIRMIASIPFIKSHFVRECL 141


>Z81524-4|CAB04250.1|  528|Caenorhabditis elegans Hypothetical
           protein F32H5.4 protein.
          Length = 528

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = -1

Query: 263 FSMSFNCVLVISTETSEYYFI*KTMF*TEYY*YVVQNSVLLSRKLG*RAFVLLYYPLFL 87
           +S+      ++++ T+   FI K+M   E+Y  V++NS +  +    R   +L   LF+
Sbjct: 413 YSLIIRVATLLASATASQVFITKSMVLMEFYPTVIRNSAVSFKSSASRIGTILGPQLFI 471


>Z81041-15|CAB02792.1|  487|Caenorhabditis elegans Hypothetical
           protein C27A7.6 protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 213 FGG-FCTDNKNTIK*HRKKNPNCNLQIILIKLLFSFSSIKSHFMRTTL 353
           FGG + TDNK  IK         N+    I+++ S   IKSHF+R  L
Sbjct: 95  FGGMYITDNKG-IKTAGLLGTTLNVIGASIRMIASIPFIKSHFVRECL 141


>Z70212-6|CAA94166.1|  336|Caenorhabditis elegans Hypothetical
           protein R04D3.8 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 116 FVLLYYPLFLSNVSV*FYLVLIAINFILY 30
           F+  + P FLS   +  +L+L+ + F++Y
Sbjct: 134 FLAFHIPFFLSTKQLSLFLLLVDLGFVIY 162


>AL132846-5|CAJ76972.1|  377|Caenorhabditis elegans Hypothetical
           protein Y43D4A.3a protein.
          Length = 377

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 213 FGG-FCTDNKNTIK*HRKKNPNCNLQIILIKLLFSFSSIKSHFMRTTL 353
           FGG + TDNK  IK         N+    I+++ S   IKSHF+R  L
Sbjct: 82  FGGMYITDNKG-IKTAGLLGTTLNVIGASIRMIASIPFIKSHFVRECL 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,498,944
Number of Sequences: 27780
Number of extensions: 157508
Number of successful extensions: 338
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)