BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_J05 (386 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 64 7e-12 SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 64 7e-12 SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 42 3e-05 SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 28 0.44 SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 27 1.4 SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 25 3.1 SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 25 3.1 SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 5.5 SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 24 7.2 SPBC3B8.06 |||conserved fungal protein|Schizosaccharomyces pombe... 24 9.6 SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 24 9.6 SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 24 9.6 >SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr 2|||Manual Length = 455 Score = 64.1 bits (149), Expect = 7e-12 Identities = 27/28 (96%), Positives = 28/28 (100%) Frame = +1 Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93 DLMY+KRAFVHWYVGEGMEEGEFSEARE Sbjct: 400 DLMYSKRAFVHWYVGEGMEEGEFSEARE 427 >SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosaccharomyces pombe|chr 2|||Manual Length = 449 Score = 64.1 bits (149), Expect = 7e-12 Identities = 27/28 (96%), Positives = 28/28 (100%) Frame = +1 Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93 DLMY+KRAFVHWYVGEGMEEGEFSEARE Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEARE 423 >SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces pombe|chr 2|||Manual Length = 448 Score = 42.3 bits (95), Expect = 3e-05 Identities = 15/24 (62%), Positives = 21/24 (87%) Frame = +1 Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87 M+ ++AF+HWY GEGM+E EF+EA Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411 >SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccharomyces pombe|chr 1|||Manual Length = 697 Score = 28.3 bits (60), Expect = 0.44 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -1 Query: 194 NIFIGLVLFGSLT-LSLGGVHADFFVVTSRERPSHSRASENSPSSIPSPTYQCTKA-RLA 21 NI+ L+ G ++ L + G H ++S SHS+ + P S P+ T K+ RL Sbjct: 521 NIWKDLIADGQISKLYIDGKHRCEAAISSHSSESHSKRTTQQPKSTPNHTNIKVKSERLQ 580 Query: 20 YIK 12 +++ Sbjct: 581 HVR 583 >SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Schizosaccharomyces pombe|chr 1|||Manual Length = 564 Score = 26.6 bits (56), Expect = 1.4 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -1 Query: 116 TSRERPSHSRASENSPSSIPSPTY 45 TSR R SH++ ++SP PS T+ Sbjct: 148 TSRRRSSHNQHEDSSPPHEPSVTF 171 >SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 569 Score = 25.4 bits (53), Expect = 3.1 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = -1 Query: 182 GLVLFGSLTLSLGGVHADFFVVTSRERPSHSRASENSPSSIPSPTY 45 G LFG L+ GVH ++ ++E P SP+ P Y Sbjct: 126 GFWLFGFLST---GVHCTMYIPATKEHPLRIWVPRRSPTKQTWPNY 168 >SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 345 Score = 25.4 bits (53), Expect = 3.1 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = -3 Query: 93 LTSFGELTLLHTLTDVPVHEGALSVHQVLVP 1 +TS L+ + T+ + HEG L++++ +VP Sbjct: 287 MTSQQRLSYVFTIKSIVAHEGFLALYKGIVP 317 >SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 24.6 bits (51), Expect = 5.5 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = -1 Query: 95 HSRASENSPSSIPSP-TYQCTKAR 27 HS N+ +SIPSP T+ C + R Sbjct: 599 HSLRDSNTENSIPSPLTFACKEIR 622 >SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosaccharomyces pombe|chr 2|||Manual Length = 548 Score = 24.2 bits (50), Expect = 7.2 Identities = 15/54 (27%), Positives = 20/54 (37%) Frame = +1 Query: 46 YVGEGMEEGEFSEARE*LGRSREVTTKKSAWTPPRERVREPKSTKPMNMFEGGS 207 Y G+ FS+ RE T K P + VREP+ P G+ Sbjct: 321 YKGKEFVGNRFSQMRELYTAKPSPITTKVVSRPSQSDVREPQEQVPSKNLHRGA 374 >SPBC3B8.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 511 Score = 23.8 bits (49), Expect = 9.6 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +1 Query: 4 HEDLMYAKRAFVHWYVG 54 H DL +A AF+ W+ G Sbjct: 325 HHDLQHASLAFMLWWAG 341 >SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 970 Score = 23.8 bits (49), Expect = 9.6 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +1 Query: 1 RHEDLMYAKRAFVHWYVGEGMEEGEFSE 84 RH A RA + +YVG+ ++ G E Sbjct: 852 RHRMAQMAGRASIEYYVGQALKGGVAEE 879 >SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Schizosaccharomyces pombe|chr 3|||Manual Length = 997 Score = 23.8 bits (49), Expect = 9.6 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 Query: 103 RSREVTTKKSAWTPPRERVREPKSTKP 183 R+ + TK T PR + + PK +KP Sbjct: 274 RAPQSPTKPVLLTAPRRKNKSPKKSKP 300 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,208,191 Number of Sequences: 5004 Number of extensions: 18030 Number of successful extensions: 78 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 78 length of database: 2,362,478 effective HSP length: 65 effective length of database: 2,037,218 effective search space used: 128344734 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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