Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J03
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    20   9.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   9.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.5  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 17  VQPRRPRHQPTGFTRV-LSLAESL 85
           V PR+ R + T FTR  L L E L
Sbjct: 122 VNPRKQRRERTTFTRAQLDLLEGL 145


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 238 PLSGMRETIARRLTAAKQSIPHYQLVATVNVE 333
           P  G RE + +          H Q++A  N+E
Sbjct: 215 PFEGAREIVDKNRRGEIFYYMHQQIIARFNIE 246


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 76  CERKDSRKSCRL 41
           C+ KDS K+C+L
Sbjct: 88  CDWKDSVKNCKL 99


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 387 GFLSGELVVDQLPHSQGGLDVNSGNELVVRDALLGGC 277
           GF++  +  D   H Q GL   S  +++  +A  G C
Sbjct: 419 GFVAFTIGYDLNQHLQTGLPAGSYCDVISGNAENGSC 455


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 387 GFLSGELVVDQLPHSQGGLDVNSGNELVVRDALLGGC 277
           GF++  +  D   H Q GL   S  +++  +A  G C
Sbjct: 420 GFVAFTIGYDLNQHLQTGLPAGSYCDVISGNAENGSC 456


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 357 QLPHSQGGLDVNSGN 313
           ++ H +  LDVN GN
Sbjct: 64  RIKHLEPNLDVNQGN 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.132    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,528
Number of Sequences: 336
Number of extensions: 1418
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)