Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_J03
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 87 4e-18
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 61 3e-10
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 30 0.92
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 30 0.92
U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 30 0.92
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 30 0.92
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 30 0.92
U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated ... 30 0.92
AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 30 0.92
AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 30 0.92
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 30 0.92
AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 30 0.92
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 30 0.92
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 6.5
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 27 8.6
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 87.4 bits (207), Expect = 4e-18
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Frame = +1
Query: 49 RIYASPFARRIAELKNFRLGG-QGTGLYGSLKSGDLSDXXXXXXXXXXXXXXXXXXXXXT 225
R+ ASPFA+++A L G G+G G + + DLS
Sbjct: 219 RVSASPFAKKLAAENGLDLSGVSGSGPGGRILASDLSQAPAKGATSTTTQAVSGQD---- 274
Query: 226 FVDLPLSGMRETIARRLTAAKQSIPHYQLVATVNVESTLAMRKLVNDKLAAEKSD--INV 399
+ D+PLS MR+TIA+RLT +K +IPHY L + + +++ L +R+ +N LA S +
Sbjct: 275 YTDIPLSNMRKTIAKRLTESKSTIPHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKI 334
Query: 400 SVNDLIVNAVAATCKRVP 453
S+ND I+ A A C+RVP
Sbjct: 335 SINDFIIKASALACQRVP 352
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 61.3 bits (142), Expect = 3e-10
Identities = 35/75 (46%), Positives = 47/75 (62%)
Frame = +1
Query: 232 DLPLSGMRETIARRLTAAKQSIPHYQLVATVNVESTLAMRKLVNDKLAAEKSDINVSVND 411
D+PLS +R TIA+RLTA+KQ IPH V ++ LA+R+ KL +KS VS+ND
Sbjct: 102 DIPLSNIRATIAKRLTASKQQIPHEYQGVDVRIDDILALRQ----KL--KKSGTAVSLND 155
Query: 412 LIVNAVAATCKRVPT 456
I+ A A + VPT
Sbjct: 156 FIIKAAALALRSVPT 170
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated
protein 11, isoform h protein.
Length = 548
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated
protein 11, isoform e protein.
Length = 467
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 456
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 535
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 548
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 29.9 bits (64), Expect = 0.92
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 235 LPLSGMRETIARRLTAAKQSIPHYQLVATV---NVESTLAMRKLVNDKLAAEKSDINVSV 405
+P + +TI+ RLTAAK S+ QL T+ E +A +K D L ++ NVS+
Sbjct: 12 MPFTTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSI 71
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 228 RGLAP-ERHAGDHRPSPHSRQAKHPALP 308
RG A RH+ RP P S Q HPA P
Sbjct: 414 RGAADGPRHSPASRPRPRSPQQSHPAAP 441
>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
protein B0240.3 protein.
Length = 1093
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 289 QSIPHYQLVATVNVESTLAMRKLVNDKLAAEKSDINV 399
QS+ + +ATV+ LA + ++ DKL +K DIN+
Sbjct: 421 QSLARTKHIATVDQVYVLADKYVMRDKLRYDKIDINL 457
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 250 MRETIARRLTAAKQSIPHYQLVATVN 327
+RET + LTAAKQ +P+ + +N
Sbjct: 458 LRETARQILTAAKQLVPYVSCILNMN 483
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 444 FASRSYRVHDKIVHRNVDVGFLSGELVVDQLP 349
FAS +R +H+N+ +G L L++ Q P
Sbjct: 2028 FASLGHRNPSSTIHQNLHIGNLPSSLLIHQNP 2059
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,084,508
Number of Sequences: 27780
Number of extensions: 134341
Number of successful extensions: 410
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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