Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J05
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   9.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.8  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   9.8  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 19  YAKRAFVHWY 48
           + KRA+V WY
Sbjct: 198 WGKRAYVTWY 207


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 136 WTPPRERVREPKSTKPMNMFEG 201
           WTP  ER+   +      M+EG
Sbjct: 482 WTPKCERLARTEKLFVTPMYEG 503


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 136 WTPPRERVREPKSTKPMNMFEG 201
           WTP  ER+   +      M+EG
Sbjct: 482 WTPKCERLARTEKLFVTPMYEG 503


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 136 WTPPRERVREPKSTKPMNMFEG 201
           WTP  ER+   +      M+EG
Sbjct: 482 WTPKCERLARTEKLFVTPMYEG 503


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 136 WTPPRERVREPKSTKPMNMFEG 201
           WTP  ER+   +      M+EG
Sbjct: 482 WTPKCERLARTEKLFVTPMYEG 503


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 119 VTSRERPSHSRASENSPSSIPSP 51
           +  R   + S AS  SPS  P P
Sbjct: 202 IPQRTASTASSASNYSPSQSPEP 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,510
Number of Sequences: 336
Number of extensions: 1098
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)