Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J05
(386 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 66 1e-11
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 65 2e-11
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 64 4e-11
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 64 4e-11
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 42 1e-04
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 42 1e-04
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 42 1e-04
03_01_0034 + 318432-318825,318902-319851 42 1e-04
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 42 1e-04
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 42 1e-04
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 42 1e-04
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 40 7e-04
01_06_1014 - 33810112-33811995 32 0.14
03_02_0915 + 12360079-12360095,12360225-12361353 29 1.7
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 29 1.7
12_01_0285 + 2120130-2121204,2122842-2123116 27 3.9
11_01_0281 + 2086674-2087652,2089200-2089483 27 3.9
11_01_0277 + 2060328-2061061,2061360-2061420,2061560-2061679,206... 27 3.9
01_06_1344 + 36474144-36474296,36474786-36474858,36475309-364754... 27 3.9
02_04_0488 + 23397480-23397687,23397777-23397805,23398462-233985... 27 5.2
02_01_0655 + 4867737-4868642 27 5.2
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 26 9.1
09_06_0341 + 22406709-22407860 26 9.1
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 26 9.1
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 26 9.1
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 65.7 bits (153), Expect = 1e-11
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1
Query: 1 RHEDLMYAKRAFVHWYVGEGMEEGEFSEARE 93
R DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 474 RKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 504
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEARE 423
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEARE 423
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 396 DLMYSKRAFVHWYVGEGMEEGEFSEARE 423
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 568 MFRRKAFLHWYTGEGMDEMEFTEA 591
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 409 MFRRKAFLHWYTGEGMDEMEFTEA 432
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 39.9 bits (89), Expect = 7e-04
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY EGM+E EF+EA
Sbjct: 404 MFRRKAFLHWYTSEGMDEMEFTEA 427
>01_06_1014 - 33810112-33811995
Length = 627
Score = 32.3 bits (70), Expect = 0.14
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 7 EDLMYAKRAFVHWYVGEGMEEGEFSEARE*LGR 105
E+ + +KRA +HW++GEG+ ++ E +G+
Sbjct: 182 ENSIISKRAMIHWWIGEGLVAATRNQTAEDVGK 214
>03_02_0915 + 12360079-12360095,12360225-12361353
Length = 381
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 73 EFSEARE*LGRSREVTTKKSAWTPPRERVREPKSTKPMNMFEGGSHTDT 219
E+++ E + V ++ PP E + E + KPM+ GGS +D+
Sbjct: 19 EYADEAELIPSGCTVVVRRRVAGPPAETIVELTTKKPMSQGGGGSSSDS 67
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 83 SENSPSSIPSPTYQCTKARLAYIKS 9
+ S S+ PSPT+ C K R Y KS
Sbjct: 142 AHQSSSAAPSPTWGCPKCRFPYPKS 166
>12_01_0285 + 2120130-2121204,2122842-2123116
Length = 449
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 130 SAWTPPRERVREPKSTKPMNMFEGGS 207
S WT P R + K+ +P N GGS
Sbjct: 110 SVWTRPNSRKGKKKAKQPANALAGGS 135
>11_01_0281 + 2086674-2087652,2089200-2089483
Length = 420
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 130 SAWTPPRERVREPKSTKPMNMFEGGS 207
S WT P R + K+ +P N GGS
Sbjct: 113 SVWTRPNSRKGKKKAKQPANALAGGS 138
>11_01_0277 +
2060328-2061061,2061360-2061420,2061560-2061679,
2061947-2062112,2062229-2062635
Length = 495
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 130 SAWTPPRERVREPKSTKPMNMFEGGS 207
S WT P R + K+ +P N GGS
Sbjct: 111 SVWTRPNSRKGKKKAKQPANALAGGS 136
>01_06_1344 +
36474144-36474296,36474786-36474858,36475309-36475481,
36475613-36475667,36475750-36475766
Length = 156
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 127 KSAWTPPRERVREPKSTKPMNMFE 198
KS WTPP+ R K K N ++
Sbjct: 78 KSQWTPPKSRTVYTKDNKQSNQYD 101
>02_04_0488 + 23397480-23397687,23397777-23397805,23398462-23398564,
23398811-23398982,23399380-23399440,23399757-23399889,
23400438-23400709,23400776-23400843,23401096-23401235,
23401413-23401499,23401580-23402088,23402173-23402990,
23403024-23403222,23403662-23403817
Length = 984
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 164 SLTLSLGGVHADFFVVTSR--ERPSHSRASENSPSSIPS 54
S+ ++ +H++ + TSR E HS+AS +S S+PS
Sbjct: 933 SMAMTCLRLHSEMALQTSRALESADHSKASSSSSRSLPS 971
>02_01_0655 + 4867737-4868642
Length = 301
Score = 27.1 bits (57), Expect = 5.2
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = -1
Query: 164 SLTLSLGGVHADFFVVTSRERPSHSRASENSPSSIPSP 51
SL+LSL G H D +E PS SR SPS PSP
Sbjct: 198 SLSLSLPGFHHDSARSHFQELPSPSR----SPSPPPSP 231
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 50 SVRVWRRVSSPKLVSDLAAL 109
SVRVWRRVS ++ AAL
Sbjct: 214 SVRVWRRVSGIVFLTSFAAL 233
>09_06_0341 + 22406709-22407860
Length = 383
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 115 VTTKKSAWTPPRERVREPKSTKPMNMFE 198
+T K+ W PPR R +PK P+ E
Sbjct: 99 ITNPKTTW-PPRNRADDPKLHNPLLRLE 125
>08_02_0823 +
21557111-21557292,21557391-21557473,21557722-21557810,
21557985-21558058,21558264-21558314,21558406-21558482,
21560206-21560900
Length = 416
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 116 TSRERPSHSRASENSPSSIPSPTYQ 42
+S + PS S +S SPS +PSP Q
Sbjct: 325 SSTDSPSSSSSSSLSPSPLPSPPPQ 349
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 26.2 bits (55), Expect = 9.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 188 FIGLVLFGSLTLSLGGVHADFFVVTSRERPSHSRASENSPSSIPSPTYQCTKAR 27
F GL G T+ G + RE ++ SPS+ PSPT + +K +
Sbjct: 460 FAGLDQHGHPTVDPGESRVLCLTASHRELLQRLGRADESPSAPPSPTRKLSKVK 513
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,114,856
Number of Sequences: 37544
Number of extensions: 127751
Number of successful extensions: 399
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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