Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J03
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 73 8e-14
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 73 1e-13
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 72 2e-13
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 52 2e-07
11_02_0108 - 8372390-8372914 31 0.44
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 31 0.44
03_01_0024 - 214141-215097 31 0.44
10_08_0904 + 21464762-21467479 29 1.3
06_03_1144 - 27980216-27980896,27981682-27982048,27983499-279836... 29 1.3
03_05_0483 - 24806984-24808324 29 1.3
02_05_1127 + 34292894-34293284,34293948-34295443 29 1.3
02_04_0582 - 24076614-24076643,24076961-24077440 28 3.1
12_01_0683 + 5821598-5821916,5822348-5822987,5824250-5824329,582... 28 4.1
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 28 4.1
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 28 4.1
11_04_0371 - 16913079-16913173,16913427-16913547 27 5.4
09_02_0124 - 4546722-4547107,4547677-4547854,4548027-4548215,454... 27 5.4
08_02_0702 - 20179838-20180040,20180397-20180464,20180642-201809... 27 5.4
03_05_0231 - 22170343-22172004,22172225-22172449 27 5.4
03_02_0358 + 7784067-7784128,7784239-7785040,7785513-7785617,778... 27 5.4
04_04_0893 - 29152150-29153156,29153234-29153561,29153645-291538... 27 7.2
01_03_0281 - 14570635-14574633 27 7.2
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 9.5
11_03_0186 + 11332864-11333697 27 9.5
10_08_0239 - 16099673-16100251 27 9.5
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 27 9.5
06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027 27 9.5
03_02_0687 + 10413338-10413430,10413538-10413934,10414040-104141... 27 9.5
02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 27 9.5
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 27 9.5
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 73.3 bits (172), Expect = 8e-14
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +1
Query: 46 DRIYASPFARRIAELKNFRLGG-QGTGLYGSLKSGDLSDXXXXXXXXXXXXXXXXXXXXX 222
DR ++SP AR++AE N L +GTG G + D+ D
Sbjct: 212 DRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIEDYLASVAKGAKKETAAAPGLG- 270
Query: 223 TFVDLPLSGMRETIARRLTAAKQSIPHYQLVATVNVESTLAMRKLVNDKLAAEKSDINVS 402
+VDLP + +R+ A RL +KQ+IPHY L V+ + +R +N L +S
Sbjct: 271 -YVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSELN-PLQDTSGGKKIS 328
Query: 403 VNDLIVNAVAATCKRVP 453
+NDL++ A A + VP
Sbjct: 329 INDLVIKAAALALRNVP 345
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 72.5 bits (170), Expect = 1e-13
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +1
Query: 46 DRIYASPFARRIAELKNFRLGG-QGTGLYGSLKSGDLSDXXXXXXXXXXXXXXXXXXXXX 222
DRI++SP AR++AE N L +GTG G + D+ D
Sbjct: 255 DRIFSSPLARKLAEDNNVPLSSVKGTGPDGRILKADIEDYLAKGCRKEALAAPGL----- 309
Query: 223 TFVDLPLSGMRETIARRLTAAKQSIPHYQLVATVNVESTLAMRKLVNDKLAAEKSDINVS 402
++ D+P + +R+ A RL ++KQ+IPHY L V++ + +R +N L +S
Sbjct: 310 SYTDVPNAQIRKVTANRLLSSKQTIPHYYLTVDTRVDNLIKLRGELN-PLQESSGGKKIS 368
Query: 403 VNDLIVNAVAATCKRVP 453
+NDL++ A A ++VP
Sbjct: 369 INDLVIKAAALALRKVP 385
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 72.1 bits (169), Expect = 2e-13
