Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J05
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 65 1e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 65 1e-11
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 65 1e-11
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 65 1e-11
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 65 1e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 65 1e-11
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 65 1e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 65 1e-11
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 65 1e-11
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 64 3e-11
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 64 3e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 64 3e-11
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 64 3e-11
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 64 3e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 64 3e-11
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 64 3e-11
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 59 9e-10
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 42 1e-04
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 42 1e-04
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 42 1e-04
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 42 1e-04
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 29 0.86
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 29 0.86
AF098992-3|AAC67458.1| 323|Caenorhabditis elegans Hypothetical ... 27 6.1
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 26 8.1
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 402 DLMYAKRAFVHWYVGEGMEEGEFSEARE 429
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 391 DLMYAKRAFVHWYVGEGMEEGEFSEARE 418
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEARE 423
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEARE 423
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 401 DLMYAKRAFVHWYVGEGMEEGEFSEARE 428
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 395 DLMYAKRAFVHWYVGEGMEEGEFSEARE 422
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEARE 423
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 374 DLMYAKRAFVHWYVGEGMEEGEFSEARE 401
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 396 DLMYAKRAFVHWYVGEGMEEGEFSEARE 423
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEF+EARE
Sbjct: 394 DLMYAKRAFVHWYVGEGMEEGEFTEARE 421
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEF+EARE
Sbjct: 394 DLMYAKRAFVHWYVGEGMEEGEFTEARE 421
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEF+EARE
Sbjct: 394 DLMYAKRAFVHWYVGEGMEEGEFTEARE 421
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEF+EARE
Sbjct: 394 DLMYAKRAFVHWYVGEGMEEGEFTEARE 421
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEF+EARE
Sbjct: 394 DLMYAKRAFVHWYVGEGMEEGEFTEARE 421
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEF+EARE
Sbjct: 394 DLMYAKRAFVHWYVGEGMEEGEFTEARE 421
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMYAKRAFVHWYVGEGMEEGEF+EARE
Sbjct: 31 DLMYAKRAFVHWYVGEGMEEGEFTEARE 58
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 59.3 bits (137), Expect = 9e-10
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 10 DLMYAKRAFVHWYVGEGMEEGEFSEARE 93
DLMY+KRAFVHW+VGEGMEEGEF EAR+
Sbjct: 399 DLMYSKRAFVHWFVGEGMEEGEFMEARD 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEA 411
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.5 bits (63), Expect = 0.86
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
++ ++AF+HWY MEE EF++A
Sbjct: 386 LFRRKAFLHWYT---MEESEFTDA 406
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.5 bits (63), Expect = 0.86
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 16 MYAKRAFVHWYVGEGMEEGEFSEA 87
++ ++AF+HWY MEE EF++A
Sbjct: 386 LFRRKAFLHWYT---MEESEFTDA 406
>AF098992-3|AAC67458.1| 323|Caenorhabditis elegans Hypothetical
protein F53C3.7 protein.
Length = 323
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 64 EEGEFSEARE*LGRSREVTTKKSAWTPPRER 156
E GE SEA E R R+ ++S WT R++
Sbjct: 232 EAGEASEATEAKRRKRKQRGQQSCWTRKRQK 262
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 167 GSLTLSLGGVHADFFVVTSRE 105
G L L GG+ +FF++ SRE
Sbjct: 556 GELALDYGGLSREFFILLSRE 576
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 167 GSLTLSLGGVHADFFVVTSRE 105
G L L GG+ +FF++ SRE
Sbjct: 556 GELALDYGGLSREFFILLSRE 576
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,685,931
Number of Sequences: 27780
Number of extensions: 101742
Number of successful extensions: 387
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -