Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J06
         (492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   1.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   9.9  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
 Frame = +3

Query: 279 DNLENSISEHDEVNSKKFNPDW--------KDLDTRKLPEWYDRAKI 395
           DN    + ++++V S     DW        KD + +K  +W DRA I
Sbjct: 176 DNTYEVLIDNEKVESGSLEDDWDFLPPKKIKDPEAKKPEDWDDRATI 222


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 294 SISEHDEVNSKKFNPDW 344
           +++EH + N+ K +PDW
Sbjct: 674 NVTEHFKGNNWKVHPDW 690


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 306  HDEVNSKKFNPDWKDLDT 359
            +DE+N       W DLDT
Sbjct: 1682 YDELNRPAVRTKWTDLDT 1699


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 306  HDEVNSKKFNPDWKDLDT 359
            +DE+N       W DLDT
Sbjct: 1683 YDELNRPAVRTKWTDLDT 1700


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,494
Number of Sequences: 2352
Number of extensions: 8814
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)