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Frame = +1
Query: 49 RIYASPFARRIAELKNFRLGG-QGTGLYGSLKSGDLSDXXXXXXXXXXXXXXXXXXXXXT 225
RI++SP AR++AE N L GTG G + D+ D T
Sbjct: 1759 RIFSSPLARKLAEDNNVPLSSVMGTGPDGRILKADIEDYLASVAKGGKREALAAPGLSYT 1818
Query: 226 FVDLPLSGMRETIARRLTAAKQSIPHYQLVATVNVESTLAMRKLVNDKLAAEKSDINVSV 405
D+P + +R+ A RL ++KQ+IPHY L V++ + +R +N L +S+
Sbjct: 1819 --DVPNTQIRKVTANRLLSSKQTIPHYYLTVDARVDNLIKLRGELN-PLQESSGGKKISI 1875
Query: 406 NDLIVNAVAATCKRVP 453
NDL++ A A ++VP
Sbjct: 1876 NDLVIKAAALALRKVP 1891
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +1
Query: 226 FVDLPLSGMRETIARRLTAAKQSIPHYQLVATVNVESTLAMRKLVNDKLAAEKSDINVSV 405
+ D+P S +R+ IA+RL +KQ+ PH L V ++ LA R + E+ + VSV
Sbjct: 348 YEDIPNSQIRKVIAKRLLESKQTTPHLYLSQDVILDPLLAFRNELK-----EQHGVKVSV 402
Query: 406 NDLIVNAVAATCKRVP 453
ND+++ AVA + VP
Sbjct: 403 NDIVIKAVALALRNVP 418
>11_02_0108 - 8372390-8372914
Length = 174
Score = 31.1 bits (67), Expect = 0.44
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 156 RCSAGRVWRWGVAAGTGTGSGRYVRGLAPERHAG 257
RC W+WG+ G G G RG P RH G
Sbjct: 130 RCGRVARWQWGLKGSGGCGGGNRHRG--PGRHGG 161
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 31.1 bits (67), Expect = 0.44
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 186 GVAAGTGTGSGRYVRGLAPERHAGDHRPSPHS 281
G AA T +Y RG P R +G H P P S
Sbjct: 56 GRAAPESTPPAKYARGRRPRRGSGGHAPHPES 87
>03_01_0024 - 214141-215097
Length = 318
Score = 31.1 bits (67), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 399 NVDVGFLSGE--LVVDQLPHSQGGLDVNSGNELVVRDALLGGCEATGDGLPHAAQGQVHE 226
+V+ G L G+ + V ++ H G L ++ E+ DA GGCE DGL G+V +
Sbjct: 205 DVEGGDLEGDAGVAVGEVMHEGGPLLADTDVEVEEVDAGGGGCELVEDGLDAGEVGEVEQ 264
>10_08_0904 + 21464762-21467479
Length = 905
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +3
Query: 156 RCSAG-RVWRWGVAAGTGTGSGRYVRGLAPERHA-GDHRPSPHSRQAKHPALPARCHC*R 329
+C+A R WRW + + + GL P R A +H P +Q P PAR
Sbjct: 3 KCAARQRQWRWPLLHRSPRPTPPPPHGLHPPRRALAEHARMPAEQQQPPPVAPARVTF-S 61
Query: 330 RVHLGYEEAGQRQARR*EIRHQR 398
RV +AG+ H R
Sbjct: 62 RVFQSCAQAGREALAAGRAAHAR 84
>06_03_1144 -
27980216-27980896,27981682-27982048,27983499-27983644,
27983872-27984111
Length = 477
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/71 (39%), Positives = 33/71 (46%)
Frame = +3
Query: 162 SAGRVWRWGVAAGTGTGSGRYVRGLAPERHAGDHRPSPHSRQAKHPALPARCHC*RRVHL 341
+ GRVW AG +G + L+P PSP SR A H AR RRV +
Sbjct: 37 AVGRVWS---PAGAAAAAGHH-HSLSPA-----WVPSPSSRHAHH----ARELVNRRVQV 83
Query: 342 GYEEAGQRQAR 374
G EAG QAR
Sbjct: 84 GRMEAGLVQAR 94
>03_05_0483 - 24806984-24808324
Length = 446
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 276 HSRQAKHPALPARCHC*RRVHLGYEEAGQRQAR-R*EIRHQRFCERSYRERGSCD 437
H KHP + R +H+G EEAG+R+ + R +R ++ + G D
Sbjct: 327 HMLVDKHPMMGIRYQYLHLMHMGQEEAGKRKGKGRKTVRGEQMIGEEFGAEGEND 381
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 192 AAGTGTGSGRYVRGLAPERHAGDHRPSPHSRQAKHPALP 308
+A T + R R LAP R G R P + HPA P
Sbjct: 28 SAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASP 66
>02_04_0582 - 24076614-24076643,24076961-24077440
Length = 169
Score = 28.3 bits (60), Expect = 3.1
