Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_J02
         (420 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   4.9  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   6.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 124 WQRVTVLFTVHKFFLGRSLLFCSRNHRTV 38
           W RV +L     FF+   L  C++ + TV
Sbjct: 266 WDRVMLLTFWSAFFIVNVLYICNQCYNTV 294


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 212 ASIKKRKEIFQRAEQYVKEYRIEERD 289
           +S  +R+E  + A  ++K+Y  +  D
Sbjct: 269 SSANRRREFIRSAITFIKQYNFDGMD 294


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 325 ATVTSLSCQSDFITLLDAVFFDILFGSL 242
           A +TS SC++  +   D ++F + F S+
Sbjct: 203 AFITSQSCENATLYSGDEMYFRVAFPSV 230


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 189 RSHSRGVPLPLRRGKKSFREPNNMSKN 269
           R+HS   P   R  KK+F + + ++K+
Sbjct: 70  RTHSGERPYRCRLCKKAFSDSSTLTKH 96


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 189 RSHSRGVPLPLRRGKKSFREPNNMSKN 269
           R+HS   P   R  KK+F + + ++K+
Sbjct: 326 RTHSGERPYRCRLCKKAFSDSSTLTKH 352


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 206 RSASIKKRKEIFQRAE 253
           +SASI K+KE+ +  E
Sbjct: 207 KSASIPKKKEVKEEIE 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,695
Number of Sequences: 336
Number of extensions: 1830
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)