Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J06
         (492 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119638-1|AAM50292.1|  494|Drosophila melanogaster RE43246p pro...    90   2e-18
AE014296-1964|AAO41255.1|  494|Drosophila melanogaster CG6128-PB...    90   2e-18
AE014296-1963|AAF50054.2|  494|Drosophila melanogaster CG6128-PA...    90   2e-18
AE014134-2328|AAF53283.3|  708|Drosophila melanogaster CG16970-P...    29   3.4  
AY051737-1|AAK93161.1| 1009|Drosophila melanogaster LD26426p pro...    29   4.5  
AE014297-4269|AAO41607.1| 1009|Drosophila melanogaster CG1646-PC...    29   4.5  
AE014297-4268|AAF56816.1| 1009|Drosophila melanogaster CG1646-PA...    29   4.5  
AE014297-4267|AAO41608.2| 1026|Drosophila melanogaster CG1646-PD...    29   4.5  
AE014297-4266|AAN14302.2| 1066|Drosophila melanogaster CG1646-PB...    29   4.5  

>AY119638-1|AAM50292.1|  494|Drosophila melanogaster RE43246p
           protein.
          Length = 494

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = +3

Query: 327 KFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNW 464
           ++ P+W  LD R LP+WYD AK+GIFLH+GVYSVPS+GSEWFW+NW
Sbjct: 33  RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNW 78


>AE014296-1964|AAO41255.1|  494|Drosophila melanogaster CG6128-PB,
           isoform B protein.
          Length = 494

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = +3

Query: 327 KFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNW 464
           ++ P+W  LD R LP+WYD AK+GIFLH+GVYSVPS+GSEWFW+NW
Sbjct: 33  RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNW 78


>AE014296-1963|AAF50054.2|  494|Drosophila melanogaster CG6128-PA,
           isoform A protein.
          Length = 494

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = +3

Query: 327 KFNPDWKDLDTRKLPEWYDRAKIGIFLHWGVYSVPSYGSEWFWSNW 464
           ++ P+W  LD R LP+WYD AK+GIFLH+GVYSVPS+GSEWFW+NW
Sbjct: 33  RYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNW 78


>AE014134-2328|AAF53283.3|  708|Drosophila melanogaster CG16970-PA
           protein.
          Length = 708

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = -3

Query: 382 SYHSGNFRVSKSFQSGLNFLEFTSSCSDIEFSRLSKLYFLAFTKYTSD--NNMNILMILW 209
           SYHS  +    S +    F     SC   +   +SKL+   F ++T D  +  N  +  W
Sbjct: 527 SYHSYQYPSQDSCEGFNQFATNAGSCLGNQRMMVSKLWNSCFPEFTPDHVHRHNFYLCQW 586

Query: 208 *RNAFLIIMSCILRMLDCL 152
            RN  + I+    R +  +
Sbjct: 587 QRNTQVRIVYLFYRWITAI 605


>AY051737-1|AAK93161.1| 1009|Drosophila melanogaster LD26426p
           protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 204 RYHRIMRIFILLSLVYLVNAKKYNFDNLENSISEHD 311
           RYHR+++I+  L L         +FDN ++ I++HD
Sbjct: 444 RYHRVVQIYDRL-LAIPTQGYNGHFDNFQDLINQHD 478


>AE014297-4269|AAO41607.1| 1009|Drosophila melanogaster CG1646-PC,
           isoform C protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 204 RYHRIMRIFILLSLVYLVNAKKYNFDNLENSISEHD 311
           RYHR+++I+  L L         +FDN ++ I++HD
Sbjct: 444 RYHRVVQIYDRL-LAIPTQGYNGHFDNFQDLINQHD 478


>AE014297-4268|AAF56816.1| 1009|Drosophila melanogaster CG1646-PA,
           isoform A protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 204 RYHRIMRIFILLSLVYLVNAKKYNFDNLENSISEHD 311
           RYHR+++I+  L L         +FDN ++ I++HD
Sbjct: 444 RYHRVVQIYDRL-LAIPTQGYNGHFDNFQDLINQHD 478


>AE014297-4267|AAO41608.2| 1026|Drosophila melanogaster CG1646-PD,
           isoform D protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 204 RYHRIMRIFILLSLVYLVNAKKYNFDNLENSISEHD 311
           RYHR+++I+  L L         +FDN ++ I++HD
Sbjct: 461 RYHRVVQIYDRL-LAIPTQGYNGHFDNFQDLINQHD 495


>AE014297-4266|AAN14302.2| 1066|Drosophila melanogaster CG1646-PB,
           isoform B protein.
          Length = 1066

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 204 RYHRIMRIFILLSLVYLVNAKKYNFDNLENSISEHD 311
           RYHR+++I+  L L         +FDN ++ I++HD
Sbjct: 501 RYHRVVQIYDRL-LAIPTQGYNGHFDNFQDLINQHD 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,375,499
Number of Sequences: 53049
Number of extensions: 392173
Number of successful extensions: 936
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)