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +3
Query: 150 PIRCS-AGRVWRWGVAAGTGTGSGRYVRGLAPERHAG---DHRPSPHSRQAKHPALPA 311
P+ C +GRV R AG G G+ AP R G PSP S A PA P+
Sbjct: 68 PVECRWSGRV-RSFAGAGEGAGAAAVPACPAPRRGGGKKPSSAPSPSSTVATAPAHPS 124
>12_01_0683 +
5821598-5821916,5822348-5822987,5824250-5824329,
5825405-5825750,5826237-5826411,5826479-5826524,
5827179-5827384,5827616-5827696
Length = 630
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +1
Query: 67 FARRIAELKNFRLGGQGTG---LYGSLKSGDLSD 159
F+ +AE+ NF G G G LYG + + DL D
Sbjct: 140 FSLELAEISNFATGAAGAGAIQLYGFMAARDLLD 173
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 198 GTGTGSGRYVRGLAPERHAGDHRPSPHSRQAKHPALP 308
G G G G+Y H PS HS A HP+ P
Sbjct: 390 GRGRGRGQYYGHSRDANHPIGTPPSNHSALADHPSKP 426
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 219 RYVRGLAPERHAGDHRPSPHSRQAKHPALPAR 314
R+VRG++P A P P Q H P+R
Sbjct: 5 RFVRGISPAASAAPQPPPPPVAQRHHQQQPSR 36
>11_04_0371 - 16913079-16913173,16913427-16913547
Length = 71
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 195 AGTGTGSGRYVRGLA--PERHAGDHRPSPHSRQAKH 296
+G G+GS Y + ERH + PH+R+ H
Sbjct: 8 SGGGSGSHNYRKSFCVRAERHIAAQKAGPHTREVAH 43
>09_02_0124 -
4546722-4547107,4547677-4547854,4548027-4548215,
4548602-4548712,4549024-4549071,4549825-4549966,
4550349-4550695
Length = 466
Score = 27.5 bits (58), Expect = 5.4
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 126 IRITEER*PIRCSAGRVWRWGVAAGTGTGSGRYVRGLAPERH-AGDHRPSPHSRQAKHPA 302
I I E P+ + GVA T APER GD+R S + K
Sbjct: 374 INIIERAIPMLPAVDPAALLGVAEDRTTPMRAAADPAAPERRRGGDNRTSCQQGRGKSHR 433
Query: 303 LPARCHC*RRVH 338
LP++C RR+H
Sbjct: 434 LPSKCK--RRLH 443
>08_02_0702 -
20179838-20180040,20180397-20180464,20180642-20180970,
20181058-20181258,20181369-20181501,20181576-20181619,
20181694-20181753,20181872-20181931,20182840-20182921,
20183292-20183368,20183649-20183726,20183997-20184143,
20184189-20184254,20184376-20184417,20184513-20184992
Length = 689
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 336 GLDVNSGNELVVRDALLGGCEATGDGLPHAAQGQVHE 226
G+D++SG L V+ L+G AT + AQG + E
Sbjct: 147 GMDLDSGELLAVKQVLIGSSNATRE----KAQGHIRE 179
>03_05_0231 - 22170343-22172004,22172225-22172449
Length = 628
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 180 RWGVAAGTGTGSGRYVRGLAPERHAGDHR--PSPHSRQAKHPA 302
RWG AA G GR L P D R P+ ++ HPA
Sbjct: 501 RWGAAAAHAGGGGRMDLSLLPRLAKLDLRRVPAEELQEVVHPA 543
>03_02_0358 +
7784067-7784128,7784239-7785040,7785513-7785617,
7785835-7786194
Length = 442
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 105 RRPGYRFIRITEER*PIRCSAGRVWRWGVAAGTGTGSGRYVRG 233
+R G +R+ EER P CSA G AAG G G G + G
Sbjct: 388 QRIGTESLRVDEERWPRLCSAE-----GDAAGRGGGGGLFSLG 425
>04_04_0893 -
29152150-29153156,29153234-29153561,29153645-29153879,
29154149-29154194,29154579-29154711
Length = 582
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 241 LSGMRETIARRLTAAKQSIPHYQLVATVNVESTLAMRKLV 360
+S +RE + R TAA+ + P L+A + LAM L+
Sbjct: 349 ISVIRELVHRSGTAAEAATPSLLLIAVFKTSADLAMLDLI 388
>01_03_0281 - 14570635-14574633
Length = 1332
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 309 ARCHC*RRVHLGYEEAGQRQARR*EIRHQRFCERSYRERGSCDLQT 446
++CH R + L Y G Q R ++H RF + S G+C +++
Sbjct: 565 SKCHSLRALRLYYHNLGGLQIRVKHLKHLRFLDLS----GNCHIKS 606
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 26.6 bits (56), Expect = 9.5
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +3
Query: 138 EER*PIRCSAGRV-WRWGVAAGTGTGSGRYVRGLAPERHAGDHRPSPHSRQAKHPALPAR 314
+ER AGR +WG G +GRY R + A R SP R + PA
Sbjct: 10 QERHEEEADAGRGRQQWGAKEGVAAAAGRYRRERSMRTRALPPRASPPRR--PRDSDPAE 67
Query: 315 CHC*RRVHLGYEEAGQRQARR 377
+ G + G R RR
Sbjct: 68 SNGGGAPKPGGDNGGDRSPRR 88
>11_03_0186 + 11332864-11333697
Length = 277
Score = 26.6 bits (56), Expect = 9.5
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 156 RCSAGRVWRWG-----VAAGTGTGSGRYVRGLAPERHAGD---HRPSPHSRQAKHPALPA 311
RC GR+WR G +AA T G R + R +G SRQ + PA
Sbjct: 3 RCGCGRIWRGGQPVSDLAAFTLDPEGEGRREWSWRRRSGGVGWLLGEAGSRQVEEAVNPA 62
Query: 312 RCHC*RRVHLGYEEAGQRQ 368
R+H EEAG ++
Sbjct: 63 YAES-GRLHARREEAGHKE 80
>10_08_0239 - 16099673-16100251
Length = 192
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +3
Query: 162 SAGRVWRWGVAAGTGTGSGR---YVRG 233
SA RV R+ + G+GTGSG+ YV G
Sbjct: 21 SAARVERYSSSQGSGTGSGQGGGYVNG 47
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 153 IRCSAGRVWRWGVAAGTGTGSGRYVRGLAPERHAG 257
+R AGRV G A G+GS R RG+ E +G
Sbjct: 283 LRPCAGRVRAPGAGAARGSGSARCGRGVRWEAGSG 317
>06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027
Length = 178
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 162 SAGRVWRWGVAAGTGTGSGRYVRGLAPERH-AGDHRPS-PHSRQAKHP-ALPAR 314
SAG +WR G +G G R ++ R +G R S PH+R + + A PAR
Sbjct: 7 SAGWIWRDGGCSGDGWLRARGAEAMSGRRGVSGSGRCSAPHARGSGYSGAYPAR 60
>03_02_0687 +
10413338-10413430,10413538-10413934,10414040-10414168,
10414370-10414517,10414647-10415925
Length = 681
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 165 AGRVWRWGVAAGTGTGSGRYVRGLAPERHAGDHRPSPHSRQAKHPALPA 311
AG G AGTG G+G + L +++G + P P LPA
Sbjct: 393 AGAAGGAGAVAGTGAGAGTFNGSLGRSKYSGGN-PGRAGPAPMLPYLPA 440
>02_03_0084 -
15041261-15041437,15041625-15041765,15042857-15042946,
15043111-15043201,15043953-15044155,15045361-15045438,
15045535-15045651,15046111-15046161,15046405-15046500,
15046726-15046742,15046938-15047064,15050585-15050681,
15051565-15051638,15051910-15051993,15052099-15052290,
15054191-15054319,15055607-15055639,15055747-15055843,
15055940-15055990,15057494-15057564,15058305-15058455,
15058625-15058703,15059265-15059346,15060335-15060335,
15060565-15060620,15060969-15061018,15061511-15061580
Length = 834
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Frame = +1
Query: 259 TIARRLT---AAKQSIP--HYQLVATVNVESTLAMRKLVNDKLAA 378
T+A R++ A+ + P HY++ T++ T +R LV KLAA
Sbjct: 277 TMATRISTVFASMREFPRVHYRVAKTIDASVTTTLRDLVPTKLAA 321
>01_05_0740 -
24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 186 GVAAGTGTGSGRYVRGLAP 242
GV AG G G+G Y RG P
Sbjct: 9 GVGAGAGAGAGGYKRGHPP 27
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.132 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,506,241
Number of Sequences: 37544
Number of extensions: 206113
Number of successful extensions: 950
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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